Read the Docs build information
Build id: 920572
Project: beliveau-lab-tigerfish
Version: latest
Commit: 9e57000a520401893ef7da3f301df027e9432671
Date: 2022-04-19T02:31:34.035756Z
State: finished
Success: False


[rtd-command-info] start-time: 2022-04-19T02:31:35.977368Z, end-time: 2022-04-19T02:31:38.156314Z, duration: 2, exit-code: 0
git clone --no-single-branch --depth 50 git@github.com:beliveau-lab/TigerFISH.git .
Cloning into '.'...
Warning: Permanently added 'github.com,192.30.255.113' (ECDSA) to the list of known hosts.

[rtd-command-info] start-time: 2022-04-19T02:31:38.382058Z, end-time: 2022-04-19T02:31:38.742643Z, duration: 0, exit-code: 0
git checkout --force origin/master
Note: switching to 'origin/master'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at 9e57000 updated config

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git clean -d -f -f


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python3.7 -mvirtualenv 
Using base prefix '/home/docs/.pyenv/versions/3.7.9'
New python executable in /home/docs/checkouts/readthedocs.org/user_builds/beliveau-lab-tigerfish/envs/latest/bin/python3.7
Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/beliveau-lab-tigerfish/envs/latest/bin/python
Installing setuptools, pip, wheel...
done.

[rtd-command-info] start-time: 2022-04-19T02:31:44.711195Z, end-time: 2022-04-19T02:31:46.558429Z, duration: 1, exit-code: 0
python -m pip install --upgrade --no-cache-dir pip setuptools<58.3.0
Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/beliveau-lab-tigerfish/envs/latest/lib/python3.7/site-packages (22.0.4)
Collecting setuptools<58.3.0
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Installing collected packages: setuptools
  Attempting uninstall: setuptools
    Found existing installation: setuptools 62.1.0
    Uninstalling setuptools-62.1.0:
      Successfully uninstalled setuptools-62.1.0
Successfully installed setuptools-58.2.0

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python -m pip install --upgrade --no-cache-dir mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx sphinx-rtd-theme readthedocs-sphinx-ext<2.2
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Collecting Jinja2>=2.3
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Collecting packaging
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Collecting docutils>=0.11
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Building wheels for collected packages: mock, future
  Building wheel for mock (setup.py): started
  Building wheel for mock (setup.py): finished with status 'done'
  Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23773 sha256=6594e4f456380279de073ed2d6cce4c9a9333071ac5b47a63b63382c6c927cbc
  Stored in directory: /tmp/pip-ephem-wheel-cache-93w0q4ag/wheels/7a/94/b1/0fdc5339a5bd487a5cc15421ec200d9ba3e2aa7190e4a727f1
  Building wheel for future (setup.py): started
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  Created wheel for future: filename=future-0.18.2-py3-none-any.whl size=491070 sha256=519e9260cda96a6101a9c0570d0322517b13d9d56f659774e954554de9658c5d
  Stored in directory: /tmp/pip-ephem-wheel-cache-93w0q4ag/wheels/56/b0/fe/4410d17b32f1f0c3cf54cdfb2bc04d7b4b8f4ae377e2229ba0
Successfully built mock future
Installing collected packages: snowballstemmer, pytz, mock, certifi, alabaster, zipp, urllib3, typing-extensions, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, pyparsing, Pygments, pillow, MarkupSafe, imagesize, idna, future, docutils, charset-normalizer, babel, requests, packaging, Jinja2, importlib-metadata, commonmark, sphinx, readthedocs-sphinx-ext, sphinx-rtd-theme, recommonmark
Successfully installed Jinja2-3.1.1 MarkupSafe-2.1.1 Pygments-2.11.2 alabaster-0.7.12 babel-2.9.1 certifi-2021.10.8 charset-normalizer-2.0.12 commonmark-0.8.1 docutils-0.17.1 future-0.18.2 idna-3.3 imagesize-1.3.0 importlib-metadata-4.11.3 mock-1.0.1 packaging-21.3 pillow-5.4.1 pyparsing-3.0.8 pytz-2022.1 readthedocs-sphinx-ext-2.1.5 recommonmark-0.5.0 requests-2.27.1 snowballstemmer-2.2.0 sphinx-4.5.0 sphinx-rtd-theme-1.0.0 sphinxcontrib-applehelp-1.0.2 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-htmlhelp-2.0.0 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-1.0.3 sphinxcontrib-serializinghtml-1.1.5 typing-extensions-4.2.0 urllib3-1.26.9 zipp-3.8.0

[rtd-command-info] start-time: 2022-04-19T02:31:55.424261Z, end-time: 2022-04-19T02:31:57.972894Z, duration: 2, exit-code: 1
python -m pip install --upgrade --upgrade-strategy eager --no-cache-dir .[docs]
Processing /home/docs/checkouts/readthedocs.org/user_builds/beliveau-lab-tigerfish/checkouts/latest
  Preparing metadata (setup.py): started
  Preparing metadata (setup.py): finished with status 'done'
Collecting numpy>=1.18.1
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ERROR: Could not find a version that satisfies the requirement nupack>=4 (from tigerfish[docs]) (from versions: none)
ERROR: No matching distribution found for nupack>=4