Read the Docs build information
Build id: 844445
Project: mdolab-openaerostruct
Version: latest
Commit: 95d0a0f5075527fe3c326b01712424d42b32ae68
Date: 2022-02-04T18:41:51.451466Z
State: finished
Success: True


[rtd-command-info] start-time: 2022-02-04T18:41:53.375480Z, end-time: 2022-02-04T18:41:55.862289Z, duration: 2, exit-code: 0
git clone --no-single-branch --depth 50 https://github.com/mdolab/OpenAeroStruct.git .
Cloning into '.'...

[rtd-command-info] start-time: 2022-02-04T18:41:56.055717Z, end-time: 2022-02-04T18:41:56.182692Z, duration: 0, exit-code: 0
git checkout --force origin/master
Note: checking out 'origin/master'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by performing another checkout.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -b with the checkout command again. Example:

  git checkout -b <new-branch-name>

HEAD is now at 95d0a0f Updating to Read-the-docs and Codecov (#376)

[rtd-command-info] start-time: 2022-02-04T18:41:56.387066Z, end-time: 2022-02-04T18:41:56.459450Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2022-02-04T18:41:57.625480Z, end-time: 2022-02-04T18:42:03.571896Z, duration: 5, exit-code: 0
python3.7 -mvirtualenv --system-site-packages 
Using base prefix '/home/docs/.pyenv/versions/3.7.9'
New python executable in /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openaerostruct/envs/latest/bin/python3.7
Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openaerostruct/envs/latest/bin/python
Installing setuptools, pip, wheel...
done.

[rtd-command-info] start-time: 2022-02-04T18:42:03.778229Z, end-time: 2022-02-04T18:42:06.878780Z, duration: 3, exit-code: 0
python -m pip install --upgrade --no-cache-dir pip<=21.3.1 setuptools<58.3.0
Collecting pip<=21.3.1
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Installing collected packages: setuptools, pip
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Successfully installed pip-21.3.1 setuptools-58.2.0

[rtd-command-info] start-time: 2022-02-04T18:42:07.051841Z, end-time: 2022-02-04T18:42:16.475539Z, duration: 9, exit-code: 0
python -m pip install --upgrade --no-cache-dir -I mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx sphinx-rtd-theme readthedocs-sphinx-ext<2.2 setuptools<58.3.0
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Building wheels for collected packages: mock, future
  Building wheel for mock (setup.py): started
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  Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23773 sha256=c06fce7f018497d41e4ff1eb38d5f366551e4dce82cb2e38e2d2533fbe3faa6f
  Stored in directory: /tmp/pip-ephem-wheel-cache-dstsnl8x/wheels/7a/94/b1/0fdc5339a5bd487a5cc15421ec200d9ba3e2aa7190e4a727f1
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Successfully built mock future
Installing collected packages: zipp, urllib3, typing-extensions, pytz, pyparsing, MarkupSafe, idna, charset-normalizer, certifi, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, snowballstemmer, requests, Pygments, packaging, Jinja2, importlib-metadata, imagesize, future, docutils, babel, alabaster, sphinx, commonmark, sphinx-rtd-theme, setuptools, recommonmark, readthedocs-sphinx-ext, pillow, mock
ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
matplotlib 3.3.2 requires pillow>=6.2.0, but you have pillow 5.4.1 which is incompatible.
Successfully installed Jinja2-3.0.3 MarkupSafe-2.0.1 Pygments-2.11.2 alabaster-0.7.12 babel-2.9.1 certifi-2021.10.8 charset-normalizer-2.0.11 commonmark-0.8.1 docutils-0.17.1 future-0.18.2 idna-3.3 imagesize-1.3.0 importlib-metadata-4.10.1 mock-1.0.1 packaging-21.3 pillow-5.4.1 pyparsing-3.0.7 pytz-2021.3 readthedocs-sphinx-ext-2.1.4 recommonmark-0.5.0 requests-2.27.1 setuptools-58.2.0 snowballstemmer-2.2.0 sphinx-4.4.0 sphinx-rtd-theme-1.0.0 sphinxcontrib-applehelp-1.0.2 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-htmlhelp-2.0.0 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-1.0.3 sphinxcontrib-serializinghtml-1.1.5 typing-extensions-4.0.1 urllib3-1.26.8 zipp-3.7.0
WARNING: You are using pip version 21.3.1; however, version 22.0.3 is available.
You should consider upgrading via the '/home/docs/checkouts/readthedocs.org/user_builds/mdolab-openaerostruct/envs/latest/bin/python -m pip install --upgrade pip' command.

[rtd-command-info] start-time: 2022-02-04T18:42:16.726831Z, end-time: 2022-02-04T18:42:35.808380Z, duration: 19, exit-code: 0
python -m pip install --upgrade --upgrade-strategy eager --no-cache-dir .[docs]
Processing /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openaerostruct/checkouts/latest
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Collecting openmdao<=3.16.0,>=3.2
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Collecting latexcodec>=1.0.4
  Downloading latexcodec-2.0.1-py2.py3-none-any.whl (18 kB)
Building wheels for collected packages: openmdao, openaerostruct, pyDOE2
  Building wheel for openmdao (setup.py): started
  Building wheel for openmdao (setup.py): finished with status 'done'
  Created wheel for openmdao: filename=openmdao-3.16.0-py3-none-any.whl size=5662762 sha256=9413b6bd9a7f82640ad17daf1cdc44f2b9b41f1c81fcc016240bd506cbbb79b1
  Stored in directory: /tmp/pip-ephem-wheel-cache-hy5cpt7a/wheels/d9/83/bc/fb081f223bde6e5fde8e1f03b5f0cc0225db7b5d29543a81d6
  Building wheel for openaerostruct (setup.py): started
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  Created wheel for openaerostruct: filename=openaerostruct-2.3.2-py3-none-any.whl size=373415 sha256=499d7fb9576de0f53f02abbb6d482f7ebcba314a14c4695cb6aafec3a9c239d4
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  Stored in directory: /tmp/pip-ephem-wheel-cache-hy5cpt7a/wheels/49/91/2d/d08e80806bf7756193541f6c03c0492af288fcd6158d3d0998
Successfully built openmdao openaerostruct pyDOE2
Installing collected packages: six, pyyaml, numpy, latexcodec, scipy, pybtex, python-dateutil, pyDOE2, pybtex-docutils, pillow, networkx, kiwisolver, fonttools, cycler, sphinxcontrib-bibtex, sphinxcontrib-autoprogram, sphinx-prompt, sphinx-copybutton, openmdao, numpydoc, matplotlib, sphinx-mdolab-theme, openaerostruct
  Attempting uninstall: six
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Successfully installed cycler-0.11.0 fonttools-4.29.1 kiwisolver-1.3.2 latexcodec-2.0.1 matplotlib-3.5.1 networkx-2.6.3 numpy-1.21.5 numpydoc-1.2 openaerostruct-2.3.2 openmdao-3.16.0 pillow-9.0.1 pyDOE2-1.3.0 pybtex-0.24.0 pybtex-docutils-1.0.1 python-dateutil-2.8.2 pyyaml-6.0 scipy-1.7.3 six-1.16.0 sphinx-copybutton-0.4.0 sphinx-mdolab-theme-1.3.8 sphinx-prompt-1.5.0 sphinxcontrib-autoprogram-0.1.7 sphinxcontrib-bibtex-2.4.1
WARNING: You are using pip version 21.3.1; however, version 22.0.3 is available.
You should consider upgrading via the '/home/docs/checkouts/readthedocs.org/user_builds/mdolab-openaerostruct/envs/latest/bin/python -m pip install --upgrade pip' command.

[rtd-command-info] start-time: 2022-02-04T18:42:37.099436Z, end-time: 2022-02-04T18:42:37.173863Z, duration: 0, exit-code: 0
cat openaerostruct/docs/conf.py
# -*- coding: utf-8 -*-
# This file is execfile()d with the current directory set to its
# containing dir.
import os
import sys
import importlib
from unittest.mock import Mock
from openaerostruct.docs._exts import embed_n2
from openaerostruct.docs._utils.generate_sourcedocs import generate_docs
from sphinx_mdolab_theme.config import *

sys.path.insert(0, os.path.abspath(".."))
sys.path.insert(0, os.path.abspath("."))
sys.path.insert(0, os.path.join("./_exts"))

# Only mock the ones that don't import.
MOCK_MODULES = ["h5py", "petsc4py", "pyoptsparse", "pyDOE2"]
for mod_name in MOCK_MODULES:
    try:
        importlib.import_module(mod_name)
    except ImportError:
        sys.modules[mod_name] = Mock()

# --- General configuration ---

# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
    "sphinx.ext.autodoc",
    "sphinx.ext.doctest",
    "sphinx.ext.coverage",
    "sphinx.ext.mathjax",
    "sphinx.ext.viewcode",
    "sphinx.ext.githubpages",
    "numpydoc",
    "sphinx_copybutton",
    "embed_n2",
]

# directories for which to generate sourcedocs
packages = [
    "aerodynamics",
    "functionals",
    "geometry",
    "integration",
    "structures",
    "transfer",
]

generate_docs("..", "../..", packages, project_name="openaerostruct")

# If your documentation needs a minimal Sphinx version, state it here.
needs_sphinx = "1.6.2"

numpydoc_show_class_members = False

# General information about the project.
project = "OpenAeroStruct"
copyright = "2018, John Jasa, Dr. John Hwang, Justin S. Gray"
author = "John Jasa, Dr. John Hwang, Justin S. Gray"

# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.

import re

__version__ = re.findall(
    r"""__version__ = ["']+([0-9\.]*)["']+""",
    open("../__init__.py").read(),
)[0]

# The short X.Y version.
version = __version__

# The full version, including alpha/beta/rc tags.
release = __version__

# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,
# using the given strftime format.
html_last_updated_fmt = "%b %d, %Y"

# Output file base name for HTML help builder.
htmlhelp_basename = "OpenAeroStructdoc"

html_extra_path = ["_n2html"]

# The master toctree document.
master_doc = "index"

# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [(master_doc, "openaerostruct", "OpenAeroStruct Documentation", [author], 1)]




###########################################################################
#          auto-created readthedocs.org specific configuration            #
###########################################################################


#
# The following code was added during an automated build on readthedocs.org
# It is auto created and injected for every build. The result is based on the
# conf.py.tmpl file found in the readthedocs.org codebase:
# https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl
#
# Note: this file shouldn't rely on extra dependencies.

import importlib
import sys
import os.path

# Borrowed from six.
PY3 = sys.version_info[0] == 3
string_types = str if PY3 else basestring

from sphinx import version_info

# Get suffix for proper linking to GitHub
# This is deprecated in Sphinx 1.3+,
# as each page can have its own suffix
if globals().get('source_suffix', False):
    if isinstance(source_suffix, string_types):
        SUFFIX = source_suffix
    elif isinstance(source_suffix, (list, tuple)):
        # Sphinx >= 1.3 supports list/tuple to define multiple suffixes
        SUFFIX = source_suffix[0]
    elif isinstance(source_suffix, dict):
        # Sphinx >= 1.8 supports a mapping dictionary for multiple suffixes
        SUFFIX = list(source_suffix.keys())[0]  # make a ``list()`` for py2/py3 compatibility
    else:
        # default to .rst
        SUFFIX = '.rst'
else:
    SUFFIX = '.rst'

# Add RTD Static Path. Add to the end because it overwrites previous files.
if not 'html_static_path' in globals():
    html_static_path = []
if os.path.exists('_static'):
    html_static_path.append('_static')

# Add RTD Theme only if they aren't overriding it already
using_rtd_theme = (
    (
        'html_theme' in globals() and
        html_theme in ['default'] and
        # Allow people to bail with a hack of having an html_style
        'html_style' not in globals()
    ) or 'html_theme' not in globals()
)
if using_rtd_theme:
    theme = importlib.import_module('sphinx_rtd_theme')
    html_theme = 'sphinx_rtd_theme'
    html_style = None
    html_theme_options = {}
    if 'html_theme_path' in globals():
        html_theme_path.append(theme.get_html_theme_path())
    else:
        html_theme_path = [theme.get_html_theme_path()]

if globals().get('websupport2_base_url', False):
    websupport2_base_url = 'https://readthedocs.com/websupport'
    websupport2_static_url = 'https://assets.readthedocs.com/'


#Add project information to the template context.
context = {
    'using_theme': using_rtd_theme,
    'html_theme': html_theme,
    'current_version': "latest",
    'version_slug': "latest",
    'MEDIA_URL': "https://media.readthedocs.com/media/",
    'STATIC_URL': "https://assets.readthedocs.com/",
    'PRODUCTION_DOMAIN': "readthedocs.com",
    'versions': [
    ("latest", "/en/latest/"),
    ],
    'downloads': [ 
    ],
    'subprojects': [ 
    ],
    'slug': 'mdolab-openaerostruct',
    'name': u'OpenAeroStruct',
    'rtd_language': u'en',
    'programming_language': u'py',
    'canonical_url': 'https://mdolab-openaerostruct.readthedocs-hosted.com/en/latest/',
    'analytics_code': 'None',
    'single_version': False,
    'conf_py_path': '/openaerostruct/docs/',
    'api_host': 'https://readthedocs.com',
    'github_user': 'mdolab',
    'proxied_api_host': '/_',
    'github_repo': 'OpenAeroStruct',
    'github_version': 'master',
    'display_github': True,
    'bitbucket_user': 'None',
    'bitbucket_repo': 'None',
    'bitbucket_version': 'master',
    'display_bitbucket': False,
    'gitlab_user': 'None',
    'gitlab_repo': 'None',
    'gitlab_version': 'master',
    'display_gitlab': False,
    'READTHEDOCS': True,
    'using_theme': (html_theme == "default"),
    'new_theme': (html_theme == "sphinx_rtd_theme"),
    'source_suffix': SUFFIX,
    'ad_free': False,
    'docsearch_disabled': False,
    'user_analytics_code': '',
    'global_analytics_code': 'UA-17997319-2',
    'commit': '95d0a0f5',
}

# For sphinx >=1.8 we can use html_baseurl to set the canonical URL.
# https://www.sphinx-doc.org/en/master/usage/configuration.html#confval-html_baseurl
if version_info >= (1, 8):
    if not globals().get('html_baseurl'):
        html_baseurl = context['canonical_url']
    context['canonical_url'] = None





if 'html_context' in globals():
    
    html_context.update(context)
    
else:
    html_context = context

# Add custom RTD extension
if 'extensions' in globals():
    # Insert at the beginning because it can interfere
    # with other extensions.
    # See https://github.com/rtfd/readthedocs.org/pull/4054
    extensions.insert(0, "readthedocs_ext.readthedocs")
else:
    extensions = ["readthedocs_ext.readthedocs"]

# Add External version warning banner to the external version documentation
if 'branch' == 'external':
    extensions.insert(1, "readthedocs_ext.external_version_warning")
    readthedocs_vcs_url = 'None'
    readthedocs_build_url = 'https://readthedocs.com/projects/mdolab-openaerostruct/builds/844445/'

project_language = 'en'

# User's Sphinx configurations
language_user = globals().get('language', None)
latex_engine_user = globals().get('latex_engine', None)
latex_elements_user = globals().get('latex_elements', None)

# Remove this once xindy gets installed in Docker image and XINDYOPS
# env variable is supported
# https://github.com/rtfd/readthedocs-docker-images/pull/98
latex_use_xindy = False

chinese = any([
    language_user in ('zh_CN', 'zh_TW'),
    project_language in ('zh_CN', 'zh_TW'),
])

japanese = any([
    language_user == 'ja',
    project_language == 'ja',
])

if chinese:
    latex_engine = latex_engine_user or 'xelatex'

    latex_elements_rtd = {
        'preamble': '\\usepackage[UTF8]{ctex}\n',
    }
    latex_elements = latex_elements_user or latex_elements_rtd
elif japanese:
    latex_engine = latex_engine_user or 'platex'

# Make sure our build directory is always excluded
exclude_patterns = globals().get('exclude_patterns', [])
exclude_patterns.extend(['_build'])

[rtd-command-info] start-time: 2022-02-04T18:42:37.352347Z, end-time: 2022-02-04T18:43:31.901964Z, duration: 54, exit-code: 0
python -m sphinx -T -E -b html -d _build/doctrees -D language=en . _build/html
Running Sphinx v4.4.0
loading translations [en]... done
making output directory... done
[autosummary] generating autosummary for: _srcdocs/index.rst, _srcdocs/packages/aerodynamics/aero_groups.rst, _srcdocs/packages/aerodynamics/coeffs.rst, _srcdocs/packages/aerodynamics/collocation_points.rst, _srcdocs/packages/aerodynamics/compressible_states.rst, _srcdocs/packages/aerodynamics/convert_velocity.rst, _srcdocs/packages/aerodynamics/eval_mtx.rst, _srcdocs/packages/aerodynamics/eval_velocities.rst, _srcdocs/packages/aerodynamics/functionals.rst, _srcdocs/packages/aerodynamics/geometry.rst, ..., more_examples/multipoint.rst, quick_example.rst, specialty_topics.rst, struct_example.rst, tutorials/customizing_prob_setup.rst, tutorials/debugging_tips.rst, tutorials/geometry_manipulation.rst, tutorials/ground_effect.rst, tutorials/openconcept_coupling.rst, v1_v2_conversion.rst
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 114 source files that are out of date
updating environment: [new config] 114 added, 0 changed, 0 removed
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