Read the Docs build information Build id: 94606 Project: tiledb-inc-tiledb Version: latest Commit: c9607a4821689abdcc5934606018ef6feeeea145 Date: 2018-03-18T23:20:41.886186Z State: finished Success: True [rtd-command-info] start-time: 2018-03-19T04:20:42.407302Z, end-time: 2018-03-19T04:20:42.414526Z, duration: 0, exit-code: 0 git remote set-url origin https://github.com/TileDB-Inc/TileDB.git [rtd-command-info] start-time: 2018-03-19T04:20:42.476037Z, end-time: 2018-03-19T04:20:43.127159Z, duration: 0, exit-code: 0 git fetch --tags --prune From https://github.com/TileDB-Inc/TileDB x [deleted] (none) -> origin/sp/468 747fa6d..c9607a4 dev -> origin/dev * [new branch] sp/439 -> origin/sp/439 * [new branch] sp/452 -> origin/sp/452 [rtd-command-info] start-time: 2018-03-19T04:20:43.195733Z, end-time: 2018-03-19T04:20:43.204839Z, duration: 0, exit-code: 0 git show-ref remotes/origin/dev c9607a4821689abdcc5934606018ef6feeeea145 refs/remotes/origin/dev [rtd-command-info] start-time: 2018-03-19T04:20:43.276571Z, end-time: 2018-03-19T04:20:43.303768Z, duration: 0, exit-code: 0 git checkout --force origin/dev Previous HEAD position was 747fa6d... Merge pull request #474 from TileDB-Inc/sp/468 HEAD is now at c9607a4... Merge pull request #476 from TileDB-Inc/sp/452 [rtd-command-info] start-time: 2018-03-19T04:20:43.377101Z, end-time: 2018-03-19T04:20:43.489496Z, duration: 0, exit-code: 0 git clean -d -f -f Removing build/ Removing doc/source/gensidebar.pyc [rtd-command-info] start-time: 2018-03-19T04:20:43.599793Z, end-time: 2018-03-19T04:20:43.607600Z, duration: 0, exit-code: 0 git show-ref --tags edb02e3f56ebd70fe7e96f97a1599ca7cbb4b41f refs/tags/0.1.0 bc773aa31c7dbcc3618f3471f5c07a5bb6d52dbd refs/tags/0.2.0 058d9bb071f6a0a38893dd254a616b6594aa8048 refs/tags/0.3.0 40475b0d099c929deaad1f9efe9c0985b080ab0b refs/tags/0.3.1 a5b7de46323ff6f542ccfb053f0076905ae75c2d refs/tags/0.3.2 44c30540426725af0e72131f3959b3ea14047b7b refs/tags/0.3.3 b28795a5e5c7765b4e7607c1c10653013080c22a refs/tags/0.3.4 82ef689b7dd3b9fba51d0c7a29ee679ab895647f refs/tags/0.4.0 a54a7a7203d6d32864f16e04de0c78a5f3d73e7f refs/tags/0.5.0 33ad0355db215cb528162a74c16b706a059b0346 refs/tags/0.5.1 2d1fe95615302d787950af89db0619471e6d3ef8 refs/tags/0.5.2 2d6ce9d87d0da0a89a573acbd83610ecf957be31 refs/tags/0.6.0 106b72ba8558203f90d765f982adbf3743a2cd8c refs/tags/0.6.1 6fa7d91391e740b09210cc3fc8967ba4407e4131 refs/tags/1.0.0 24376e65c9253d335e26e44068d7634d827231af refs/tags/1.1.0 4d1a2054de12b31b37588f27ff791e59204d1030 refs/tags/1.2.0 035bda806d8a81894ed3e90e4f691698f7c8b1ac refs/tags/1.2.1 [rtd-command-info] start-time: 2018-03-19T04:20:43.684036Z, end-time: 2018-03-19T04:20:43.692987Z, duration: 0, exit-code: 0 git branch -r origin/3d_example origin/HEAD -> origin/dev origin/add_bzip2 origin/add_lpthread origin/allocators origin/backport-1.2.1 origin/backport-1.2.2 origin/basic_array origin/benchmarks origin/buffer_fixes origin/bug_real_coords origin/cmake origin/consolidation origin/coords_compression origin/dev origin/double_delta origin/examples origin/exists origin/filter_chunking origin/fix_cmake origin/fixlz4 origin/gdb_fix_cmake origin/generic_tile origin/hyp2dom origin/invalid origin/jcb/389 origin/jcb/cpp_dox_fixes origin/jcb/disable_osx_clangformat2 origin/jcb/disable_osx_format origin/jcb/dlload_libhdfs origin/jcb/docs_brew_backends origin/jcb/hdfs_config origin/jcb/include_cell_num origin/jcb/logger origin/jcb/readthedocs origin/jcb/readthedocs2 origin/jcb/tls_12 origin/jcb/tmp_fix_docs origin/jcb/uri origin/jcb/vfs_closed origin/license origin/master origin/memory origin/metadata_domain_bug origin/missing_env_vars origin/naming origin/new_data_types origin/npapa/s3-filesystem origin/npapa/s3-minio origin/osx_build origin/overflow_bug origin/prettyprint origin/readme origin/refactor origin/release-1.2.0 origin/release-1.2.1 origin/remove_hilbert origin/remove_tiledb_constants origin/remove_workspaces origin/revert-8-jcb/rmdep origin/rg/callback origin/rg/cppapi origin/rg/cppapi-2 origin/rg/cppapi-hide-sfinae origin/rg/cppapi-vs-fix origin/rg/doc-refactor origin/rg/general-types origin/rg/merge-cppapi origin/rm_array_name origin/rm_fragment_filename origin/rm_master_catalog origin/sp/1d origin/sp/272 origin/sp/316 origin/sp/326 origin/sp/332 origin/sp/335 origin/sp/357 origin/sp/433 origin/sp/437 origin/sp/439 origin/sp/442 origin/sp/452 origin/sp/any origin/sp/array_schema origin/sp/array_type origin/sp/brew_fix origin/sp/buffer_sizes origin/sp/cache_overwrite origin/sp/change_capi origin/sp/compile_error origin/sp/config origin/sp/config_error origin/sp/config_iter origin/sp/consolidation origin/sp/cpp_example_dl_issue origin/sp/cppapi origin/sp/dd origin/sp/docs origin/sp/empty_file origin/sp/expose_vfs origin/sp/fix_kv origin/sp/fix_non_empty_api origin/sp/fix_s3 origin/sp/fix_tests origin/sp/frag_rename origin/sp/free origin/sp/get_config origin/sp/gs origin/sp/hdfs_segfault origin/sp/is_kv origin/sp/key_value origin/sp/kv_bug origin/sp/latest_cmake_build origin/sp/license origin/sp/link origin/sp/ls origin/sp/max_buff_size origin/sp/metadata_cache origin/sp/metadata_file_size origin/sp/more_vfs origin/sp/new_ver origin/sp/non_empty origin/sp/non_empty_fix origin/sp/null_extents origin/sp/out_of_bounds origin/sp/rename_some_funcs origin/sp/rm_domain_type origin/sp/rm_dot_dir origin/sp/s3-filesystem origin/sp/safety origin/sp/special_attrs origin/sp/string origin/sp/subqueries origin/sp/tests origin/sp/tile_align origin/sp/tile_cache origin/sp/upper_bound origin/sp/vfs origin/sp/vfs_cache origin/sp/vfs_move_force origin/tile_id_bug origin/tileio origin/ttd/docs-pkg-fix origin/ttd/ingestor-framework origin/ttd/parallel-vfs origin/ttd/rtd-cpp-formatting origin/ttd/s3-benchmark origin/ttd/tiledb_datatype_t origin/ttd/windows-hdfs origin/uri_fixes origin/verificationscripts1 origin/walk origin/working_disable_gnuparallel [rtd-command-info] start-time: 2018-03-19T04:20:45.467282Z, end-time: 2018-03-19T04:22:03.862691Z, duration: 78, exit-code: 0 conda env create --name latest --file /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/conda-env.yml Fetching package metadata ............. 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|###############################| Time: 0:00:00 6.76 MB/s sphinx-1.6.7-p 100% |###############################| Time: 0:00:00 6.75 MB/s breathe-4.7.3- 0% | | ETA: --:--:-- 0.00 B/s breathe-4.7.3- 13% |#### | Time: 0:00:00 30.84 MB/s breathe-4.7.3- 26% |######## | Time: 0:00:00 39.66 MB/s breathe-4.7.3- 40% |############ | Time: 0:00:00 44.52 MB/s breathe-4.7.3- 53% |################ | Time: 0:00:00 47.28 MB/s breathe-4.7.3- 67% |#################### | Time: 0:00:00 49.02 MB/s breathe-4.7.3- 80% |######################## | Time: 0:00:00 50.46 MB/s breathe-4.7.3- 93% |############################# | Time: 0:00:00 51.31 MB/s breathe-4.7.3- 100% |###############################| Time: 0:00:00 49.55 MB/s breathe-4.7.3- 100% |###############################| Time: 0:00:00 46.28 MB/s # # To activate this environment, use: # > source activate latest # # To deactivate an active environment, use: # > source deactivate # [rtd-command-info] start-time: 2018-03-19T04:22:04.040708Z, end-time: 2018-03-19T04:22:26.407695Z, duration: 22, exit-code: 0 conda install --yes --name latest mock pillow sphinx sphinx_rtd_theme Fetching package metadata ............. Solving package specifications: . Package plan for installation in environment /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest: The following NEW packages will be INSTALLED: freetype: 2.8.1-0 conda-forge funcsigs: 1.0.2-py_2 conda-forge jpeg: 9b-2 conda-forge libpng: 1.6.34-0 conda-forge libtiff: 4.0.9-0 conda-forge mock: 2.0.0-py27_0 conda-forge olefile: 0.45.1-py27_0 conda-forge packaging: 17.1-py_0 conda-forge pbr: 3.1.1-py27_0 conda-forge pillow: 5.0.0-py27_0 conda-forge pyparsing: 2.2.0-py27_0 conda-forge sphinx_rtd_theme: 0.2.4-py27_0 conda-forge The following packages will be UPDATED: sphinx: 1.6.7-py27_0 conda-forge --> 1.7.1-py27_0 conda-forge jpeg-9b-2.tar. 0% | | ETA: --:--:-- 0.00 B/s jpeg-9b-2.tar. 1% | | ETA: 0:00:05 209.80 kB/s jpeg-9b-2.tar. 2% | | ETA: 0:00:05 209.27 kB/s jpeg-9b-2.tar. 4% |# | ETA: 0:00:05 209.02 kB/s jpeg-9b-2.tar. 5% |# | ETA: 0:00:03 278.25 kB/s jpeg-9b-2.tar. 7% |## | ETA: 0:00:03 261.01 kB/s jpeg-9b-2.tar. 8% |## | ETA: 0:00:03 250.53 kB/s 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|###############################| Time: 0:00:00 34.15 MB/s pyparsing-2.2. 0% | | ETA: --:--:-- 0.00 B/s pyparsing-2.2. 17% |##### | Time: 0:00:00 31.68 MB/s pyparsing-2.2. 34% |########## | Time: 0:00:00 40.30 MB/s pyparsing-2.2. 51% |################ | Time: 0:00:00 44.48 MB/s pyparsing-2.2. 69% |##################### | Time: 0:00:00 46.84 MB/s pyparsing-2.2. 86% |########################## | Time: 0:00:00 48.68 MB/s pyparsing-2.2. 100% |###############################| Time: 0:00:00 47.68 MB/s pyparsing-2.2. 100% |###############################| Time: 0:00:00 43.75 MB/s sphinx_rtd_the 0% | | ETA: --:--:-- 0.00 B/s sphinx_rtd_the 1% | | Time: 0:00:00 12.59 MB/s sphinx_rtd_the 2% | | Time: 0:00:00 19.79 MB/s sphinx_rtd_the 3% |# | Time: 0:00:00 25.23 MB/s sphinx_rtd_the 4% |# | Time: 0:00:00 27.51 MB/s sphinx_rtd_the 6% |# | Time: 0:00:00 28.61 MB/s sphinx_rtd_the 7% |## | Time: 0:00:00 30.07 MB/s sphinx_rtd_the 8% |## | Time: 0:00:00 31.48 MB/s sphinx_rtd_the 9% |### | Time: 0:00:00 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|###############################| Time: 0:00:00 25.78 MB/s packaging-17.1 100% |###############################| Time: 0:00:00 20.91 MB/s pillow-5.0.0-p 0% | | ETA: --:--:-- 0.00 B/s pillow-5.0.0-p 1% | | Time: 0:00:00 25.56 MB/s pillow-5.0.0-p 3% |# | Time: 0:00:00 30.45 MB/s pillow-5.0.0-p 5% |# | Time: 0:00:00 31.17 MB/s pillow-5.0.0-p 6% |## | Time: 0:00:00 32.72 MB/s pillow-5.0.0-p 8% |## | Time: 0:00:00 33.38 MB/s pillow-5.0.0-p 10% |### | Time: 0:00:00 34.43 MB/s pillow-5.0.0-p 11% |### | Time: 0:00:00 34.49 MB/s pillow-5.0.0-p 13% |#### | Time: 0:00:00 35.05 MB/s pillow-5.0.0-p 15% |#### | Time: 0:00:00 35.29 MB/s pillow-5.0.0-p 16% |##### | Time: 0:00:00 35.82 MB/s pillow-5.0.0-p 18% |##### | Time: 0:00:00 37.08 MB/s pillow-5.0.0-p 20% |###### | Time: 0:00:00 38.12 MB/s pillow-5.0.0-p 21% |###### | Time: 0:00:00 39.17 MB/s pillow-5.0.0-p 23% |####### | Time: 0:00:00 40.21 MB/s pillow-5.0.0-p 25% |####### | Time: 0:00:00 41.17 MB/s pillow-5.0.0-p 26% |######## | Time: 0:00:00 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|################# | Time: 0:00:00 49.67 MB/s pillow-5.0.0-p 56% |################# | Time: 0:00:00 49.94 MB/s pillow-5.0.0-p 58% |################## | Time: 0:00:00 50.22 MB/s pillow-5.0.0-p 60% |################## | Time: 0:00:00 50.47 MB/s pillow-5.0.0-p 61% |################### | Time: 0:00:00 50.73 MB/s pillow-5.0.0-p 63% |################### | Time: 0:00:00 50.95 MB/s pillow-5.0.0-p 65% |#################### | Time: 0:00:00 7.67 MB/s pillow-5.0.0-p 66% |#################### | Time: 0:00:00 7.82 MB/s pillow-5.0.0-p 68% |##################### | Time: 0:00:00 7.99 MB/s pillow-5.0.0-p 70% |##################### | Time: 0:00:00 8.15 MB/s pillow-5.0.0-p 71% |###################### | Time: 0:00:00 8.32 MB/s pillow-5.0.0-p 73% |###################### | Time: 0:00:00 8.48 MB/s pillow-5.0.0-p 75% |####################### | Time: 0:00:00 8.64 MB/s pillow-5.0.0-p 76% |####################### | Time: 0:00:00 8.80 MB/s pillow-5.0.0-p 78% |######################## | Time: 0:00:00 8.97 MB/s 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|###############################| Time: 0:00:00 6.14 MB/s pbr-3.1.1-py27 0% | | ETA: --:--:-- 0.00 B/s pbr-3.1.1-py27 14% |#### | Time: 0:00:00 104.60 kB/s pbr-3.1.1-py27 29% |######### | Time: 0:00:00 104.47 kB/s pbr-3.1.1-py27 43% |############# | Time: 0:00:00 125.31 kB/s pbr-3.1.1-py27 58% |################## | Time: 0:00:00 139.22 kB/s pbr-3.1.1-py27 72% |###################### | Time: 0:00:00 149.11 kB/s pbr-3.1.1-py27 87% |########################### | Time: 0:00:00 156.58 kB/s pbr-3.1.1-py27 100% |###############################| Time: 0:00:00 178.64 kB/s pbr-3.1.1-py27 100% |###############################| Time: 0:00:00 178.58 kB/s mock-2.0.0-py2 0% | | ETA: --:--:-- 0.00 B/s mock-2.0.0-py2 16% |##### | Time: 0:00:00 31.04 MB/s mock-2.0.0-py2 33% |########## | Time: 0:00:00 420.02 kB/s mock-2.0.0-py2 49% |############### | Time: 0:00:00 627.12 kB/s mock-2.0.0-py2 66% |#################### | Time: 0:00:00 418.64 kB/s mock-2.0.0-py2 83% |######################### | Time: 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/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/.cache/pip recommonmark readthedocs-sphinx-ext Collecting recommonmark Using cached recommonmark-0.4.0-py2.py3-none-any.whl Collecting readthedocs-sphinx-ext Using cached readthedocs_sphinx_ext-0.5.8-py2-none-any.whl Collecting commonmark<=0.5.4 (from recommonmark) Requirement already up-to-date: docutils>=0.11 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/python2.7/site-packages (from recommonmark) Collecting nilsimsa>=0.3.7 (from readthedocs-sphinx-ext) Requirement already up-to-date: requests in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/python2.7/site-packages (from readthedocs-sphinx-ext) Requirement already up-to-date: chardet<3.1.0,>=3.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/python2.7/site-packages (from requests->readthedocs-sphinx-ext) Requirement already up-to-date: idna<2.7,>=2.5 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/python2.7/site-packages (from requests->readthedocs-sphinx-ext) Requirement already up-to-date: urllib3<1.23,>=1.21.1 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/python2.7/site-packages (from requests->readthedocs-sphinx-ext) Requirement already up-to-date: certifi>=2017.4.17 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/python2.7/site-packages (from requests->readthedocs-sphinx-ext) Installing collected packages: commonmark, recommonmark, nilsimsa, readthedocs-sphinx-ext Successfully installed commonmark-0.5.4 nilsimsa-0.3.8 readthedocs-sphinx-ext-0.5.8 recommonmark-0.4.0 [rtd-command-info] start-time: 2018-03-19T04:22:29.039058Z, end-time: 2018-03-19T04:22:29.110340Z, duration: 0, exit-code: 0 cat doc/source/conf.py #!/usr/bin/env python3 # -*- coding: utf-8 -*- # # TileDB documentation build configuration file, created by # sphinx-quickstart on Mon Feb 5 10:08:37 2018. # # -- Imports configuration ------------------------------------------------- import os import subprocess import sys from os.path import abspath, join, dirname sys.path.insert(0, abspath(join(dirname(__file__)))) # -- ReadTheDocs configuration --------------------------------------------- # Special handling on ReadTheDocs builds. # Some of this code is from https://github.com/robotpy/robotpy-docs/blob/master/conf.py readthedocs = os.environ.get('READTHEDOCS', None) == 'True' rtd_version = os.environ.get('READTHEDOCS_VERSION', 'latest') rtd_version = rtd_version if rtd_version in ['stable', 'latest'] else 'stable' # On RTD, build the Doxygen XML files. if readthedocs: # Build docs subprocess.check_call(''' mkdir ../../build; cd ../../build; ../bootstrap; make doc; ''', shell=True) # -- General configuration ------------------------------------------------ # If your documentation needs a minimal Sphinx version, state it here. # # needs_sphinx = '1.0' # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [ 'sphinx.ext.autodoc', 'sphinx.ext.intersphinx', 'breathe', ] if readthedocs: # Mapping for linking between RTD subprojects. intersphinx_mapping = { 'tiledb': ('https://tiledb-inc-tiledb.readthedocs-hosted.com/en/%s/' % rtd_version, None), 'tiledb-py': ('https://tiledb-inc-tiledb.readthedocs-hosted.com/projects/python-api/en/%s/' % rtd_version, None) } # Add any paths that contain templates here, relative to this directory. templates_path = ['_templates'] # The suffix(es) of source filenames. source_suffix = '.rst' # The master toctree document. master_doc = 'index' # General information about the project. project = 'TileDB' copyright = '2018 TileDB, Inc' author = 'TileDB, Inc.' # The short X.Y version. version = '1.2' # The full version, including alpha/beta/rc tags. release = '1.2.0' # Breathe extension configuration. tiledb_dir = '../../' doxygen_xml_dir = tiledb_dir + 'build/xml/' breathe_projects = {'TileDB-C': doxygen_xml_dir, 'TileDB-C++': doxygen_xml_dir} breathe_default_project = 'TileDB-C' breathe_projects_source = { 'TileDB-C': (tiledb_dir + 'tiledb/sm/c_api/', ['tiledb.h']), 'TileDB-C++': (tiledb_dir + 'tiledb/sm/cpp_api/', ['tiledb']) } breathe_domain_by_file_pattern = { '*/c_api/tiledb.h': 'c', '*/cpp_api/tiledb': 'cpp' } # The language for content autogenerated by Sphinx. Refer to documentation # for a list of supported languages. # # This is also used if you do content translation via gettext catalogs. # Usually you set "language" from the command line for these cases. language = None # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. # This patterns also effect to html_static_path and html_extra_path exclude_patterns = [] # The name of the Pygments (syntax highlighting) style to use. pygments_style = 'friendly' # If true, `todo` and `todoList` produce output, else they produce nothing. todo_include_todos = False # -- Options for HTML output ---------------------------------------------- html_static_path = ['_static'] html_logo = '_static/tileDB_uppercase_600_112.png' html_favicon = '_static/favicon.ico' if readthedocs: html_theme = 'default' else: import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] # -- Options for HTMLHelp output ------------------------------------------ # Output file base name for HTML help builder. htmlhelp_basename = 'TileDBdoc' # -- Options for LaTeX output --------------------------------------------- latex_elements = { # The paper size ('letterpaper' or 'a4paper'). # # 'papersize': 'letterpaper', # The font size ('10pt', '11pt' or '12pt'). # # 'pointsize': '10pt', # Additional stuff for the LaTeX preamble. # # 'preamble': '', # Latex figure (float) alignment # # 'figure_align': 'htbp', } # Grouping the document tree into LaTeX files. List of tuples # (source start file, target name, title, # author, documentclass [howto, manual, or own class]). latex_documents = [ (master_doc, 'TileDB.tex', 'TileDB Documentation', 'TileDB, Inc.', 'manual'), ] # -- Options for manual page output --------------------------------------- # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ (master_doc, 'tiledb', 'TileDB Documentation', [author], 1) ] # -- Options for Texinfo output ------------------------------------------- # Grouping the document tree into Texinfo files. List of tuples # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ (master_doc, 'TileDB', 'TileDB Documentation', author, 'TileDB', 'One line description of project.', 'Miscellaneous'), ] # -- Custom Document processing ---------------------------------------------- # Generate the sidebar automatically so that it is identical across all subprojects. # This (and gensidebar.py) from https://github.com/robotpy/robotpy-docs import gensidebar gensidebar.generate_sidebar({'on_rtd': readthedocs, 'rtd_version': rtd_version}, 'tiledb') # -- Custom setup ----------------------------------------------------------- def setup(app): app.add_stylesheet('custom.css') ########################################################################### # auto-created readthedocs.org specific configuration # ########################################################################### # # The following code was added during an automated build on readthedocs.org # It is auto created and injected for every build. The result is based on the # conf.py.tmpl file found in the readthedocs.org codebase: # https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl # import sys import os.path from six import string_types from sphinx import version_info # Get suffix for proper linking to GitHub # This is deprecated in Sphinx 1.3+, # as each page can have its own suffix if globals().get('source_suffix', False): if isinstance(source_suffix, string_types): SUFFIX = source_suffix else: SUFFIX = source_suffix[0] else: SUFFIX = '.rst' # Add RTD Static Path. Add to the end because it overwrites previous files. if not 'html_static_path' in globals(): html_static_path = [] if os.path.exists('_static'): html_static_path.append('_static') html_static_path.append('/home/docs/checkouts/readthedocs.org/readthedocs/templates/sphinx/_static') # Add RTD Theme only if they aren't overriding it already using_rtd_theme = False if 'html_theme' in globals(): if html_theme in ['default']: # Allow people to bail with a hack of having an html_style if not 'html_style' in globals(): import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(sphinx_rtd_theme.get_html_theme_path()) else: html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] using_rtd_theme = True else: import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(sphinx_rtd_theme.get_html_theme_path()) else: html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] using_rtd_theme = True if globals().get('websupport2_base_url', False): websupport2_base_url = 'https://readthedocs.com/websupport' if 'http' not in settings.MEDIA_URL: websupport2_static_url = 'https://media.readthedocs.com/' else: websupport2_static_url = 'https://media.readthedocs.com/media//static' #Add project information to the template context. context = { 'using_theme': using_rtd_theme, 'html_theme': html_theme, 'current_version': "latest", 'version_slug': "latest", 'MEDIA_URL': "https://media.readthedocs.com/media/", 'PRODUCTION_DOMAIN': "readthedocs.com", 'versions': [ ("latest", "/en/latest/"), ("stable", "/en/stable/"), ("ttd-docs-pkg-fix", "/en/ttd-docs-pkg-fix/"), ], 'downloads': [ ("pdf", "//readthedocs.com/projects/tiledb-inc-tiledb/downloads/pdf/latest/"), ("htmlzip", "//readthedocs.com/projects/tiledb-inc-tiledb/downloads/htmlzip/latest/"), ("epub", "//readthedocs.com/projects/tiledb-inc-tiledb/downloads/epub/latest/"), ], 'subprojects': [ ("tiledb-inc-tiledb-py", "https://docs.tiledb.io/projects/tiledb-py/en/latest/"), ], 'slug': 'tiledb-inc-tiledb', 'name': u'TileDB', 'rtd_language': u'en', 'programming_language': u'words', 'canonical_url': 'https://docs.tiledb.io/en/latest/', 'analytics_code': '', 'single_version': False, 'conf_py_path': '/doc/source/', 'api_host': 'https://readthedocs.com', 'github_user': 'TileDB-Inc', 'github_repo': 'TileDB', 'github_version': 'dev', 'display_github': True, 'bitbucket_user': 'None', 'bitbucket_repo': 'None', 'bitbucket_version': 'dev', 'display_bitbucket': False, 'gitlab_user': 'None', 'gitlab_repo': 'None', 'gitlab_version': 'dev', 'display_gitlab': False, 'READTHEDOCS': True, 'using_theme': (html_theme == "default"), 'new_theme': (html_theme == "sphinx_rtd_theme"), 'source_suffix': SUFFIX, 'user_analytics_code': '', 'global_analytics_code': 'UA-17997319-2', 'commit': 'c9607a48', } if 'html_context' in globals(): html_context.update(context) else: html_context = context # Add custom RTD extension if 'extensions' in globals(): extensions.append("readthedocs_ext.readthedocs") else: extensions = ["readthedocs_ext.readthedocs"] [rtd-command-info] start-time: 2018-03-19T04:22:29.183318Z, end-time: 2018-03-19T04:22:58.752640Z, duration: 29, exit-code: 0 python /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/bin/sphinx-build -T -E -b readthedocs -d _build/doctrees-readthedocs -D language=en . _build/html Running Sphinx v1.7.1 -- The C compiler identification is GNU 5.4.0 -- The CXX compiler identification is GNU 5.4.0 -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.8") -- Found LZ4: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/liblz4.so -- Found Blosc: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/libblosc.so -- Found Zstandard: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/libzstd.so -- Found Bzip2: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/libbz2.so -- Performing Test COMPILER_SUPPORTS_CXX11 -- Performing Test COMPILER_SUPPORTS_CXX11 - Success -- Compiler supports C++ 2011. -- Not found clang-tidy -- Not found clang-format -- Found Doxygen: /usr/bin/doxygen (found version "1.8.11") found components: doxygen dot -- Configuring done CMake Warning at tiledb/CMakeLists.txt:79 (add_library): Cannot generate a safe runtime search path for target tiledb_shared because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_vfs_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_version_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_unordered_2_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_unordered_1_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_global_1_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_read_subset_incomplete_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_global_2_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_read_ordered_subarray_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_read_global_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_remove_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_async_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_ordered_subarray_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_global_1_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_kv_iter_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_async_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_global_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_create_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_error_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_create_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_kv_read_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_type_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_array_schema_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_subset_incomplete_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_ordered_subarray_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_vfs_read_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_array_consolidate_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_global_2_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_global_subarray_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_kv_write_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_unordered_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_group_create_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_kv_create_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_ls_walk_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_vfs_write_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_config_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_move_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_version_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_unordered_2_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_unordered_1_again_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_unordered_1_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_global_2_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_read_subset_incomplete_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_subset_incomplete_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_async_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_vfs_write_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_map_iter_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_map_write_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_array_consolidate_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_ls_walk_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_vfs_read_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_global_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_ordered_subarray_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_map_read_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_async_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_create_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_read_ordered_subarray_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_read_global_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_config_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_array_schema_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_error_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_global_2_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_vfs_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_global_1_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_global_subarray_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_ordered_subarray_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_global_1_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_create_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_group_create_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_remove_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_unordered_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_map_create_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_type_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_move_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at test/CMakeLists.txt:55 (add_executable): Cannot generate a safe runtime search path for target tiledb_unit because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. -- Generating done -- Build files have been written to: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/build bootstrap success. Run "make" to build, "make check" to test. Scanning dependencies of target doc [ 0%] Preparing for Doxygen documentation [100%] Generating API documentation with Doxygen [100%] Built target doc loading translations [en]... done making output directory... loading intersphinx inventory from https://tiledb-inc-tiledb.readthedocs-hosted.com/projects/python-api/en/latest/objects.inv... WARNING: failed to reach any of the inventories with the following issues: WARNING: intersphinx inventory 'https://tiledb-inc-tiledb.readthedocs-hosted.com/projects/python-api/en/latest/objects.inv' not fetchable due to : ('intersphinx inventory %r not fetchable due to %s: %s', 'https://tiledb-inc-tiledb.readthedocs-hosted.com/projects/python-api/en/latest/objects.inv', , HTTPError(...)) loading intersphinx inventory from https://tiledb-inc-tiledb.readthedocs-hosted.com/en/latest/objects.inv... building [mo]: targets for 0 po files that are out of date building [readthedocs]: targets for 30 source files that are out of date updating environment: 30 added, 0 changed, 0 removed reading sources... [ 3%] c++-api reading sources... [ 6%] c-api reading sources... [ 10%] index reading sources... [ 13%] installation reading sources... [ 16%] introduction reading sources... [ 20%] s3 reading sources... [ 23%] tiledb101/asynchronous-io reading sources... 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[100%] usage /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:78: WARNING: Duplicate declaration. /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:110: WARNING: Duplicate declaration. /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:112: WARNING: Duplicate declaration. /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:114: WARNING: Duplicate declaration. /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:116: WARNING: Duplicate declaration. /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:116: WARNING: Duplicate declaration. /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:118: WARNING: Duplicate declaration. looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... 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WARNING: html_static_path entry '/home/docs/checkouts/readthedocs.org/readthedocs/templates/sphinx/_static' does not exist done copying readthedocs static files... done copying searchtools... done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 10 warnings. The HTML pages are in _build/html. [rtd-command-info] start-time: 2018-03-19T04:22:58.875390Z, end-time: 2018-03-19T04:23:25.885481Z, duration: 27, exit-code: 0 python /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/bin/sphinx-build -T -b json -d _build/doctrees-json -D language=en . _build/json Running Sphinx v1.7.1 mkdir: cannot create directory ‘../../build’: File exists -- Found LZ4: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/liblz4.so -- Found Blosc: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/libblosc.so -- Found Zstandard: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/libzstd.so -- Found Bzip2: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib/libbz2.so -- Compiler supports C++ 2011. -- Not found clang-tidy -- Not found clang-format -- Configuring done CMake Warning at tiledb/CMakeLists.txt:79 (add_library): Cannot generate a safe runtime search path for target tiledb_shared because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_vfs_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_version_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_unordered_2_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_unordered_1_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_global_1_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_read_subset_incomplete_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_global_2_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_read_ordered_subarray_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_read_global_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_remove_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_async_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_ordered_subarray_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_global_1_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_kv_iter_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_async_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_global_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_create_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_error_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_create_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_kv_read_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_type_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_array_schema_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_subset_incomplete_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_ordered_subarray_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_vfs_read_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_array_consolidate_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_global_2_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_global_subarray_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_kv_write_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_unordered_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_group_create_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_kv_create_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_ls_walk_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_vfs_write_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_config_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/c_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_move_c because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/c_api/CMakeLists.txt:63 (build_TileDB_example_capi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_version_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_unordered_2_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_unordered_1_again_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_unordered_1_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_global_2_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_read_subset_incomplete_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_subset_incomplete_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_async_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_vfs_write_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_map_iter_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_map_write_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_array_consolidate_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_ls_walk_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_vfs_read_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_global_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_read_ordered_subarray_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_map_read_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_async_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_create_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_read_ordered_subarray_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_read_global_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_config_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_array_schema_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_error_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_global_2_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_vfs_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_global_1_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_global_subarray_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_ordered_subarray_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_write_global_1_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_sparse_create_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_group_create_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_remove_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_dense_write_unordered_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_map_create_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_type_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at examples/cpp_api/CMakeLists.txt:32 (add_executable): Cannot generate a safe runtime search path for target tiledb_object_move_cpp because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. Call Stack (most recent call first): examples/cpp_api/CMakeLists.txt:64 (build_TileDB_example_cppapi) CMake Warning at test/CMakeLists.txt:55 (add_executable): Cannot generate a safe runtime search path for target tiledb_unit because files in some directories may conflict with libraries in implicit directories: runtime library [libz.so.1] in /usr/lib/x86_64-linux-gnu may be hidden by files in: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/conda/latest/lib Some of these libraries may not be found correctly. -- Generating done -- Build files have been written to: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/build bootstrap success. Run "make" to build, "make check" to test. [100%] Generating API documentation with Doxygen [100%] Built target doc loading translations [en]... done making output directory... loading pickled environment... done loading intersphinx inventory from https://tiledb-inc-tiledb.readthedocs-hosted.com/projects/python-api/en/latest/objects.inv... WARNING: failed to reach any of the inventories with the following issues: WARNING: intersphinx inventory 'https://tiledb-inc-tiledb.readthedocs-hosted.com/projects/python-api/en/latest/objects.inv' not fetchable due to : ('intersphinx inventory %r not fetchable due to %s: %s', 'https://tiledb-inc-tiledb.readthedocs-hosted.com/projects/python-api/en/latest/objects.inv', , HTTPError(...)) building [mo]: targets for 0 po files that are out of date building [json]: targets for 30 source files that are out of date updating environment: 0 added, 2 changed, 0 removed reading sources... [ 50%] c++-api reading sources... [100%] c-api /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:78: WARNING: Duplicate declaration. /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:110: WARNING: Duplicate declaration. /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:112: WARNING: Duplicate declaration. /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:114: WARNING: Duplicate declaration. /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:116: WARNING: Duplicate declaration. /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:116: WARNING: Duplicate declaration. /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb/checkouts/latest/doc/source/c++-api.rst:118: WARNING: Duplicate declaration. looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 3%] c++-api writing output... [ 6%] c-api writing output... [ 10%] index writing output... [ 13%] installation writing output... [ 16%] introduction writing output... [ 20%] s3 writing output... [ 23%] tiledb101/asynchronous-io writing output... [ 26%] tiledb101/basic-concepts writing output... [ 30%] tiledb101/compression writing output... [ 33%] tiledb101/concurrency writing output... [ 36%] tiledb101/consistency writing output... [ 40%] tiledb101/consolidation writing output... [ 43%] tiledb101/data-model writing output... [ 46%] tiledb101/key-value-store writing output... [ 50%] tiledb101/language-bindings writing output... [ 53%] tiledb101/object-management writing output... [ 56%] tiledb101/physical-organization writing output... [ 60%] tiledb101/reading/handling-incomplete-queries writing output... [ 63%] tiledb101/reading/index writing output... [ 66%] tiledb101/reading/reading-dense-arrays writing output... [ 70%] tiledb101/reading/reading-sparse-arrays writing output... [ 73%] tiledb101/reading/utility-functions writing output... [ 76%] tiledb101/storage-backends writing output... [ 80%] tiledb101/system-architecture writing output... [ 83%] tiledb101/updating writing output... [ 86%] tiledb101/virtual-filesystem writing output... [ 90%] tiledb101/writing/index writing output... [ 93%] tiledb101/writing/writing-dense-data writing output... [ 96%] tiledb101/writing/writing-sparse-data writing output... [100%] usage generating indices... genindex writing additional pages... search copying images... [ 4%] tiledb101/Figure_5.png copying images... [ 8%] tiledb101/Figure_7.png copying images... [ 12%] tiledb101/vfs.png copying images... [ 16%] tiledb101/writing/Figure_11.png copying images... [ 20%] tiledb101/reading/Figure_20.png copying images... [ 24%] tiledb101/Figure_1.png copying images... [ 28%] tiledb101/writing/Figure_12.png copying images... [ 32%] tiledb101/Figure_3.png copying images... [ 36%] tiledb101/Figure_2.png copying images... 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WARNING: html_static_path entry '/home/docs/checkouts/readthedocs.org/readthedocs/templates/sphinx/_static' does not exist done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 10 warnings. You can now process the JSON files in _build/json.