Read the Docs build information Build id: 93720 Project: cyverse-ez-quickstart Version: latest Commit: d1fecb8f888e8417605cc9ce1420f8624b68fc75 Date: 2018-03-14T19:24:26.591296Z State: finished Success: False [rtd-command-info] start-time: 2018-03-15T00:24:27.925441Z, end-time: 2018-03-15T00:24:27.936854Z, duration: 0, exit-code: 0 git remote set-url origin https://github.com/CyVerse-learning-materials/ez_quickstart.git [rtd-command-info] start-time: 2018-03-15T00:24:28.039730Z, end-time: 2018-03-15T00:24:28.655540Z, duration: 0, exit-code: 0 git fetch --tags --prune From https://github.com/CyVerse-learning-materials/ez_quickstart b41cf76..d1fecb8 master -> origin/master [rtd-command-info] start-time: 2018-03-15T00:24:28.719221Z, end-time: 2018-03-15T00:24:28.729365Z, duration: 0, exit-code: 0 git show-ref remotes/origin/master d1fecb8f888e8417605cc9ce1420f8624b68fc75 refs/remotes/origin/master [rtd-command-info] start-time: 2018-03-15T00:24:28.791405Z, end-time: 2018-03-15T00:24:28.814763Z, duration: 0, exit-code: 0 git checkout --force origin/master Previous HEAD position was b41cf76... Initial update of EZ jupyterlab HEAD is now at d1fecb8... Update index.rst [rtd-command-info] start-time: 2018-03-15T00:24:28.881216Z, end-time: 2018-03-15T00:24:28.891155Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2018-03-15T00:24:28.956030Z, end-time: 2018-03-15T00:24:28.981653Z, duration: 0, exit-code: 0 git submodule sync [rtd-command-info] start-time: 2018-03-15T00:24:29.045291Z, end-time: 2018-03-15T00:24:29.070907Z, duration: 0, exit-code: 0 git submodule update --init --recursive --force [rtd-command-info] start-time: 2018-03-15T00:24:29.156150Z, end-time: 2018-03-15T00:24:29.164169Z, duration: 0, exit-code: 0 git show-ref --tags [rtd-command-info] start-time: 2018-03-15T00:24:29.227291Z, end-time: 2018-03-15T00:24:29.237148Z, duration: 0, exit-code: 0 git branch -r origin/HEAD -> origin/master origin/master [rtd-command-info] start-time: 2018-03-15T00:24:29.967028Z, end-time: 2018-03-15T00:24:32.318185Z, duration: 2, exit-code: 0 python2.7 -mvirtualenv --no-site-packages --no-download New python executable in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/bin/python2.7 Not overwriting existing python script /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/bin/python (you must use /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/bin/python2.7) Installing setuptools, pip, wheel...done. [rtd-command-info] start-time: 2018-03-15T00:24:32.383552Z, end-time: 2018-03-15T00:24:35.371509Z, duration: 2, exit-code: 0 python pip install --use-wheel --upgrade --cache-dir /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/.cache/pip Pygments==2.2.0 setuptools==37.0.0 docutils==0.13.1 mock==1.0.1 pillow==2.6.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.5.4 recommonmark==0.4.0 sphinx==1.6.5 sphinx-rtd-theme<0.3 readthedocs-sphinx-ext<0.6 Requirement already up-to-date: Pygments==2.2.0 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: setuptools==37.0.0 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: docutils==0.13.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: mock==1.0.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: pillow==2.6.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: alabaster!=0.7.5,<0.8,>=0.7 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: commonmark==0.5.4 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: recommonmark==0.4.0 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: sphinx==1.6.5 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: sphinx-rtd-theme<0.3 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: readthedocs-sphinx-ext<0.6 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages Requirement already up-to-date: sphinxcontrib-websupport in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from sphinx==1.6.5) Requirement already up-to-date: six>=1.5 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from sphinx==1.6.5) Requirement already up-to-date: requests>=2.0.0 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from sphinx==1.6.5) Requirement already up-to-date: typing; python_version < "3.5" in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from sphinx==1.6.5) Requirement already up-to-date: imagesize in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from sphinx==1.6.5) Requirement already up-to-date: babel!=2.0,>=1.3 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from sphinx==1.6.5) Requirement already up-to-date: snowballstemmer>=1.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from sphinx==1.6.5) Requirement already up-to-date: Jinja2>=2.3 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from sphinx==1.6.5) Requirement already up-to-date: nilsimsa>=0.3.7 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from readthedocs-sphinx-ext<0.6) Requirement already up-to-date: urllib3<1.23,>=1.21.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from requests>=2.0.0->sphinx==1.6.5) Requirement already up-to-date: idna<2.7,>=2.5 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from requests>=2.0.0->sphinx==1.6.5) Requirement already up-to-date: chardet<3.1.0,>=3.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from requests>=2.0.0->sphinx==1.6.5) Requirement already up-to-date: certifi>=2017.4.17 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from requests>=2.0.0->sphinx==1.6.5) Requirement already up-to-date: pytz>=0a in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from babel!=2.0,>=1.3->sphinx==1.6.5) Requirement already up-to-date: MarkupSafe>=0.23 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/envs/latest/lib/python2.7/site-packages (from Jinja2>=2.3->sphinx==1.6.5) [rtd-command-info] start-time: 2018-03-15T00:24:35.901528Z, end-time: 2018-03-15T00:24:35.957284Z, duration: 0, exit-code: 0 cat conf.py #!/usr/bin/env python3 # -*- coding: utf-8 -*- # # General information about the project. import sys import os sys.path.insert(0, os.path.dirname(__file__)) from misc.cyverse_sphinx_conf import * # noqa project = 'EZ Installation Quickstart' copyright = '2017, CyVerse' author = 'Blake Joyce' version = '1.0' release = '1.0' epub_title = project epub_author = author epub_publisher = author epub_copyright = copyright ########################################################################### # auto-created readthedocs.org specific configuration # ########################################################################### # # The following code was added during an automated build on readthedocs.org # It is auto created and injected for every build. The result is based on the # conf.py.tmpl file found in the readthedocs.org codebase: # https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl # import sys import os.path from six import string_types from sphinx import version_info # Get suffix for proper linking to GitHub # This is deprecated in Sphinx 1.3+, # as each page can have its own suffix if globals().get('source_suffix', False): if isinstance(source_suffix, string_types): SUFFIX = source_suffix else: SUFFIX = source_suffix[0] else: SUFFIX = '.rst' # Add RTD Static Path. Add to the end because it overwrites previous files. if not 'html_static_path' in globals(): html_static_path = [] if os.path.exists('_static'): html_static_path.append('_static') html_static_path.append('/home/docs/checkouts/readthedocs.org/readthedocs/templates/sphinx/_static') # Add RTD Theme only if they aren't overriding it already using_rtd_theme = False if 'html_theme' in globals(): if html_theme in ['default']: # Allow people to bail with a hack of having an html_style if not 'html_style' in globals(): import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(sphinx_rtd_theme.get_html_theme_path()) else: html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] using_rtd_theme = True else: import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(sphinx_rtd_theme.get_html_theme_path()) else: html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] using_rtd_theme = True if globals().get('websupport2_base_url', False): websupport2_base_url = 'https://readthedocs.com/websupport' if 'http' not in settings.MEDIA_URL: websupport2_static_url = 'https://media.readthedocs.com/' else: websupport2_static_url = 'https://media.readthedocs.com/media//static' #Add project information to the template context. context = { 'using_theme': using_rtd_theme, 'html_theme': html_theme, 'current_version': "latest", 'version_slug': "latest", 'MEDIA_URL': "https://media.readthedocs.com/media/", 'PRODUCTION_DOMAIN': "readthedocs.com", 'versions': [ ("latest", "/en/latest/"), ], 'downloads': [ ("htmlzip", "//readthedocs.com/projects/cyverse-ez-quickstart/downloads/htmlzip/latest/"), ], 'subprojects': [ ], 'slug': 'cyverse-ez-quickstart', 'name': u'ez_quickstart', 'rtd_language': u'en', 'programming_language': u'words', 'canonical_url': 'https://cyverse-ez-quickstart.readthedocs-hosted.com/en/latest/', 'analytics_code': '', 'single_version': False, 'conf_py_path': '/./', 'api_host': 'https://readthedocs.com', 'github_user': 'CyVerse-learning-materials', 'github_repo': 'ez_quickstart', 'github_version': 'master', 'display_github': True, 'bitbucket_user': 'None', 'bitbucket_repo': 'None', 'bitbucket_version': 'master', 'display_bitbucket': False, 'gitlab_user': 'None', 'gitlab_repo': 'None', 'gitlab_version': 'master', 'display_gitlab': False, 'READTHEDOCS': True, 'using_theme': (html_theme == "default"), 'new_theme': (html_theme == "sphinx_rtd_theme"), 'source_suffix': SUFFIX, 'user_analytics_code': '', 'global_analytics_code': 'UA-17997319-2', 'commit': 'd1fecb8f', } if 'html_context' in globals(): html_context.update(context) else: html_context = context # Add custom RTD extension if 'extensions' in globals(): extensions.append("readthedocs_ext.readthedocs") else: extensions = ["readthedocs_ext.readthedocs"] [rtd-command-info] start-time: 2018-03-15T00:24:36.028842Z, end-time: 2018-03-15T00:24:41.229289Z, duration: 5, exit-code: 0 python sphinx-build -T -E -b readthedocs -d _build/doctrees-readthedocs -D language=en . _build/html Running Sphinx v1.6.5 making output directory... loading translations [en]... done building [mo]: targets for 0 po files that are out of date building [readthedocs]: targets for 7 source files that are out of date updating environment: 7 added, 0 changed, 0 removed reading sources... [ 14%] Contributors_maintainers reading sources... [ 28%] License reading sources... [ 42%] README reading sources... [ 57%] docker reading sources... [ 71%] index reading sources... [ 85%] rstudio reading sources... [100%] slides/README /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:7: WARNING: Duplicate explicit target name: "request access". /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:58: WARNING: Error parsing content block for the "list-table" directive: uniform two-level bullet list expected, but row 3 does not contain the same number of items as row 1 (1 vs 3). .. list-table:: :header-rows: 1 * - Prerequisite - Preparation/Notes - Link/Download * - CyVerse account - You will need a CyVerse account to complete this exercise - `Register `_ * - Atmosphere Access - `Request Access `_ * - Jetstream Access - `Request Access `_ /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:99: WARNING: Error parsing content block for the "list-table" directive: uniform two-level bullet list expected, but row 2 does not contain the same number of items as row 1 (1 vs 2). .. list-table:: :header-rows: 1 * - A running Atmosphere instance using a featured image. - Notes * - `A running Atmosphere or Jetstream Image `__ /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:113: WARNING: Title underline too short. *EZ Install Anaconda (Jupyter, Jupyter Hub, Jupyter Lab)* ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:7: WARNING: Duplicate explicit target name: "atmosphere". /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:143: WARNING: Title underline too short. *Connect to an Atmosphere instance running a Jupyter Notebook* ````````````````````````````````````````````````````````````` /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/rstudio.rst:18: WARNING: Bullet list ends without a blank line; unexpected unindent. /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/rstudio.rst:21: WARNING: Bullet list ends without a blank line; unexpected unindent. /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/rstudio.rst:24: WARNING: Bullet list ends without a blank line; unexpected unindent. /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/rstudio.rst:31: WARNING: Unknown directive type "Ubuntu". .. Ubuntu:: - In a terminal, reset the symbolic link for `libfortran.so`: ``sudo ln -s /usr/lib/x86_64-linux-gnu/libgfortran.so.3 /usr/lib/libgfortran.so`` - Install Dependencies ``sudo apt-get install gdebi-core g++`` - Change to the `/opt` folder ``cd /opt`` ``sudo wget https://download2.rstudio.org/rstudio-server-1.0.153-amd64.deb`` ``sudo gdebi -n rstudio-server-1.0.153-amd64.deb`` /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/rstudio.rst:45: WARNING: Unknown directive type "Centos". .. Centos:: ``cd /opt`` ``sudo wget https://download2.rstudio.org/rstudio-server-rhel-1.0.153-x86_64.rpm`` ``sudo yum install --nogpgcheck rstudio-server-rhel-1.0.153-x86_64.rpm`` looking for now-outdated files... none found pickling environment... done checking consistency... /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/Contributors_maintainers.md: WARNING: document isn't included in any toctree /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/License.md: WARNING: document isn't included in any toctree /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/README.md: WARNING: document isn't included in any toctree /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/slides/README.md: WARNING: document isn't included in any toctree done preparing documents... done writing output... [ 14%] Contributors_maintainers writing output... [ 28%] License writing output... [ 42%] README writing output... [ 57%] docker writing output... [ 71%] index writing output... [ 85%] rstudio writing output... [100%] slides/README generating indices... genindex writing additional pages... search copying images... [ 50%] ./img/homeicon.png copying images... [100%] ./img/cyverse_rgb.png copying static files... WARNING: html_static_path entry u'/home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/_static' does not exist WARNING: html_static_path entry '/home/docs/checkouts/readthedocs.org/readthedocs/templates/sphinx/_static' does not exist done copying readthedocs static files... done copying searchtools... done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 17 warnings. [rtd-command-info] start-time: 2018-03-15T00:24:41.361096Z, end-time: 2018-03-15T00:24:42.590753Z, duration: 1, exit-code: 0 python sphinx-build -T -b json -d _build/doctrees-json -D language=en . _build/json Running Sphinx v1.6.5 making output directory... loading translations [en]... done loading pickled environment... done building [mo]: targets for 0 po files that are out of date building [json]: targets for 7 source files that are out of date updating environment: 0 added, 1 changed, 0 removed reading sources... [100%] index /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:7: WARNING: Duplicate explicit target name: "request access". /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:58: WARNING: Error parsing content block for the "list-table" directive: uniform two-level bullet list expected, but row 3 does not contain the same number of items as row 1 (1 vs 3). .. list-table:: :header-rows: 1 * - Prerequisite - Preparation/Notes - Link/Download * - CyVerse account - You will need a CyVerse account to complete this exercise - `Register `_ * - Atmosphere Access - `Request Access `_ * - Jetstream Access - `Request Access `_ /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:99: WARNING: Error parsing content block for the "list-table" directive: uniform two-level bullet list expected, but row 2 does not contain the same number of items as row 1 (1 vs 2). .. list-table:: :header-rows: 1 * - A running Atmosphere instance using a featured image. - Notes * - `A running Atmosphere or Jetstream Image `__ /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:113: WARNING: Title underline too short. *EZ Install Anaconda (Jupyter, Jupyter Hub, Jupyter Lab)* ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:7: WARNING: Duplicate explicit target name: "atmosphere". /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:143: WARNING: Title underline too short. *Connect to an Atmosphere instance running a Jupyter Notebook* ````````````````````````````````````````````````````````````` looking for now-outdated files... none found pickling environment... done checking consistency... /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/Contributors_maintainers.md: WARNING: document isn't included in any toctree /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/License.md: WARNING: document isn't included in any toctree /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/README.md: WARNING: document isn't included in any toctree /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/slides/README.md: WARNING: document isn't included in any toctree done preparing documents... done writing output... [ 14%] Contributors_maintainers writing output... [ 28%] License writing output... [ 42%] README writing output... [ 57%] docker writing output... [ 71%] index writing output... [ 85%] rstudio writing output... [100%] slides/README generating indices... genindex writing additional pages... search copying images... [ 50%] ./img/homeicon.png copying images... [100%] ./img/cyverse_rgb.png copying static files... WARNING: html_static_path entry u'/home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/_static' does not exist WARNING: html_static_path entry '/home/docs/checkouts/readthedocs.org/readthedocs/templates/sphinx/_static' does not exist done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 12 warnings. [rtd-command-info] start-time: 2018-03-15T00:24:42.782414Z, end-time: 2018-03-15T00:24:43.852450Z, duration: 1, exit-code: 0 python sphinx-build -T -b readthedocssinglehtmllocalmedia -d _build/doctrees-readthedocssinglehtmllocalmedia -D language=en . _build/localmedia Running Sphinx v1.6.5 making output directory... loading translations [en]... done loading pickled environment... done building [mo]: targets for 0 po files that are out of date building [readthedocssinglehtmllocalmedia]: all documents updating environment: 0 added, 1 changed, 0 removed reading sources... [100%] index /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:7: WARNING: Duplicate explicit target name: "request access". /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:58: WARNING: Error parsing content block for the "list-table" directive: uniform two-level bullet list expected, but row 3 does not contain the same number of items as row 1 (1 vs 3). .. list-table:: :header-rows: 1 * - Prerequisite - Preparation/Notes - Link/Download * - CyVerse account - You will need a CyVerse account to complete this exercise - `Register `_ * - Atmosphere Access - `Request Access `_ * - Jetstream Access - `Request Access `_ /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:99: WARNING: Error parsing content block for the "list-table" directive: uniform two-level bullet list expected, but row 2 does not contain the same number of items as row 1 (1 vs 2). .. list-table:: :header-rows: 1 * - A running Atmosphere instance using a featured image. - Notes * - `A running Atmosphere or Jetstream Image `__ /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:113: WARNING: Title underline too short. *EZ Install Anaconda (Jupyter, Jupyter Hub, Jupyter Lab)* ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:7: WARNING: Duplicate explicit target name: "atmosphere". /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/index.rst:143: WARNING: Title underline too short. *Connect to an Atmosphere instance running a Jupyter Notebook* ````````````````````````````````````````````````````````````` looking for now-outdated files... none found pickling environment... done checking consistency... /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/Contributors_maintainers.md: WARNING: document isn't included in any toctree /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/License.md: WARNING: document isn't included in any toctree /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/README.md: WARNING: document isn't included in any toctree /home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/slides/README.md: WARNING: document isn't included in any toctree done preparing documents... done assembling single document... rstudio docker writing... done writing additional files... copying images... [ 50%] ./img/homeicon.png copying images... [100%] ./img/cyverse_rgb.png copying static files... WARNING: html_static_path entry u'/home/docs/checkouts/readthedocs.org/user_builds/cyverse-ez-quickstart/checkouts/latest/_static' does not exist WARNING: html_static_path entry '/home/docs/checkouts/readthedocs.org/readthedocs/templates/sphinx/_static' does not exist done copying readthedocs static files... done copying extra files... done dumping object inventory... done build succeeded, 12 warnings.