Read the Docs build information Build id: 837654 Project: institute-for-disease-modeling-emodpy-malaria Version: v1.20.2 Commit: 8047404ac374186ba58950a71c1d744909e541fa Date: 2022-01-28T20:56:49.577076Z State: finished Success: True [rtd-command-info] start-time: 2022-01-28T20:56:51.723368Z, end-time: 2022-01-28T20:56:54.131484Z, duration: 2, exit-code: 0 git clone --no-single-branch --depth 50 git@github.com:InstituteforDiseaseModeling/emodpy-malaria.git . Cloning into '.'... Warning: Permanently added 'github.com,192.30.255.113' (ECDSA) to the list of known hosts. [rtd-command-info] start-time: 2022-01-28T20:56:54.354149Z, end-time: 2022-01-28T20:56:54.592545Z, duration: 0, exit-code: 0 git checkout --force 8047404ac374186ba58950a71c1d744909e541fa Note: checking out '8047404ac374186ba58950a71c1d744909e541fa'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at 8047404 Added error checking for SD within MD [rtd-command-info] start-time: 2022-01-28T20:56:54.819643Z, end-time: 2022-01-28T20:56:54.889491Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2022-01-28T20:56:56.288573Z, end-time: 2022-01-28T20:57:00.594493Z, duration: 4, exit-code: 0 python3.7 -mvirtualenv Using base prefix '/home/docs/.pyenv/versions/3.7.9' New python executable in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin/python3.7 Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin/python Installing setuptools, pip, wheel... done. [rtd-command-info] start-time: 2022-01-28T20:57:00.770884Z, end-time: 2022-01-28T20:57:02.712421Z, duration: 1, exit-code: 0 python -m pip install --upgrade --no-cache-dir pip setuptools<58.3.0 Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/simple Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages (21.3.1) Collecting setuptools<58.3.0 Downloading setuptools-58.2.0-py3-none-any.whl (946 kB) Installing collected packages: setuptools Attempting uninstall: setuptools Found existing installation: setuptools 60.5.0 Uninstalling setuptools-60.5.0: Successfully uninstalled setuptools-60.5.0 Successfully installed setuptools-58.2.0 [rtd-command-info] start-time: 2022-01-28T20:57:02.874735Z, end-time: 2022-01-28T20:57:11.531752Z, duration: 8, exit-code: 0 python -m pip install --upgrade --no-cache-dir mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<2.2 Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/simple Collecting mock==1.0.1 Downloading mock-1.0.1.zip (861 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting pillow==5.4.1 Downloading Pillow-5.4.1-cp37-cp37m-manylinux1_x86_64.whl (2.0 MB) Collecting alabaster!=0.7.5,<0.8,>=0.7 Downloading alabaster-0.7.12-py2.py3-none-any.whl (14 kB) Collecting commonmark==0.8.1 Downloading commonmark-0.8.1-py2.py3-none-any.whl (47 kB) Collecting recommonmark==0.5.0 Downloading recommonmark-0.5.0-py2.py3-none-any.whl (9.8 kB) Collecting sphinx<2 Downloading Sphinx-1.8.6-py2.py3-none-any.whl (3.1 MB) Collecting sphinx-rtd-theme<0.5 Downloading sphinx_rtd_theme-0.4.3-py2.py3-none-any.whl (6.4 MB) Collecting readthedocs-sphinx-ext<2.2 Downloading readthedocs_sphinx_ext-2.1.4-py2.py3-none-any.whl (29 kB) Collecting future Downloading future-0.18.2.tar.gz (829 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting docutils>=0.11 Downloading docutils-0.18.1-py2.py3-none-any.whl (570 kB) Collecting snowballstemmer>=1.1 Downloading snowballstemmer-2.2.0-py2.py3-none-any.whl (93 kB) Collecting requests>=2.0.0 Downloading requests-2.27.1-py2.py3-none-any.whl (63 kB) Collecting sphinxcontrib-websupport Downloading sphinxcontrib_websupport-1.2.4-py2.py3-none-any.whl (39 kB) Collecting six>=1.5 Downloading six-1.16.0-py2.py3-none-any.whl (11 kB) Collecting Pygments>=2.0 Downloading Pygments-2.11.2-py3-none-any.whl (1.1 MB) Collecting babel!=2.0,>=1.3 Downloading Babel-2.9.1-py2.py3-none-any.whl (8.8 MB) Requirement already satisfied: setuptools in 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Downloading charset_normalizer-2.0.10-py3-none-any.whl (39 kB) Collecting pyparsing!=3.0.5,>=2.0.2 Downloading pyparsing-3.0.7-py3-none-any.whl (98 kB) Collecting sphinxcontrib-serializinghtml Downloading sphinxcontrib_serializinghtml-1.1.5-py2.py3-none-any.whl (94 kB) Building wheels for collected packages: mock, future Building wheel for mock (setup.py): started Building wheel for mock (setup.py): finished with status 'done' Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23773 sha256=7e5e70cd0cfad2682522a509798280d75fe6e5a9d7329767da7b2080efda0212 Stored in directory: /tmp/pip-ephem-wheel-cache-kb2ym5wk/wheels/7a/94/b1/0fdc5339a5bd487a5cc15421ec200d9ba3e2aa7190e4a727f1 Building wheel for future (setup.py): started Building wheel for future (setup.py): finished with status 'done' Created wheel for future: filename=future-0.18.2-py3-none-any.whl size=491070 sha256=91e285ffbf11b9ce1717e93690038e78390263790044320c8dd588a623a3fcd0 Stored in directory: /tmp/pip-ephem-wheel-cache-kb2ym5wk/wheels/56/b0/fe/4410d17b32f1f0c3cf54cdfb2bc04d7b4b8f4ae377e2229ba0 Successfully built mock future Installing collected packages: urllib3, sphinxcontrib-serializinghtml, pytz, pyparsing, MarkupSafe, idna, charset-normalizer, certifi, sphinxcontrib-websupport, snowballstemmer, six, requests, Pygments, packaging, Jinja2, imagesize, future, docutils, babel, alabaster, sphinx, commonmark, sphinx-rtd-theme, recommonmark, readthedocs-sphinx-ext, pillow, mock Successfully installed Jinja2-3.0.3 MarkupSafe-2.0.1 Pygments-2.11.2 alabaster-0.7.12 babel-2.9.1 certifi-2021.10.8 charset-normalizer-2.0.10 commonmark-0.8.1 docutils-0.17.1 future-0.18.2 idna-3.3 imagesize-1.3.0 mock-1.0.1 packaging-21.3 pillow-5.4.1 pyparsing-3.0.7 pytz-2021.3 readthedocs-sphinx-ext-2.1.4 recommonmark-0.5.0 requests-2.27.1 six-1.16.0 snowballstemmer-2.2.0 sphinx-1.8.6 sphinx-rtd-theme-0.4.3 sphinxcontrib-serializinghtml-1.1.5 sphinxcontrib-websupport-1.2.4 urllib3-1.26.8 [rtd-command-info] start-time: 2022-01-28T20:57:11.746848Z, end-time: 2022-01-28T20:57:47.039210Z, duration: 35, exit-code: 0 python -m pip install --exists-action=w --no-cache-dir -r requirements.txt Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/simple Collecting emodpy~=1.16.0 Downloading https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/emodpy/1.16.2/emodpy-1.16.2-py3-none-any.whl (116 kB) Collecting emod-malaria==0.0.10 Downloading https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/emod-malaria/0.0.10/emod_malaria-0.0.10-py3-none-any.whl (4.6 MB) Collecting snakemake~=6.12.3 Downloading snakemake-6.12.3.tar.gz (278 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting idmtools-models~=1.6.0 Downloading 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keyring-23.5.0-py3-none-any.whl (33 kB) Collecting idmtools-platform-comps~=1.6.0 Downloading https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/idmtools-platform-comps/1.6.4/idmtools_platform_comps-1.6.4-py3-none-any.whl (177 kB) Collecting wrapt Downloading wrapt-1.13.3-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (79 kB) Requirement already satisfied: requests in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages (from snakemake~=6.12.3->-r requirements.txt (line 3)) (2.27.1) Collecting ratelimiter Downloading ratelimiter-1.2.0.post0-py3-none-any.whl (6.6 kB) Collecting pyyaml Downloading PyYAML-6.0-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (596 kB) Collecting configargparse Downloading ConfigArgParse-1.5.3-py3-none-any.whl (20 kB) Collecting appdirs Downloading 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pyCOMPS~=2.5.0->idmtools-platform-comps~=1.6.0->emodpy~=1.16.0->-r requirements.txt (line 1)) (0.18.2) Collecting xdg>=4.0.1 Downloading xdg-5.1.1-py3-none-any.whl (5.0 kB) Collecting cffi>=1.4.0 Downloading cffi-1.15.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (427 kB) Collecting cached-property Downloading cached_property-1.5.2-py2.py3-none-any.whl (7.6 kB) Collecting pytest>=3.2.5 Downloading pytest-6.2.5-py3-none-any.whl (280 kB) Collecting cryptography>=2.0 Downloading cryptography-36.0.1-cp36-abi3-manylinux_2_24_x86_64.whl (3.6 MB) Collecting soupsieve>1.2 Downloading soupsieve-2.3.1-py3-none-any.whl (37 kB) Collecting scikit-learn Downloading scikit_learn-1.0.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (24.8 MB) Collecting pycparser Downloading pycparser-2.21-py2.py3-none-any.whl (118 kB) Collecting py>=1.8.2 Downloading py-1.11.0-py2.py3-none-any.whl (98 kB) Collecting toml Downloading toml-0.10.2-py2.py3-none-any.whl (16 kB) Collecting iniconfig Downloading iniconfig-1.1.1-py2.py3-none-any.whl (5.0 kB) Collecting joblib>=0.11 Downloading joblib-1.1.0-py2.py3-none-any.whl (306 kB) Collecting threadpoolctl>=2.0.0 Downloading threadpoolctl-3.0.0-py3-none-any.whl (14 kB) Building wheels for collected packages: snakemake, connection-pool, bs4, stopit, prodict, sklearn, docopt Building wheel for snakemake (setup.py): started Building wheel for snakemake (setup.py): finished with status 'done' Created wheel for snakemake: filename=snakemake-6.12.3-py3-none-any.whl size=299152 sha256=60e7af5799abc1bde9104d6efe37776358b1880509be279534a2c40d3155caad Stored in directory: /tmp/pip-ephem-wheel-cache-ouvpi6l8/wheels/a6/eb/38/098b4274b2c1bb19950c114dd62d2856c19d1a4fc704735774 Building wheel for connection-pool (setup.py): started Building wheel for connection-pool (setup.py): finished with status 'done' Created wheel for connection-pool: filename=connection_pool-0.0.3-py3-none-any.whl size=4084 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Building wheel for prodict (setup.py): finished with status 'done' Created wheel for prodict: filename=prodict-0.8.18-py3-none-any.whl size=4223 sha256=3ae63a366b6e35867698351babf95c5b812f655005285da03fc5681037420624 Stored in directory: /tmp/pip-ephem-wheel-cache-ouvpi6l8/wheels/a8/e6/67/cda708a2cd06853a75a33ecab7ade9eda84e962a7635406c70 Building wheel for sklearn (setup.py): started Building wheel for sklearn (setup.py): finished with status 'done' Created wheel for sklearn: filename=sklearn-0.0-py2.py3-none-any.whl size=1310 sha256=9add46881cf9944a5810b82b321441d63fc3bbefa8efc5b92f2567c334874cb0 Stored in directory: /tmp/pip-ephem-wheel-cache-ouvpi6l8/wheels/46/ef/c3/157e41f5ee1372d1be90b09f74f82b10e391eaacca8f22d33e Building wheel for docopt (setup.py): started Building wheel for docopt (setup.py): finished with status 'done' Created wheel for docopt: filename=docopt-0.6.2-py2.py3-none-any.whl size=13723 sha256=1031eeac8563d0f5479c6827b5ac261144d25cbc331b9367d9a8767a64144872 Stored in directory: /tmp/pip-ephem-wheel-cache-ouvpi6l8/wheels/72/b0/3f/1d95f96ff986c7dfffe46ce2be4062f38ebd04b506c77c81b9 Successfully built snakemake connection-pool bs4 stopit prodict sklearn docopt Installing collected packages: zipp, typing-extensions, pycparser, numpy, importlib-metadata, yarg, toml, threadpoolctl, scipy, python-dateutil, py, pluggy, packaging, joblib, iniconfig, humanfriendly, docopt, cffi, cached-property, attrs, xdg, traitlets, tqdm, tabulate, soupsieve, smmap, scikit-learn, pyyaml, pytest, pyrsistent, pygit2, pipreqs, pandas, more-itertools, jeepney, importlib-resources, diskcache, cryptography, coloredlogs, backoff, sklearn, shapely, SecretStorage, pytest-lazy-fixture, pyproj, pyCOMPS, prodict, pillow, lz4, kiwisolver, jupyter-core, jsonschema, ipython-genutils, idmtools, gitdb, geographiclib, fonttools, cycler, beautifulsoup4, wrapt, toposort, stopit, smart-open, ratelimiter, pulp, psutil, nbformat, matplotlib, keyring, idmtools-platform-comps, idmtools-models, gitpython, filelock, emod-api, datrie, connection-pool, configargparse, click, bs4, astunparse, astor, appdirs, snakemake, emodpy, emod-malaria Attempting uninstall: packaging Found existing installation: packaging 21.3 Uninstalling packaging-21.3: Successfully uninstalled packaging-21.3 Attempting uninstall: pillow Found existing installation: Pillow 5.4.1 Uninstalling Pillow-5.4.1: Successfully uninstalled Pillow-5.4.1 Successfully installed SecretStorage-3.3.1 appdirs-1.4.4 astor-0.8.1 astunparse-1.6.3 attrs-21.4.0 backoff-1.10.0 beautifulsoup4-4.10.0 bs4-0.0.1 cached-property-1.5.2 cffi-1.15.0 click-7.1.2 coloredlogs-15.0.1 configargparse-1.5.3 connection-pool-0.0.3 cryptography-36.0.1 cycler-0.11.0 datrie-0.8.2 diskcache-5.2.1 docopt-0.6.2 emod-api-1.20.2 emod-malaria-0.0.10 emodpy-1.16.2 filelock-3.4.2 fonttools-4.29.0 geographiclib-1.52 gitdb-4.0.9 gitpython-3.1.26 humanfriendly-10.0 idmtools-1.6.4 idmtools-models-1.6.4 idmtools-platform-comps-1.6.4 importlib-metadata-4.10.1 importlib-resources-5.4.0 iniconfig-1.1.1 ipython-genutils-0.2.0 jeepney-0.7.1 joblib-1.1.0 jsonschema-4.4.0 jupyter-core-4.9.1 keyring-23.5.0 kiwisolver-1.3.2 lz4-3.1.10 matplotlib-3.5.1 more-itertools-8.8.0 nbformat-5.1.3 numpy-1.21.5 packaging-20.9 pandas-1.1.5 pillow-9.0.0 pipreqs-0.4.11 pluggy-0.13.1 prodict-0.8.18 psutil-5.9.0 pulp-2.6.0 py-1.11.0 pyCOMPS-2.5.0 pycparser-2.21 pygit2-1.5.0 pyproj-3.2.1 pyrsistent-0.18.1 pytest-6.2.5 pytest-lazy-fixture-0.6.3 python-dateutil-2.8.2 pyyaml-5.4.1 ratelimiter-1.2.0.post0 scikit-learn-1.0.2 scipy-1.7.3 shapely-1.8.0 sklearn-0.0 smart-open-5.2.1 smmap-5.0.0 snakemake-6.12.3 soupsieve-2.3.1 stopit-1.1.2 tabulate-0.8.9 threadpoolctl-3.0.0 toml-0.10.2 toposort-1.7 tqdm-4.62.3 traitlets-5.1.1 typing-extensions-4.0.1 wrapt-1.13.3 xdg-5.1.1 yarg-0.1.9 zipp-3.7.0 [rtd-command-info] start-time: 2022-01-28T20:57:47.214825Z, end-time: 2022-01-28T20:57:52.620208Z, duration: 5, exit-code: 0 python -m pip install --exists-action=w --no-cache-dir -r docs/requirements.txt Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/simple Collecting plantweb~=1.2.1 Downloading plantweb-1.2.1-py3-none-any.whl (20 kB) Collecting pygit2~=1.4.0 Downloading pygit2-1.4.0-cp37-cp37m-manylinux2010_x86_64.whl (3.0 MB) Collecting PyGithub~=1.54 Downloading PyGithub-1.55-py3-none-any.whl (291 kB) Collecting sphinx-copybutton~=0.3.1 Downloading sphinx_copybutton-0.3.3-py3-none-any.whl (12 kB) Collecting sphinx-rtd-theme~=0.5.0 Downloading sphinx_rtd_theme-0.5.2-py2.py3-none-any.whl (9.1 MB) Collecting sphinxcontrib-napoleon~=0.7 Downloading sphinxcontrib_napoleon-0.7-py2.py3-none-any.whl (17 kB) Collecting sphinxcontrib-programoutput~=0.16 Downloading sphinxcontrib_programoutput-0.17-py2.py3-none-any.whl (22 kB) Collecting sphinx~=3.3.1 Downloading Sphinx-3.3.1-py3-none-any.whl (2.9 MB) Collecting sphinxext.remoteliteralinclude Downloading sphinxext_remoteliteralinclude-0.3.0-py3-none-any.whl 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sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (20.9) Collecting sphinxcontrib-htmlhelp Downloading sphinxcontrib_htmlhelp-2.0.0-py2.py3-none-any.whl (100 kB) Requirement already satisfied: snowballstemmer>=1.1 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (2.2.0) Requirement already satisfied: sphinxcontrib-serializinghtml in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (1.1.5) Collecting sphinxcontrib-jsmath Downloading sphinxcontrib_jsmath-1.0.1-py2.py3-none-any.whl (5.1 kB) Requirement already satisfied: imagesize in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (1.3.0) Requirement already satisfied: alabaster<0.8,>=0.7 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (0.7.12) Collecting sphinxcontrib-qthelp Downloading sphinxcontrib_qthelp-1.0.3-py2.py3-none-any.whl (90 kB) Collecting sphinxcontrib-devhelp Downloading sphinxcontrib_devhelp-1.0.2-py2.py3-none-any.whl (84 kB) Requirement already satisfied: pytz>=2015.7 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages (from babel>=1.3->sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (2021.3) Requirement already satisfied: pycparser in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages (from cffi>=1.4.0->pygit2~=1.4.0->-r docs/requirements.txt 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(3.0.7) Installing collected packages: sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, docutils, sphinx, pynacl, pyjwt, pockets, deprecated, sphinxext.remoteliteralinclude, sphinxcontrib-programoutput, sphinxcontrib-napoleon, sphinx-rtd-theme, sphinx-copybutton, PyGithub, pygit2, plantweb Attempting uninstall: docutils Found existing installation: docutils 0.17.1 Uninstalling docutils-0.17.1: Successfully uninstalled docutils-0.17.1 Attempting uninstall: sphinx Found existing installation: Sphinx 1.8.6 Uninstalling Sphinx-1.8.6: Successfully uninstalled Sphinx-1.8.6 Attempting uninstall: sphinx-rtd-theme Found existing installation: sphinx-rtd-theme 0.4.3 Uninstalling sphinx-rtd-theme-0.4.3: Successfully uninstalled sphinx-rtd-theme-0.4.3 Attempting uninstall: pygit2 Found existing installation: pygit2 1.5.0 Uninstalling pygit2-1.5.0: Successfully uninstalled pygit2-1.5.0 Successfully installed PyGithub-1.55 deprecated-1.2.13 docutils-0.16 plantweb-1.2.1 pockets-0.9.1 pygit2-1.4.0 pyjwt-2.3.0 pynacl-1.5.0 sphinx-3.3.1 sphinx-copybutton-0.3.3 sphinx-rtd-theme-0.5.2 sphinxcontrib-applehelp-1.0.2 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-htmlhelp-2.0.0 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-napoleon-0.7 sphinxcontrib-programoutput-0.17 sphinxcontrib-qthelp-1.0.3 sphinxext.remoteliteralinclude-0.3.0 [rtd-command-info] start-time: 2022-01-28T20:57:52.809398Z, end-time: 2022-01-28T20:57:54.206372Z, duration: 1, exit-code: 0 python ./setup.py install --force running install running bdist_egg running egg_info creating emodpy_malaria.egg-info writing emodpy_malaria.egg-info/PKG-INFO writing dependency_links to emodpy_malaria.egg-info/dependency_links.txt writing requirements to emodpy_malaria.egg-info/requires.txt writing top-level names to emodpy_malaria.egg-info/top_level.txt writing manifest file 'emodpy_malaria.egg-info/SOURCES.txt' reading manifest file 'emodpy_malaria.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'emodpy_malaria.egg-info/SOURCES.txt' installing library code to build/bdist.linux-x86_64/egg running install_lib running build_py creating build creating build/lib creating build/lib/emodpy_malaria copying emodpy_malaria/malaria_config.py -> build/lib/emodpy_malaria copying emodpy_malaria/vector_config.py -> build/lib/emodpy_malaria copying emodpy_malaria/__init__.py -> build/lib/emodpy_malaria copying emodpy_malaria/malaria_vector_species_params.py -> build/lib/emodpy_malaria creating build/lib/tests copying tests/add_itn.py -> build/lib/tests copying tests/__init__.py -> build/lib/tests creating build/lib/emodpy_malaria/reporters copying emodpy_malaria/reporters/builtin.py -> build/lib/emodpy_malaria/reporters copying emodpy_malaria/reporters/__init__.py -> build/lib/emodpy_malaria/reporters creating build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/bednet.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/ivermectin.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/sugartrap.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/diag_survey.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/irs.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/spacespraying.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/inputeir.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/mosquitorelease.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/treatment_seeking.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/community_health_worker.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/udbednet.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/drug.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/outbreak.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/__init__.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/vaccine.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/drug_campaign.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/outdoorrestkill.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/common.py -> build/lib/emodpy_malaria/interventions creating build/lib/emodpy_malaria/demographics copying emodpy_malaria/demographics/MalariaDemographics.py -> build/lib/emodpy_malaria/demographics copying emodpy_malaria/demographics/__init__.py -> build/lib/emodpy_malaria/demographics creating build/lib/tests/unittests copying tests/unittests/test_malaria_interventions.py -> build/lib/tests/unittests copying tests/unittests/get_latest_schema.py -> build/lib/tests/unittests copying tests/unittests/test_treatment_seeking.py -> build/lib/tests/unittests copying tests/unittests/test_malaria_reporters.py -> build/lib/tests/unittests copying tests/unittests/test_malaria_interventions_as_files.py -> build/lib/tests/unittests copying tests/unittests/get_unittest_coverage.py -> build/lib/tests/unittests copying tests/unittests/test_malaria_config.py -> build/lib/tests/unittests copying tests/unittests/schema_path_file.py -> build/lib/tests/unittests copying tests/unittests/test_import.py -> build/lib/tests/unittests copying tests/unittests/__init__.py -> build/lib/tests/unittests copying emodpy_malaria/malaria_drug_params.csv -> build/lib/emodpy_malaria creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/egg creating build/bdist.linux-x86_64/egg/emodpy_malaria copying build/lib/emodpy_malaria/malaria_config.py -> build/bdist.linux-x86_64/egg/emodpy_malaria creating build/bdist.linux-x86_64/egg/emodpy_malaria/reporters copying build/lib/emodpy_malaria/reporters/builtin.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/reporters copying build/lib/emodpy_malaria/reporters/__init__.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/reporters copying build/lib/emodpy_malaria/vector_config.py -> build/bdist.linux-x86_64/egg/emodpy_malaria copying build/lib/emodpy_malaria/malaria_drug_params.csv -> build/bdist.linux-x86_64/egg/emodpy_malaria creating build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/bednet.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/ivermectin.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/sugartrap.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/diag_survey.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/irs.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/spacespraying.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/inputeir.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/mosquitorelease.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/treatment_seeking.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/community_health_worker.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/udbednet.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/drug.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/outbreak.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/__init__.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/vaccine.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/drug_campaign.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/outdoorrestkill.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/common.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions creating build/bdist.linux-x86_64/egg/emodpy_malaria/demographics copying build/lib/emodpy_malaria/demographics/MalariaDemographics.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/demographics copying build/lib/emodpy_malaria/demographics/__init__.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/demographics copying build/lib/emodpy_malaria/__init__.py -> build/bdist.linux-x86_64/egg/emodpy_malaria copying build/lib/emodpy_malaria/malaria_vector_species_params.py -> build/bdist.linux-x86_64/egg/emodpy_malaria creating build/bdist.linux-x86_64/egg/tests creating build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_malaria_interventions.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/get_latest_schema.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_treatment_seeking.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_malaria_reporters.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_malaria_interventions_as_files.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/get_unittest_coverage.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_malaria_config.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/schema_path_file.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_import.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/__init__.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/add_itn.py -> build/bdist.linux-x86_64/egg/tests copying build/lib/tests/__init__.py -> build/bdist.linux-x86_64/egg/tests byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/malaria_config.py to malaria_config.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/reporters/builtin.py to builtin.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/reporters/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/vector_config.py to vector_config.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/bednet.py to bednet.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/ivermectin.py to ivermectin.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/sugartrap.py to sugartrap.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/diag_survey.py to diag_survey.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/irs.py to irs.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/spacespraying.py to spacespraying.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/inputeir.py to inputeir.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/mosquitorelease.py to mosquitorelease.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/treatment_seeking.py to treatment_seeking.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/community_health_worker.py to community_health_worker.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/udbednet.py to udbednet.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/drug.py to drug.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/outbreak.py to outbreak.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/vaccine.py to vaccine.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/drug_campaign.py to drug_campaign.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/outdoorrestkill.py to outdoorrestkill.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/common.py to common.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/demographics/MalariaDemographics.py to MalariaDemographics.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/demographics/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/malaria_vector_species_params.py to malaria_vector_species_params.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_malaria_interventions.py to test_malaria_interventions.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/get_latest_schema.py to get_latest_schema.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_treatment_seeking.py to test_treatment_seeking.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_malaria_reporters.py to test_malaria_reporters.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_malaria_interventions_as_files.py to test_malaria_interventions_as_files.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/get_unittest_coverage.py to get_unittest_coverage.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_malaria_config.py to test_malaria_config.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/schema_path_file.py to schema_path_file.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_import.py to test_import.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/add_itn.py to add_itn.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/__init__.py to __init__.cpython-37.pyc creating build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO zip_safe flag not set; analyzing archive contents... emodpy_malaria.__pycache__.malaria_config.cpython-37: module references __file__ tests.unittests.__pycache__.schema_path_file.cpython-37: module references __file__ tests.unittests.__pycache__.test_malaria_config.cpython-37: module references __file__ tests.unittests.__pycache__.test_malaria_interventions.cpython-37: module references __file__ tests.unittests.__pycache__.test_malaria_reporters.cpython-37: module references __file__ tests.unittests.__pycache__.test_treatment_seeking.cpython-37: module references __file__ creating dist creating 'dist/emodpy_malaria-1.0.4-py3.7.egg' and adding 'build/bdist.linux-x86_64/egg' to it removing 'build/bdist.linux-x86_64/egg' (and everything under it) Processing emodpy_malaria-1.0.4-py3.7.egg creating /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages/emodpy_malaria-1.0.4-py3.7.egg Extracting emodpy_malaria-1.0.4-py3.7.egg to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Adding emodpy-malaria 1.0.4 to easy-install.pth file Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages/emodpy_malaria-1.0.4-py3.7.egg Processing dependencies for emodpy-malaria==1.0.4 Searching for snakemake==6.12.3 Best match: snakemake 6.12.3 Adding snakemake 6.12.3 to easy-install.pth file Installing snakemake script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Installing snakemake-bash-completion script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for emod-malaria==0.0.10 Best match: emod-malaria 0.0.10 Adding emod-malaria 0.0.10 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for emodpy==1.16.2 Best match: emodpy 1.16.2 Adding emodpy 1.16.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for jsonschema==4.4.0 Best match: jsonschema 4.4.0 Adding jsonschema 4.4.0 to easy-install.pth file Installing jsonschema script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for GitPython==3.1.26 Best match: GitPython 3.1.26 Adding GitPython 3.1.26 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for toposort==1.7 Best match: toposort 1.7 Adding toposort 1.7 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for PuLP==2.6.0 Best match: PuLP 2.6.0 Adding PuLP 2.6.0 to easy-install.pth file Installing pulptest script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for ConfigArgParse==1.5.3 Best match: ConfigArgParse 1.5.3 Adding ConfigArgParse 1.5.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for psutil==5.9.0 Best match: psutil 5.9.0 Adding psutil 5.9.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for datrie==0.8.2 Best match: datrie 0.8.2 Adding datrie 0.8.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for PyYAML==5.4.1 Best match: PyYAML 5.4.1 Adding PyYAML 5.4.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for wrapt==1.13.3 Best match: wrapt 1.13.3 Adding wrapt 1.13.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for nbformat==5.1.3 Best match: nbformat 5.1.3 Adding nbformat 5.1.3 to easy-install.pth file Installing jupyter-trust script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for ratelimiter==1.2.0.post0 Best match: ratelimiter 1.2.0.post0 Adding ratelimiter 1.2.0.post0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for filelock==3.4.2 Best match: filelock 3.4.2 Adding filelock 3.4.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for appdirs==1.4.4 Best match: appdirs 1.4.4 Adding appdirs 1.4.4 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for smart-open==5.2.1 Best match: smart-open 5.2.1 Adding smart-open 5.2.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for docutils==0.16 Best match: docutils 0.16 Adding docutils 0.16 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for connection-pool==0.0.3 Best match: connection-pool 0.0.3 Adding connection-pool 0.0.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for tabulate==0.8.9 Best match: tabulate 0.8.9 Adding tabulate 0.8.9 to easy-install.pth file Installing tabulate script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for stopit==1.1.2 Best match: stopit 1.1.2 Adding stopit 1.1.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for requests==2.27.1 Best match: requests 2.27.1 Adding requests 2.27.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for matplotlib==3.5.1 Best match: matplotlib 3.5.1 Adding matplotlib 3.5.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for idmtools-models==1.6.4 Best match: idmtools-models 1.6.4 Adding idmtools-models 1.6.4 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for bs4==0.0.1 Best match: bs4 0.0.1 Adding bs4 0.0.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for astunparse==1.6.3 Best match: astunparse 1.6.3 Adding astunparse 1.6.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for emod-api==1.20.2 Best match: emod-api 1.20.2 Adding emod-api 1.20.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for astor==0.8.1 Best match: astor 0.8.1 Adding astor 0.8.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for keyring==23.5.0 Best match: keyring 23.5.0 Adding keyring 23.5.0 to easy-install.pth file Installing keyring script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for idmtools==1.6.4 Best match: idmtools 1.6.4 Adding idmtools 1.6.4 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for click==7.1.2 Best match: click 7.1.2 Adding click 7.1.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for idmtools-platform-comps==1.6.4 Best match: idmtools-platform-comps 1.6.4 Adding idmtools-platform-comps 1.6.4 to easy-install.pth file Installing comps-cli script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for importlib-metadata==4.10.1 Best match: importlib-metadata 4.10.1 Adding importlib-metadata 4.10.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for attrs==21.4.0 Best match: attrs 21.4.0 Adding attrs 21.4.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for importlib-resources==5.4.0 Best match: importlib-resources 5.4.0 Adding importlib-resources 5.4.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for typing-extensions==4.0.1 Best match: typing-extensions 4.0.1 Adding typing-extensions 4.0.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for pyrsistent==0.18.1 Best match: pyrsistent 0.18.1 Adding pyrsistent 0.18.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for gitdb==4.0.9 Best match: gitdb 4.0.9 Adding gitdb 4.0.9 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for ipython-genutils==0.2.0 Best match: ipython-genutils 0.2.0 Adding ipython-genutils 0.2.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for jupyter-core==4.9.1 Best match: jupyter-core 4.9.1 Adding jupyter-core 4.9.1 to easy-install.pth file Installing jupyter script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Installing jupyter-migrate script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Installing jupyter-troubleshoot script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for traitlets==5.1.1 Best match: traitlets 5.1.1 Adding traitlets 5.1.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for urllib3==1.26.8 Best match: urllib3 1.26.8 Adding urllib3 1.26.8 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for idna==3.3 Best match: idna 3.3 Adding idna 3.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for charset-normalizer==2.0.10 Best match: charset-normalizer 2.0.10 Adding charset-normalizer 2.0.10 to easy-install.pth file Installing normalizer script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for certifi==2021.10.8 Best match: certifi 2021.10.8 Adding certifi 2021.10.8 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for kiwisolver==1.3.2 Best match: kiwisolver 1.3.2 Adding kiwisolver 1.3.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for cycler==0.11.0 Best match: cycler 0.11.0 Adding cycler 0.11.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for Pillow==9.0.0 Best match: Pillow 9.0.0 Adding Pillow 9.0.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for pyparsing==3.0.7 Best match: pyparsing 3.0.7 Adding pyparsing 3.0.7 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for numpy==1.21.5 Best match: numpy 1.21.5 Adding numpy 1.21.5 to easy-install.pth file Installing f2py script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Installing f2py3 script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Installing f2py3.7 script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for packaging==20.9 Best match: packaging 20.9 Adding packaging 20.9 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for python-dateutil==2.8.2 Best match: python-dateutil 2.8.2 Adding python-dateutil 2.8.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for fonttools==4.29.0 Best match: fonttools 4.29.0 Adding fonttools 4.29.0 to easy-install.pth file Installing fonttools script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Installing pyftmerge script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Installing pyftsubset script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Installing ttx script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for Jinja2==3.0.3 Best match: Jinja2 3.0.3 Adding Jinja2 3.0.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for beautifulsoup4==4.10.0 Best match: beautifulsoup4 4.10.0 Adding beautifulsoup4 4.10.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for wheel==0.37.1 Best match: wheel 0.37.1 Adding wheel 0.37.1 to easy-install.pth file Installing wheel script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for six==1.16.0 Best match: six 1.16.0 Adding six 1.16.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for Shapely==1.8.0 Best match: Shapely 1.8.0 Adding Shapely 1.8.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for sklearn==0.0 Best match: sklearn 0.0 Adding sklearn 0.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for pyproj==3.2.1 Best match: pyproj 3.2.1 Adding pyproj 3.2.1 to easy-install.pth file Installing pyproj script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for pandas==1.1.5 Best match: pandas 1.1.5 Adding pandas 1.1.5 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for geographiclib==1.52 Best match: geographiclib 1.52 Adding geographiclib 1.52 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for prodict==0.8.18 Best match: prodict 0.8.18 Adding prodict 0.8.18 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for scipy==1.7.3 Best match: scipy 1.7.3 Adding scipy 1.7.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for lz4==3.1.10 Best match: lz4 3.1.10 Adding lz4 3.1.10 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for SecretStorage==3.3.1 Best match: SecretStorage 3.3.1 Adding SecretStorage 3.3.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for jeepney==0.7.1 Best match: jeepney 0.7.1 Adding jeepney 0.7.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for pipreqs==0.4.11 Best match: pipreqs 0.4.11 Adding pipreqs 0.4.11 to easy-install.pth file Installing pipreqs script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for diskcache==5.2.1 Best match: diskcache 5.2.1 Adding diskcache 5.2.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for coloredlogs==15.0.1 Best match: coloredlogs 15.0.1 Adding coloredlogs 15.0.1 to easy-install.pth file Installing coloredlogs script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for pygit2==1.4.0 Best match: pygit2 1.4.0 Adding pygit2 1.4.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for more-itertools==8.8.0 Best match: more-itertools 8.8.0 Adding more-itertools 8.8.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for backoff==1.10.0 Best match: backoff 1.10.0 Adding backoff 1.10.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for pluggy==0.13.1 Best match: pluggy 0.13.1 Adding pluggy 0.13.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for tqdm==4.62.3 Best match: tqdm 4.62.3 Adding tqdm 4.62.3 to easy-install.pth file Installing tqdm script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for pytest-lazy-fixture==0.6.3 Best match: pytest-lazy-fixture 0.6.3 Adding pytest-lazy-fixture 0.6.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for pyCOMPS==2.5.0 Best match: pyCOMPS 2.5.0 Adding pyCOMPS 2.5.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for zipp==3.7.0 Best match: zipp 3.7.0 Adding zipp 3.7.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for smmap==5.0.0 Best match: smmap 5.0.0 Adding smmap 5.0.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for MarkupSafe==2.0.1 Best match: MarkupSafe 2.0.1 Adding MarkupSafe 2.0.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for soupsieve==2.3.1 Best match: soupsieve 2.3.1 Adding soupsieve 2.3.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for scikit-learn==1.0.2 Best match: scikit-learn 1.0.2 Adding scikit-learn 1.0.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for pytz==2021.3 Best match: pytz 2021.3 Adding pytz 2021.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for cryptography==36.0.1 Best match: cryptography 36.0.1 Adding cryptography 36.0.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for docopt==0.6.2 Best match: docopt 0.6.2 Adding docopt 0.6.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for yarg==0.1.9 Best match: yarg 0.1.9 Adding yarg 0.1.9 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for humanfriendly==10.0 Best match: humanfriendly 10.0 Adding humanfriendly 10.0 to easy-install.pth file Installing humanfriendly script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for cached-property==1.5.2 Best match: cached-property 1.5.2 Adding cached-property 1.5.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for cffi==1.15.0 Best match: cffi 1.15.0 Adding cffi 1.15.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for pytest==6.2.5 Best match: pytest 6.2.5 Adding pytest 6.2.5 to easy-install.pth file Installing py.test script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Installing pytest script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for xdg==5.1.1 Best match: xdg 5.1.1 Adding xdg 5.1.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for future==0.18.2 Best match: future 0.18.2 Adding future 0.18.2 to easy-install.pth file Installing futurize script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Installing pasteurize script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for joblib==1.1.0 Best match: joblib 1.1.0 Adding joblib 1.1.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for threadpoolctl==3.0.0 Best match: threadpoolctl 3.0.0 Adding threadpoolctl 3.0.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for pycparser==2.21 Best match: pycparser 2.21 Adding pycparser 2.21 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for py==1.11.0 Best match: py 1.11.0 Adding py 1.11.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for iniconfig==1.1.1 Best match: iniconfig 1.1.1 Adding iniconfig 1.1.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Searching for toml==0.10.2 Best match: toml 0.10.2 Adding toml 0.10.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/v1.20.2/lib/python3.7/site-packages Finished processing dependencies for emodpy-malaria==1.0.4 [rtd-command-info] start-time: 2022-01-28T20:57:56.128223Z, end-time: 2022-01-28T20:57:56.193544Z, duration: 0, exit-code: 0 cat docs/conf.py # -*- coding: utf-8 -*- # # Sphinx Demo docs build configuration file, created by # sphinx-quickstart on Fri Aug 26 16:52:16 2016. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. # # All configuration values have a default; values that are commented out # serve to show the default. # If extensions (or modules to document with autodoc) are in another directory, # add these directories to sys.path here. If the directory is relative to the # docs root, use os.path.abspath to make it absolute, like shown here. # import os import subprocess import sys import sphinx_rtd_theme import configparser from datetime import datetime from urllib.request import urlretrieve if sys.platform in ["linux", "darwin"]: subprocess.check_output(["make", "generate-api"], cwd=os.path.dirname(os.path.abspath(__file__))) else: subprocess.check_output(["make.bat", "generate-api"], cwd=os.path.dirname(os.path.abspath(__file__))) # -- General configuration ------------------------------------------------ tags.add('emodpymalaria') # If your docs needs a minimal Sphinx version, state it here. # # needs_sphinx = '1.0' # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [ 'sphinx.ext.mathjax', 'sphinx.ext.githubpages', 'sphinx.ext.autodoc', 'sphinxcontrib.napoleon', 'sphinx.ext.todo', 'plantweb.directive', 'sphinxcontrib.programoutput', 'sphinx_copybutton', 'sphinx.ext.intersphinx', 'sphinxext.remoteliteralinclude' ] plantuml = 'plantweb' autodoc_default_options = { 'member-order': 'bysource', 'members': None, 'exclude-members': '__all__' } autodoc_mock_imports = [] napoleon_google_docstring = True # napoleon_numpy_docstring = True # Add any paths that contain templates here, relative to this directory. templates_path = ['_templates'] # The suffix(es) of source filenames. # You can specify multiple suffix as a list of string: # # source_suffix = ['.rst', '.md'] source_suffix = '.rst' # The encoding of source files. # # source_encoding = 'utf-8-sig' # The master toctree document. master_doc = 'index' # General information about the project. project = u'emodpy-malaria' copyright = f'1999 - {datetime.today().year}, Bill & Melinda Gates Foundation. All rights reserved.' author = u'Institute for Disease Modeling' # The version info for the project you're documenting, acts as replacement for # |version| and |release|, also used in various other places throughout the # built documents. # # The short X.Y version. #current_path = os.path.dirname(__file__) #version_path = os.path.join(current_path, '..', '.bumpversion.cfg') #config = configparser.ConfigParser() #config.read(version_path) #version = config['bumpversion']['current_version'] # The full version, including alpha/beta/rc tags. # release = u'1.0' # The language for content autogenerated by Sphinx. Refer to docs # for a list of supported languages. # # This is also used if you do content translation via gettext catalogs. # Usually you set "language" from the command line for these cases. language = None # There are two options for replacing |today|: either, you set today to some # non-false value, then it is used: # # today = '' # # Else, today_fmt is used as the format for a strftime call. # # today_fmt = '%B %d, %Y' # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. # This patterns also effect to html_static_path and html_extra_path exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store'] # The reST default role (used for this markup: `text`) to use for all # documents. # # default_role = None # If true, '()' will be appended to :func: etc. cross-reference text. # # add_function_parentheses = True # If true, the current module name will be prepended to all description # unit titles (such as .. function::). # # add_module_names = True # If true, sectionauthor and moduleauthor directives will be shown in the # output. They are ignored by default. # # show_authors = False # The name of the Pygments (syntax highlighting) style to use. pygments_style = 'sphinx' # A list of ignored prefixes for module index sorting. # modindex_common_prefix = [] # If true, keep warnings as "system message" paragraphs in the built documents. # keep_warnings = False # If true, `todo` and `todoList` produce output, else they produce nothing. todo_include_todos = False # RST epilog is added to the end of every topic. Useful for replace # directives to use across the docset. rst_epilog = "\n.. include:: /variables.txt" # -- Options for HTML output ---------------------------------------------- # The theme to use for HTML and HTML Help pages. See the docs for # a list of builtin themes. # html_theme = 'sphinx_rtd_theme' # Theme options are theme-specific and customize the look and feel of a theme # further. For a list of options available for each theme, see the # docs. # # # html_theme_options = { # } # Add any paths that contain custom themes here, relative to this directory. html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] # The name for this set of Sphinx documents. # " v docs" by default. # # html_title = u'Sphinx Demo v1.0' # A shorter title for the navigation bar. Default is the same as html_title. # # html_short_title = None # The name of an image file (relative to this directory) to place at the top # of the sidebar. # html_logo = "images/IDM_white.png" # The name of an image file (relative to this directory) to use as a favicon of # the docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32 # pixels large. # html_favicon = "images/favicon.ico" # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css". html_static_path = ['_static'] html_context = { 'css_files': [ '_static/theme_overrides.css', '_static/copy_button.css' ] } html_js_files = ['show_block_by_os.js'] # Add any extra paths that contain custom files (such as robots.txt or # .htaccess) here, relative to this directory. These files are copied # directly to the root of the docs. # # html_extra_path = [] # If not None, a 'Last updated on:' timestamp is inserted at every page # bottom, using the given strftime format. # The empty string is equivalent to '%b %d, %Y'. # # html_last_updated_fmt = None # If true, SmartyPants will be used to convert quotes and dashes to # typographically correct entities. # # html_use_smartypants = True # Custom sidebar templates, maps document names to template names. # # html_sidebars = {} # Additional templates that should be rendered to pages, maps page names to # template names. # # html_additional_pages = {} # If false, no module index is generated. # # html_domain_indices = True # If false, no index is generated. # # html_use_index = True # If true, the index is split into individual pages for each letter. # # html_split_index = False # If true, links to the reST sources are added to the pages. # html_show_sourcelink = False # If true, "Created using Sphinx" is shown in the HTML footer. Default is True. # html_show_sphinx = False # If true, "(C) Copyright ..." is shown in the HTML footer. Default is True. # # html_show_copyright = True # If true, an OpenSearch description file will be output, and all pages will # contain a tag referring to it. The value of this option must be the # base URL from which the finished HTML is served. # html_use_opensearch = 'www.idmod.org/docs/' # This is the file name suffix for HTML files (e.g. ".xhtml"). # html_file_suffix = None # Language to be used for generating the HTML full-text search index. # Sphinx supports the following languages: # 'da', 'de', 'en', 'es', 'fi', 'fr', 'hu', 'it', 'ja' # 'nl', 'no', 'pt', 'ro', 'ru', 'sv', 'tr', 'zh' # # html_search_language = 'en' # A dictionary with options for the search language support, empty by default. # 'ja' uses this config value. # 'zh' user can custom change `jieba` dictionary path. # # html_search_options = {'type': 'default'} # The name of a javascript file (relative to the configuration directory) that # implements a search results scorer. If empty, the default will be used. # # html_search_scorer = 'scorer.js' # Output file base name for HTML help builder. htmlhelp_basename = 'emodpy-malaria' # -- Options for LaTeX output --------------------------------------------- latex_elements = { # The paper size ('letterpaper' or 'a4paper'). # # 'papersize': 'letterpaper', # The font size ('10pt', '11pt' or '12pt'). # # 'pointsize': '10pt', # Additional stuff for the LaTeX preamble. # # 'preamble': '', # Latex figure (float) alignment # # 'figure_align': 'htbp', } # Grouping the document tree into LaTeX files. List of tuples # (source start file, target name, title, # author, documentclass [howto, manual, or own class]). latex_documents = [ (master_doc, 'emodpy-malaria-docs.tex', u'emodpy-malaria', u'Institute for Disease Modeling', 'manual'), ] # The name of an image file (relative to this directory) to place at the top of # the title page. # # latex_logo = None # For "manual" documents, if this is true, then toplevel headings are parts, # not chapters. # # latex_use_parts = False # If true, show page references after internal links. # # latex_show_pagerefs = False # If true, show URL addresses after external links. # # latex_show_urls = False # Documents to append as an appendix to all manuals. # # latex_appendices = [] # It false, will not define \strong, \code, itleref, \crossref ... but only # \sphinxstrong, ..., \sphinxtitleref, ... To help avoid clash with user added # packages. # # latex_keep_old_macro_names = True # If false, no module index is generated. # # latex_domain_indices = True # -- Options for manual page output --------------------------------------- # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ (master_doc, 'emodpy-malaria-docs', u'emodpy-malaria', [author], 1) ] # If true, show URL addresses after external links. # man_show_urls = True # -- Options for Texinfo output ------------------------------------------- # Grouping the document tree into Texinfo files. List of tuples # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ (master_doc, 'emodpy-malaria-docs', u'emodpy-malaria', author, 'Institute for Disease Modeling', 'How to use emodpy for malaria simulations.', 'Miscellaneous'), ] # Documents to append as an appendix to all manuals. # # texinfo_appendices = [] # If false, no module index is generated. # # texinfo_domain_indices = True # How to display URL addresses: 'footnote', 'no', or 'inline'. # # texinfo_show_urls = 'footnote' # If true, do not generate a @detailmenu in the "Top" node's menu. # # texinfo_no_detailmenu = False # Example configuration for intersphinx: refer to the Python standard library. intersphinx_mapping = {'python': ('https://docs.python.org/3', None), 'emod_api': ('https://docs.idmod.org/projects/emod-api/en/latest/', None), 'emodpy': ('https://docs.idmod.org/projects/emodpy/en/latest/', None), 'idmtools': ('https://docs.idmod.org/projects/idmtools/en/latest/', None), 'emod-malaria': ('https://docs.idmod.org/projects/emod-malaria/en/latest/', None), 'pycomps': ('https://docs.idmod.org/projects/pycomps/en/latest/', None) } ########################################################################### # auto-created readthedocs.org specific configuration # ########################################################################### # # The following code was added during an automated build on readthedocs.org # It is auto created and injected for every build. The result is based on the # conf.py.tmpl file found in the readthedocs.org codebase: # https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl # # Note: this file shouldn't rely on extra dependencies. import importlib import sys import os.path # Borrowed from six. PY3 = sys.version_info[0] == 3 string_types = str if PY3 else basestring from sphinx import version_info # Get suffix for proper linking to GitHub # This is deprecated in Sphinx 1.3+, # as each page can have its own suffix if globals().get('source_suffix', False): if isinstance(source_suffix, string_types): SUFFIX = source_suffix elif isinstance(source_suffix, (list, tuple)): # Sphinx >= 1.3 supports list/tuple to define multiple suffixes SUFFIX = source_suffix[0] elif isinstance(source_suffix, dict): # Sphinx >= 1.8 supports a mapping dictionary for multiple suffixes SUFFIX = list(source_suffix.keys())[0] # make a ``list()`` for py2/py3 compatibility else: # default to .rst SUFFIX = '.rst' else: SUFFIX = '.rst' # Add RTD Static Path. Add to the end because it overwrites previous files. if not 'html_static_path' in globals(): html_static_path = [] if os.path.exists('_static'): html_static_path.append('_static') # Add RTD Theme only if they aren't overriding it already using_rtd_theme = ( ( 'html_theme' in globals() and html_theme in ['default'] and # Allow people to bail with a hack of having an html_style 'html_style' not in globals() ) or 'html_theme' not in globals() ) if using_rtd_theme: theme = importlib.import_module('sphinx_rtd_theme') html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(theme.get_html_theme_path()) else: html_theme_path = [theme.get_html_theme_path()] if globals().get('websupport2_base_url', False): websupport2_base_url = 'https://readthedocs.com/websupport' websupport2_static_url = 'https://assets.readthedocs.com/' #Add project information to the template context. context = { 'using_theme': using_rtd_theme, 'html_theme': html_theme, 'current_version': "v1.20.2", 'version_slug': "v1.20.2", 'MEDIA_URL': "https://media.readthedocs.com/media/", 'STATIC_URL': "https://assets.readthedocs.com/", 'PRODUCTION_DOMAIN': "readthedocs.com", 'versions': [ ("latest", "/en/latest/"), ("stable", "/en/stable/"), ("v1.20.2", "/en/v1.20.2/"), ("v1.0.9", "/en/v1.0.9/"), ("v1.0.2", "/en/v1.0.2/"), ("v0.0.61", "/en/v0.0.61/"), ("v0.0.50", "/en/v0.0.50/"), ("0.0.50", "/en/0.0.50/"), ("v0.0.48", "/en/v0.0.48/"), ("v0.0.45", "/en/v0.0.45/"), ("v0.0.44", "/en/v0.0.44/"), ("v0.0.29", "/en/v0.0.29/"), ("v0.0.18", "/en/v0.0.18/"), ], 'downloads': [ ], 'subprojects': [ ], 'slug': 'institute-for-disease-modeling-emodpy-malaria', 'name': u'emodpy-malaria', 'rtd_language': u'en', 'programming_language': u'words', 'canonical_url': 'https://docs.idmod.org/projects/emodpy-malaria/en/latest/', 'analytics_code': 'UA-87656833-3', 'single_version': False, 'conf_py_path': '/docs/', 'api_host': 'https://readthedocs.com', 'github_user': 'InstituteforDiseaseModeling', 'proxied_api_host': '/_', 'github_repo': 'emodpy-malaria', 'github_version': 'v1.20.2', 'display_github': True, 'bitbucket_user': 'None', 'bitbucket_repo': 'None', 'bitbucket_version': 'v1.20.2', 'display_bitbucket': False, 'gitlab_user': 'None', 'gitlab_repo': 'None', 'gitlab_version': 'v1.20.2', 'display_gitlab': False, 'READTHEDOCS': True, 'using_theme': (html_theme == "default"), 'new_theme': (html_theme == "sphinx_rtd_theme"), 'source_suffix': SUFFIX, 'ad_free': False, 'docsearch_disabled': False, 'user_analytics_code': 'UA-87656833-3', 'global_analytics_code': 'UA-17997319-2', 'commit': '8047404a', } # For sphinx >=1.8 we can use html_baseurl to set the canonical URL. # https://www.sphinx-doc.org/en/master/usage/configuration.html#confval-html_baseurl if version_info >= (1, 8): if not globals().get('html_baseurl'): html_baseurl = context['canonical_url'] context['canonical_url'] = None if 'html_context' in globals(): html_context.update(context) else: html_context = context # Add custom RTD extension if 'extensions' in globals(): # Insert at the beginning because it can interfere # with other extensions. # See https://github.com/rtfd/readthedocs.org/pull/4054 extensions.insert(0, "readthedocs_ext.readthedocs") else: extensions = ["readthedocs_ext.readthedocs"] # Add External version warning banner to the external version documentation if 'tag' == 'external': extensions.insert(1, "readthedocs_ext.external_version_warning") readthedocs_vcs_url = 'None' readthedocs_build_url = 'https://readthedocs.com/projects/institute-for-disease-modeling-emodpy-malaria/builds/837654/' project_language = 'en' # User's Sphinx configurations language_user = globals().get('language', None) latex_engine_user = globals().get('latex_engine', None) latex_elements_user = globals().get('latex_elements', None) # Remove this once xindy gets installed in Docker image and XINDYOPS # env variable is supported # https://github.com/rtfd/readthedocs-docker-images/pull/98 latex_use_xindy = False chinese = any([ language_user in ('zh_CN', 'zh_TW'), project_language in ('zh_CN', 'zh_TW'), ]) japanese = any([ language_user == 'ja', project_language == 'ja', ]) if chinese: latex_engine = latex_engine_user or 'xelatex' latex_elements_rtd = { 'preamble': '\\usepackage[UTF8]{ctex}\n', } latex_elements = latex_elements_user or latex_elements_rtd elif japanese: latex_engine = latex_engine_user or 'platex' # Make sure our build directory is always excluded exclude_patterns = globals().get('exclude_patterns', []) exclude_patterns.extend(['_build']) [rtd-command-info] start-time: 2022-01-28T20:57:56.386295Z, end-time: 2022-01-28T20:58:03.686849Z, duration: 7, exit-code: 0 python -m sphinx -T -W --keep-going -b html -d _build/doctrees -D language=en . _build/html Running Sphinx v3.3.1 rm: cannot remove 'modules.rst': No such file or directory make: [generate-api] Error 1 (ignored) rm: cannot remove 'emodpy_malaria_index.rst': No such file or directory make: [generate-api] Error 1 (ignored) loading translations [en]... done making output directory... done loading intersphinx inventory from https://docs.python.org/3/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/emod-api/en/latest/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/emodpy/en/latest/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/idmtools/en/latest/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/emod-malaria/en/latest/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/pycomps/en/latest/objects.inv... building [mo]: targets for 0 po files that are out of date building [html]: targets for 31 source files that are out of date updating environment: [new config] 31 added, 0 changed, 0 removed reading sources... [ 3%] emodpy_malaria reading sources... [ 6%] emodpy_malaria.demographics reading sources... [ 9%] emodpy_malaria.demographics.MalariaDemographics reading sources... [ 12%] emodpy_malaria.interventions reading sources... [ 16%] emodpy_malaria.interventions.bednet reading sources... [ 19%] emodpy_malaria.interventions.common reading sources... [ 22%] emodpy_malaria.interventions.community_health_worker reading sources... [ 25%] emodpy_malaria.interventions.diag_survey reading sources... [ 29%] emodpy_malaria.interventions.drug reading sources... [ 32%] emodpy_malaria.interventions.drug_campaign reading sources... [ 35%] emodpy_malaria.interventions.inputeir reading sources... [ 38%] emodpy_malaria.interventions.irs reading sources... [ 41%] emodpy_malaria.interventions.ivermectin reading sources... [ 45%] emodpy_malaria.interventions.mosquitorelease reading sources... [ 48%] emodpy_malaria.interventions.outbreak reading sources... [ 51%] emodpy_malaria.interventions.outdoorrestkill reading sources... [ 54%] emodpy_malaria.interventions.spacespraying reading sources... [ 58%] emodpy_malaria.interventions.sugartrap reading sources... [ 61%] emodpy_malaria.interventions.treatment_seeking reading sources... [ 64%] emodpy_malaria.interventions.udbednet reading sources... [ 67%] emodpy_malaria.interventions.vaccine reading sources... [ 70%] emodpy_malaria.malaria_config reading sources... [ 74%] emodpy_malaria.malaria_vector_species_params reading sources... [ 77%] emodpy_malaria.reporters reading sources... [ 80%] emodpy_malaria.reporters.builtin /!\ WARNING: File 'idmtools.ini' Not Found! For details on how to configure idmtools, see https://docs.idmod.org/projects/idmtools/en/v1.6.4/configuration.html for details on how to configure idmtools. reading sources... [ 83%] emodpy_malaria.vector_config reading sources... [ 87%] emodpy_malaria_index reading sources... [ 90%] faq reading sources... [ 93%] index reading sources... [ 96%] installation reading sources... [100%] installation-basic looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 3%] emodpy_malaria writing output... [ 6%] emodpy_malaria.demographics writing output... [ 9%] emodpy_malaria.demographics.MalariaDemographics writing output... [ 12%] emodpy_malaria.interventions writing output... [ 16%] emodpy_malaria.interventions.bednet writing output... [ 19%] emodpy_malaria.interventions.common writing output... [ 22%] emodpy_malaria.interventions.community_health_worker writing output... [ 25%] emodpy_malaria.interventions.diag_survey writing output... [ 29%] emodpy_malaria.interventions.drug writing output... [ 32%] emodpy_malaria.interventions.drug_campaign writing output... [ 35%] emodpy_malaria.interventions.inputeir writing output... [ 38%] emodpy_malaria.interventions.irs writing output... [ 41%] emodpy_malaria.interventions.ivermectin writing output... [ 45%] emodpy_malaria.interventions.mosquitorelease writing output... [ 48%] emodpy_malaria.interventions.outbreak writing output... [ 51%] emodpy_malaria.interventions.outdoorrestkill writing output... [ 54%] emodpy_malaria.interventions.spacespraying writing output... [ 58%] emodpy_malaria.interventions.sugartrap writing output... [ 61%] emodpy_malaria.interventions.treatment_seeking writing output... [ 64%] emodpy_malaria.interventions.udbednet writing output... [ 67%] emodpy_malaria.interventions.vaccine writing output... [ 70%] emodpy_malaria.malaria_config writing output... [ 74%] emodpy_malaria.malaria_vector_species_params writing output... [ 77%] emodpy_malaria.reporters writing output... [ 80%] emodpy_malaria.reporters.builtin writing output... [ 83%] emodpy_malaria.vector_config writing output... [ 87%] emodpy_malaria_index writing output... [ 90%] faq writing output... [ 93%] index writing output... [ 96%] installation writing output... [100%] installation-basic generating indices... genindex py-modindex done writing additional pages... search opensearch done copying static files... done copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done build succeeded. The HTML pages are in _build/html. Updating searchtools for Read the Docs search... [rtd-command-info] start-time: 2022-01-28T20:58:03.886895Z, end-time: 2022-01-28T20:58:06.472127Z, duration: 2, exit-code: 0 python -m sphinx -T -W --keep-going -b readthedocssinglehtmllocalmedia -d _build/doctrees -D language=en . _build/localmedia Running Sphinx v3.3.1 rm: cannot remove 'modules.rst': No such file or directory make: [generate-api] Error 1 (ignored) loading translations [en]... done making output directory... done loading pickled environment... done building [mo]: targets for 0 po files that are out of date building [readthedocssinglehtmllocalmedia]: all documents updating environment: 0 added, 1 changed, 0 removed reading sources... [100%] emodpy_malaria_index looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done assembling single document... installation installation-basic faq emodpy_malaria_index emodpy_malaria emodpy_malaria.demographics emodpy_malaria.demographics.MalariaDemographics emodpy_malaria.interventions emodpy_malaria.interventions.bednet emodpy_malaria.interventions.common emodpy_malaria.interventions.community_health_worker emodpy_malaria.interventions.diag_survey emodpy_malaria.interventions.drug emodpy_malaria.interventions.drug_campaign emodpy_malaria.interventions.inputeir emodpy_malaria.interventions.irs emodpy_malaria.interventions.ivermectin emodpy_malaria.interventions.mosquitorelease emodpy_malaria.interventions.outbreak emodpy_malaria.interventions.outdoorrestkill emodpy_malaria.interventions.spacespraying emodpy_malaria.interventions.sugartrap emodpy_malaria.interventions.treatment_seeking emodpy_malaria.interventions.udbednet emodpy_malaria.interventions.vaccine emodpy_malaria.reporters emodpy_malaria.reporters.builtin emodpy_malaria.malaria_config emodpy_malaria.malaria_vector_species_params emodpy_malaria.vector_config done writing... done writing additional files... opensearchdone copying static files... done copying extra files... done dumping object inventory... done build succeeded. The HTML page is in _build/localmedia. Updating searchtools for Read the Docs search... [rtd-command-info] start-time: 2022-01-28T20:58:06.677982Z, end-time: 2022-01-28T20:58:09.127333Z, duration: 2, exit-code: 0 python -m sphinx -b latex -D language=en -d _build/doctrees . _build/latex Running Sphinx v3.3.1 rm: cannot remove 'modules.rst': No such file or directory make: [generate-api] Error 1 (ignored) loading translations [en]... done making output directory... done loading pickled environment... done building [mo]: targets for 0 po files that are out of date building [latex]: all documents updating environment: 0 added, 1 changed, 0 removed reading sources... [100%] emodpy_malaria_index looking for now-outdated files... none found pickling environment... done checking consistency... done processing emodpy-malaria-docs.tex... index installation installation-basic faq emodpy_malaria_index emodpy_malaria emodpy_malaria.demographics emodpy_malaria.demographics.MalariaDemographics emodpy_malaria.interventions emodpy_malaria.interventions.bednet emodpy_malaria.interventions.common emodpy_malaria.interventions.community_health_worker emodpy_malaria.interventions.diag_survey emodpy_malaria.interventions.drug emodpy_malaria.interventions.drug_campaign emodpy_malaria.interventions.inputeir emodpy_malaria.interventions.irs emodpy_malaria.interventions.ivermectin emodpy_malaria.interventions.mosquitorelease emodpy_malaria.interventions.outbreak emodpy_malaria.interventions.outdoorrestkill emodpy_malaria.interventions.spacespraying emodpy_malaria.interventions.sugartrap emodpy_malaria.interventions.treatment_seeking emodpy_malaria.interventions.udbednet emodpy_malaria.interventions.vaccine emodpy_malaria.reporters emodpy_malaria.reporters.builtin emodpy_malaria.malaria_config emodpy_malaria.malaria_vector_species_params emodpy_malaria.vector_config resolving references... done writing... done copying TeX support files... copying TeX support files... done build succeeded. The LaTeX files are in _build/latex. Run 'make' in that directory to run these through (pdf)latex (use `make latexpdf' here to do that automatically). WARNING: Missing searchtools: /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/checkouts/v1.20.2/docs/_build/latex/_static/searchtools.js [rtd-command-info] start-time: 2022-01-28T20:58:09.430971Z, end-time: 2022-01-28T20:58:09.508969Z, duration: 0, exit-code: 0 cat latexmkrc $latex = 'latex ' . $ENV{'LATEXOPTS'} . ' %O %S'; $pdflatex = 'pdflatex ' . $ENV{'LATEXOPTS'} . ' %O %S'; $lualatex = 'lualatex ' . $ENV{'LATEXOPTS'} . ' %O %S'; $xelatex = 'xelatex --no-pdf ' . $ENV{'LATEXOPTS'} . ' %O %S'; $makeindex = 'makeindex -s python.ist %O -o %D %S'; add_cus_dep( "glo", "gls", 0, "makeglo" ); sub makeglo { return system( "makeindex -s gglo.ist -o '$_[0].gls' '$_[0].glo'" ); } [rtd-command-info] start-time: 2022-01-28T20:58:09.678385Z, end-time: 2022-01-28T20:58:13.316087Z, duration: 3, exit-code: 0 latexmk -r latexmkrc -pdf -f -dvi- -ps- -jobname=institute-for-disease-modeling-emodpy-malaria -interaction=nonstopmode Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 1, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 2, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 3, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 4, chunk 1. Subroutine makeglo redefined at (eval 11) line 7, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 1, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 2, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 3, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 4, chunk 1. Latexmk: This is Latexmk, John Collins, 1 January 2015, version: 4.41. File::Glob::glob() will disappear in perl 5.30. Use File::Glob::bsd_glob() instead. at /usr/bin/latexmk line 7482. Rule 'pdflatex': Rules & subrules not known to be previously run: pdflatex Rule 'pdflatex': The following rules & subrules became out-of-date: 'pdflatex' ------------ Run number 1 of rule 'pdflatex' ------------ ------------ Running 'pdflatex -interaction=nonstopmode -recorder --jobname="institute-for-disease-modeling-emodpy-malaria" "emodpy-malaria-docs.tex"' ------------ Latexmk: applying rule 'pdflatex'... This is pdfTeX, Version 3.14159265-2.6-1.40.18 (TeX Live 2017/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./emodpy-malaria-docs.tex LaTeX2e <2017-04-15> Babel <3.18> and hyphenation patterns for 84 language(s) loaded. 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LaTeX Warning: Hyper reference `installation-basic::doc' on page 3 undefined on input line 114. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) [3] [4] Chapter 2. LaTeX Warning: Hyper reference `faq:what-are-some-of-the-key-differences-for-pe ople-used-to-using-dtk-tools' on page 5 undefined on input line 235. LaTeX Warning: Hyper reference `faq:do-i-need-to-install-a-whole-bunch-of-pytho n-modules-where-do-i-get-that-list' on page 5 undefined on input line 238. LaTeX Warning: Hyper reference `faq:is-there-an-easier-way-than-typing-index-ur l-with-that-long-url-every-time-i-use-pip' on page 5 undefined on input line 24 1. LaTeX Warning: Hyper reference `faq:how-do-i-find-the-path-or-file-to-my-pip-in i' on page 5 undefined on input line 244. LaTeX Warning: Hyper reference `faq:what-if-the-pip-ini-file-or-pip-folder-does n-t-exist' on page 5 undefined on input line 247. 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\hbox (31.21352pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 get: [][]ob-ject[][] Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 5203) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag-nos- Overfull \hbox (63.55446pt too wide) in paragraph at lines 1444--1444 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 tic_threshold: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 float[][] = 40\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 mea-sure- Overfull \hbox (1.01384pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 event_name: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Di-ag- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 nos-tic Sur-vey\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (27.58405pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 tive_diagnosis_configs: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 neg-a- Overfull \hbox (27.58405pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 tive_diagnosis_configs: Overfull \hbox (6.95406pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ceived_test_event: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ceived_Test\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 IP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 NP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ing_properties: Overfull \hbox (9.814pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ing_duration: Overfull \hbox (29.97432pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (47.68343pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 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[25] Underfull \hbox (badness 10000) in paragraph at lines 1477--1480 []\T1/pcr/b/n/10 diagnostic_type \T1/ptm/m/n/10 ^^U Type of malaria di-ag-nos-t ic used. De-fault is Underfull \hbox (badness 10000) in paragraph at lines 1519--1522 []\T1/ptm/m/n/10 In ga-me-to-cytes/microliter, use mea-sure- LaTeX Warning: Hyper reference `emodpy_malaria.interventions.common:emodpy_mala ria.interventions.common.MalariaDiagnostic' on page 26 undefined on input line 1543. Underfull \hbox (badness 10000) in paragraph at lines 1542--1544 []\T1/pcr/b/n/10 measurement_sensitivity \T1/ptm/m/n/10 ^^U Set-ting for \T1/pt m/b/n/10 Mea-sure-ment_Sensitivity \T1/ptm/m/n/10 in [26] Underfull \hbox (badness 10000) in paragraph at lines 1565--1570 []\T1/pcr/b/n/10 IP_restrictions \T1/ptm/m/n/10 ^^U List of In-di-vid-u-al-Prop -erty key:value pairs that Underfull \hbox (badness 10000) in paragraph at lines 1565--1570 \T1/ptm/m/n/10 in-di-vid-u-als must have to re-ceive the di-ag-nos-tic in-ter-v en-tion. For Underfull \hbox (badness 10000) in paragraph at lines 1565--1570 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue 1"}, Underfull \hbox (badness 10000) in paragraph at lines 1572--1577 []\T1/pcr/b/n/10 NP_restrictions \T1/ptm/m/n/10 ^^U List of Node-Prop-erty key: value pairs Underfull \hbox (badness 10000) in paragraph at lines 1572--1577 \T1/ptm/m/n/10 that nodes must have to re-ceive the di-ag-nos-tic in-ter-ven-ti on. Underfull \hbox (badness 10000) in paragraph at lines 1572--1577 \T1/ptm/m/n/10 For ex-am-ple, \T1/pcr/m/n/10 [{"NodeProperty1":"PropertyValue1" }, Underfull \hbox (badness 10000) in paragraph at lines 1579--1583 []\T1/pcr/b/n/10 disqualifying_properties \T1/ptm/m/n/10 ^^U List of In-di-vid- u-al-Prop-erty Underfull \hbox (badness 10000) in paragraph at lines 1579--1583 \T1/ptm/m/n/10 key:value pairs that cause an in-ter-ven-tion to be aborted. For ex- Underfull \hbox (badness 10000) in paragraph at lines 1579--1583 \T1/ptm/m/n/10 am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue1"} , Underfull \hbox (badness 10000) in paragraph at lines 1602--1605 []\T1/pcr/b/n/10 expire_recent_drugs \T1/ptm/m/n/10 ^^U Adds \T1/pcr/m/n/10 [{" DrugStatus:None"}] \T1/ptm/m/n/10 to \T1/ptm/b/n/10 Prop- [27] Underfull \hbox (badness 10000) in paragraph at lines 1691--1691 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1691--1691 \T1/ptm/m/it/10 drug_code: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cam- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 paign_type: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 MDA\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6775) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: Overfull \hbox (19.21352pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 7344) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag- Overfull \hbox (51.55446pt too wide) in paragraph at lines 1722--1722 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 = 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 fmda_radius: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (6.22408pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 5667) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 balls: [][]int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 treat-ment_delay: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Overfull \hbox (17.97432pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 tar-get_group: Overfull \hbox (33.88365pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (33.19351pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (26.53346pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ing_properties: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ent_drug_configs: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 get_residents_only: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (35.68343pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 False\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Overfull \hbox (144.47322pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ing_drugs_event_name=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Received _Campaign_Drugs\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) [28] [29] [30] Underfull \hbox (badness 10000) in paragraph at lines 1873--1876 []\T1/pcr/b/n/10 ind_property_restrictions \T1/ptm/m/n/10 ^^U The set-ting for \T1/ptm/b/n/10 Prop- Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (57.71327pt too wide) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e-ti-tions: [][]int[ ][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 6348) in paragraph at lines 1918--1918 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][] list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (86.50304pt too wide) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 6032) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 ing_properties: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 trig-ger_condition_list: [][]list[][] = LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 31 undefined on input line 1920. [31] Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 7504) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 treat-ment_delay: [][]int[ ][] Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure-ment_sensitivity: Underfull \hbox (badness 6063) in paragraph at lines 1933--1933 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [ ][]list[][] Overfull \hbox (92.50304pt too wide) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 check_eligibility_at_trigger: LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 32 undefined on input line 1935. Underfull \hbox (badness 10000) in paragraph at lines 1934--1937 \T1/ptm/m/n/10 Add an MSAT (mass screen-ing and treat-ment) drug in-ter-ven-tio n to your cam-paign. See [32] Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 7221) in paragraph at lines 1948--1948 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [ ][]float[][] Underfull \hbox (badness 7595) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (92.50304pt too wide) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 33 undefined on input line 1950. Underfull \hbox (badness 7869) in paragraph at lines 1949--1952 \T1/ptm/m/n/10 Add an fMDA (fo-cal mass drug ad-min-is-tra-tion) drug in-ter-ve n-tion to your cam-paign. See Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 6141) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (75.71327pt too wide) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Overfull \hbox (9.55446pt too wide) in paragraph at lines 1963--1963 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (104.50304pt too wide) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 33 undefined on input line 1965. [33] Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (69.71327pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 7613) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_covera ge: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS-TANCE_ONLY\ TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 node_ids: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (98.50304pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 34 undefined on input line 1980. Underfull \hbox (badness 10000) in paragraph at lines 1993--1993 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ev ent_trigger: [34] Underfull \hbox (badness 5756) in paragraph at lines 2025--2025 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 daily_eir: [][]list[][] Underfull \hbox (badness 5091) in paragraph at lines 2059--2059 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][]l ist[][] = None\T1/ptm/m/n/10 , [35] Underfull \hbox (badness 10000) in paragraph at lines 2099--2099 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2099--2099 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , [36] Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Overfull \hbox (11.51352pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (38.20403pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 killing_box_duration_days: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (98.1333pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 killing_exponential_decay_constant_days: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 int[][] = 90\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (13.73363pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 pelling_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (40.42413pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 pelling_box_duration_days: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (100.35341pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 pelling_exponential_decay_constant_days: [37] Underfull \hbox (badness 10000) in paragraph at lines 2232--2232 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n /10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 []\T1/ptm/m/it/10 schema_path_container\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 re-leased_number: Underfull \hbox (badness 5954) in paragraph at lines 2284--2284 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 leased_fraction: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 leased_infectious: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 leased_species: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 re-leased_genome: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , [38] Underfull \hbox (badness 10000) in paragraph at lines 2304--2306 []\T1/pcr/b/n/10 released_infectious \T1/ptm/m/n/10 ^^U The frac-tion of vec-to rs re-leased that Underfull \hbox (badness 10000) in paragraph at lines 2304--2306 \T1/ptm/m/n/10 are to be in-fec-tious. One can only use this fea-ture when Overfull \hbox (16.27205pt too wide) in paragraph at lines 2304--2306 \T1/ptm/m/n/10 `Malaria_Model'!='MALARIA_MECHANISTIC_MODEL_WITH_PARASITE_GENETI CS' Underfull \hbox (badness 10000) in paragraph at lines 2330--2330 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (16.35448pt too wide) in paragraph at lines 2330--2330 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2330--2330 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 2330--2330 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2330--2330 \T1/ptm/m/it/10 file- Overfull \hbox (2.35487pt too wide) in paragraph at lines 2330--2330 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [39] Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Overfull \hbox (2.73457pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (14.36418pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (52.97314pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (32.53346pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (39.19351pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 5359) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ig- Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 bool[][] = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (16.02399pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5893) in paragraph at lines 2380--2382 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [40] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2435--2435 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 de-mo- Overfull \hbox (38.73457pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 float[][] = Overfull \hbox (50.36418pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (2.6847pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 tions: Overfull \hbox (88.97314pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , Overfull \hbox (68.53346pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (75.19351pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 tar- Overfull \hbox (17.93463pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Overfull \hbox (19.59468pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (11.3646pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 str[][] = Overfull \hbox (26.75435pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (52.02399pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5077) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = - Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cre- Overfull \hbox (90.54375pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 ate_nucleotide_sequence_from: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BAR- Overfull \hbox (33.99452pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 CODE_STRING\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 bar- Overfull \hbox (13.79442pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 code_string: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (52.88371pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 drug_resistant_string: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (43.23422pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 msp_variant_value: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (64.34395pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 pfemp1_variants_values: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 bar- Overfull \hbox (155.51305pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 code_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (194.60234pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 drug_resistant_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = [41] Overfull \vbox (135.66997pt too high) has occurred while \output is active [42] Underfull \hbox (badness 5893) in paragraph at lines 2462--2464 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [43] Overfull \hbox (11.18481pt too wide) in paragraph at lines 2551--2551 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 de-mo- Overfull \hbox (44.73457pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 float[][] Underfull \hbox (badness 8151) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tar- Overfull \hbox (56.36418pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tions: Overfull \hbox (94.97314pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.19351pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tar- Overfull \hbox (23.93463pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (25.59468pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tar- Overfull \hbox (17.3646pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 ig- Overfull \hbox (32.75435pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (58.02399pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Overfull \hbox (10.34447pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 irbc_type: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 mi- Overfull \hbox (42.5643pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 nor_epitope_type: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (10.3446pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 msp_type: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = [44] Overfull \vbox (3.66997pt too high) has occurred while \output is active [45] Underfull \hbox (badness 5893) in paragraph at lines 2578--2580 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e- Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (22.97314pt too wide) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (2.53346pt too wide) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (9.19351pt too wide) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 get_age_min: [][]int[][] = [46] Underfull \hbox (badness 5893) in paragraph at lines 2662--2664 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [47] Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 \T1/ptm/m/it/10 cide_name: Overfull \hbox (29.51352pt too wide) in paragraph at lines 2703--2703 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (32.87419pt too wide) in paragraph at lines 2703--2703 \T1/ptm/m/it/10 killing_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (74.87367pt too wide) in paragraph at lines 2703--2703 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2745--2745 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spray_coverage: [48] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2770--2770 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2770--2770 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2770--2770 \T1/ptm/m/it/10 file- Underfull \hbox (badness 10000) in paragraph at lines 2770--2770 \T1/ptm/m/it/10 name: Underfull \hbox (badness 10000) in paragraph at lines 2770--2770 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 6893) in paragraph at lines 2787--2787 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[] [] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2831--2831 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , [49] Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 tar-gets: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 drug: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.88365pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 6204) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du- Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 ra-tion: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 broad- Overfull \hbox (41.29442pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 cast_event_name: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Overfull \hbox (48.38399pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 ceived_Treatment\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 2867--2871 []\T1/pcr/b/n/10 of individuals to target with the intervention. Default is Underfull \hbox (badness 10000) in paragraph at lines 2867--2871 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 properties\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 [ { "trigger":"NewClinicalCase","coverage":0. Underfull \hbox (badness 10000) in paragraph at lines 2867--2871 \T1/pcr/m/n/10 8,"agemin":15,"agemax":70, "seek":0.4,"rate":0.3}, Underfull \hbox (badness 10000) in paragraph at lines 2867--2871 \T1/pcr/m/n/10 {"trigger":"NewSevereCase","coverage":0.8,"seek":0.6, Underfull \hbox (badness 10000) in paragraph at lines 2885--2886 []\T1/pcr/b/n/10 must have to receive the intervention. For example, Underfull \hbox (badness 10000) in paragraph at lines 2885--2886 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 individuals\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 ["IndividualProperty1:PropertyValue1", [50] Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis- Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 \T1/ptm/m/it/10 0.0013698630136986301\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_e ff: Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 \T1/ptm/m/it/10 0.0006849315068493151\T1/ptm/m/n/10 , \T1/ptm/m/it/10 iv_name: Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Us-ageDe-pen-de ntBed-net\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 \T1/ptm/m/it/10 sonal_dependence: [][]dict[][] = None\T1/ptm/m/n/10 , [51] [52] Underfull \hbox (badness 10000) in paragraph at lines 3114--3114 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3114--3114 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [53] Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep- Underfull \hbox (badness 7273) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 e-ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (34.97314pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (14.53346pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (21.19351pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 7667) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 broad- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 cast_event: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac-cine_type: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ac-qui-si-tion- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 Block-ing\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac - Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 vac-cine_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 cine_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac- Overfull \hbox (29.97394pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 cine_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ef-fi- Overfull \hbox (2.56361pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 cacy_is_multiplicative: [54] Underfull \hbox (badness 5893) in paragraph at lines 3151--3153 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 3213--3213 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3213--3213 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [55] Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 clude_vector_state: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 ify_by: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 GENOME\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 com- Overfull \hbox (9.02399pt too wide) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 bine_similar_genomes: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spe- Overfull \hbox (102.76315pt too wide) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 cific_genome_combinations_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Overfull \hbox (64.54318pt too wide) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 lele_combinations_for_stratification: Overfull \hbox (2.32376pt too wide) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 les_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [56] Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 6893) in paragraph at lines 3347--3347 \T1/ptm/m/it/10 = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 \T1/ptm/m/it/10 ual_property_filter: Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 in-fec- Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 \T1/ptm/m/it/10 tious-ness_bins: Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (4.30418pt too wide) in paragraph at lines 3347--3347 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 7291) in paragraph at lines 3347--3347 [][]\T1/ptm/m/it/10 int[][] = 100\T1/ptm/m/n/10 , \T1/ptm/m/it/10 par-a- Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [57] Underfull \hbox (badness 10000) in paragraph at lines 3408--3408 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i- Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 nodes: Overfull \hbox (3.20416pt too wide) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 pretty_format: Overfull \hbox (15.2441pt too wide) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 port_description: [58] Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re-port-Malar- Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 i-aFil-tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 min_age_years: Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 max_age_years: Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 [][]\T1/ptm/m/it/10 float[][] = 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 has_interventions: Overfull \hbox (74.41385pt too wide) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 clude_30day_avg_infection_duration: [59] Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 start_day: Overfull \hbox (6.45485pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 re-port- Overfull \hbox (21.46431pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 re- Overfull \hbox (28.1245pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 port_filename: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Spa- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 tial-Re- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 port- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 Malar- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 i-aFil- Overfull \hbox (13.23434pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 spa- Overfull \hbox (56.87419pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 tial_output_channels: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 ^^PBlood_Smear_Gametocyte_Prevalence^^Q, ^^PBlood_Smear_Parasite _Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 ^^PCam-paign_Cost^^Q, ^^PDaily_Bites_Per_Human^^Q, ^^PDaily_EIR^ ^Q, ^^PDis-ease_Deaths^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 ^^PNew_Reported_Infections^^Q, ^^PNew_Severe_Cases^^Q, ^^PPCR_Ga metocyte_Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 ^^PPCR_Parasite_Prevalence^^Q, ^^PPfHRP2_Prevalence^^Q, ^^PPop-u -la-tion^^Q, ^^PPreva- Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 lence^^Q, ^^PRain-fall^^Q, ^^PRel-a-tive_Humidity^^Q, ^^PTrue_Pr evalence^^Q De-faults: [60] Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 6893) in paragraph at lines 3563--3563 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3584--3584 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 3584--3584 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- Underfull \hbox (badness 10000) in paragraph at lines 3584--3584 \T1/ptm/m/it/10 clude_infection_table: Underfull \hbox (badness 10000) in paragraph at lines 3584--3584 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- [61] Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 re-port-ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Overfull \hbox (10.30418pt too wide) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 port-ing_interval: Overfull \hbox (10.30418pt too wide) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (20.78384pt too wide) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 port_description: [62] [63] Underfull \hbox (badness 10000) in paragraph at lines 3801--3801 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3801--3801 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (26.78384pt too wide) in paragraph at lines 3801--3801 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 6526) in paragraph at lines 3801--3801 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3801--3801 \T1/ptm/m/it/10 ify_by_gender: Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (14.48471pt too wide) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 in-di- Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 vid- Overfull \hbox (74.78384pt too wide) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 [][]\T1/ptm/m/it/10 str[][] Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 strat- Overfull \hbox (35.68442pt too wide) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 ify_by_gender: [64] Overfull \hbox (47.85474pt too wide) in paragraph at lines 3869--3869 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (49.79494pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 man- Overfull \hbox (35.35486pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 i- Overfull \hbox (45.63463pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (46.26491pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 bar- Overfull \hbox (55.34474pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 codes: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (122.7736pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 drug_resistant_strings: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (148.3231pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 drug_resistant_statistic_type: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (240.52356pt too wide) in paragraph at lines 3869--3869 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 NUM_PEOPLE_WITH_RESISTANT_INFECTION\TS1/ptm/m /it/10 '\T1/ptm/m/n/10 , Overfull \hbox (68.48471pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 age_bins: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (40.35486pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 in- Overfull \hbox (40.35486pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 di- Overfull \hbox (44.7948pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 vid- Overfull \hbox (128.78384pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 ual_property_to_collect: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (36.0248pt too wide) in paragraph at lines 3869--3869 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Overfull \hbox (50.76463pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 strat- Overfull \hbox (89.68442pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 ify_by_gender: Overfull \hbox (39.8048pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (40.24501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 1\T1/pcr/m/n/10 ) [65] Underfull \hbox (badness 10000) in paragraph at lines 3920--3920 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Overfull \hbox (17.85474pt too wide) in paragraph at lines 3949--3949 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (19.79494pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 man- Overfull \hbox (5.35486pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 i- Overfull \hbox (15.63463pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (48.68404pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 species_list: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (22.85487pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (20.76463pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 strat- Overfull \hbox (60.89413pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 ify_by_species: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 in- Overfull \hbox (70.75449pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 clude_wolbachia: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 in- Overfull \hbox (65.80426pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 clude_gestation: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (16.26491pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 bar- Overfull \hbox (25.34474pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 codes: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (26.35487pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [66] Underfull \hbox (badness 10000) in paragraph at lines 3989--3989 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 event_list\T1/ptm/m/n/10 , Overfull \hbox (6.34352pt too wide) in paragraph at lines 3989--3989 \T1/ptm/m/it/10 only_include_events_in_list=True\T1/ptm/m/n/10 , [67] Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 36500000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 re- Overfull \hbox (15.2441pt too wide) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4052--4052 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4052--4052 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 4052--4052 \T1/ptm/m/it/10 En-abled: bool = [68] Underfull \hbox (badness 10000) in paragraph at lines 4100--4100 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4100--4100 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 4100--4100 \T1/ptm/m/it/10 En-abled: bool = Underfull \hbox (badness 10000) in paragraph at lines 4124--4124 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4124--4124 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4124--4124 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 4124--4124 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (55.2345pt too wide) in paragraph at lines 4149--4149 []\T1/ptm/m/it/10 class_name: Overfull \hbox (15.80469pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 str Overfull \hbox (11.99501pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 = Overfull \hbox (28.85487pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (18.57497pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 pa- Overfull \hbox (24.53493pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 ram- Overfull \hbox (13.01491pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 e- Overfull \hbox (23.4746pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 ters: Overfull \hbox (20.24474pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 dict Overfull \hbox (11.99501pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 = Overfull \hbox (27.5448pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (19.68495pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 En- Overfull \hbox (30.7948pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 abled: Overfull \hbox (23.0249pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 = Overfull \hbox (26.08485pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (66.5943pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (23.0249pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 = Overfull \hbox (29.58485pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) [69] Underfull \hbox (badness 5832) in paragraph at lines 4152--4157 \T1/ptm/m/n/10 The re-port can only be used when the sim-u-la-tion setup pa-ram -e-ter \T1/ptm/b/n/10 Malaria_Model \T1/ptm/m/n/10 is set to Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 4198--4198 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 bool = [70] Underfull \hbox (badness 10000) in paragraph at lines 4223--4223 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 4223--4223 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 6236) in paragraph at lines 4271--4271 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 4271--4271 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4271--4271 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , [71] Underfull \hbox (badness 10000) in paragraph at lines 4295--4295 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4295--4295 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4295--4295 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4295--4295 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4295--4295 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4324--4324 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4324--4324 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4324--4324 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4324--4324 \T1/ptm/m/it/10 En-abled: Overfull \hbox (6.5943pt too wide) in paragraph at lines 4324--4324 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 4368--4368 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 bool = [72] Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 str = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 bool = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (19.2345pt too wide) in paragraph at lines 4415--4415 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 e-ters: Underfull \hbox (badness 8151) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 dict = Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 abled: Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (30.5943pt too wide) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 Pretty_Format: [73] Overfull \hbox (67.2345pt too wide) in paragraph at lines 4443--4443 []\T1/ptm/m/it/10 class_name: Overfull \hbox (27.80469pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 str Overfull \hbox (23.99501pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 = Overfull \hbox (40.85487pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (30.57497pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 pa- Overfull \hbox (36.53493pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 ram- Overfull \hbox (25.01491pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 e- Overfull \hbox (35.4746pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 ters: Overfull \hbox (32.24474pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 dict Overfull \hbox (23.99501pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 = Overfull \hbox (39.5448pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (31.68495pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 En- Overfull \hbox (42.7948pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 abled: Overfull \hbox (35.0249pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 = Overfull \hbox (38.08485pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (78.5943pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (35.0249pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 = Overfull \hbox (41.58485pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 4471--4471 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4471--4471 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4471--4471 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4471--4471 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4471--4471 \T1/ptm/m/it/10 Pretty_Format: [74] Overfull \hbox (37.2345pt too wide) in paragraph at lines 4495--4495 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 str Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 = Overfull \hbox (10.85487pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (0.57497pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 pa- Overfull \hbox (6.53493pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 ram- Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 e- Overfull \hbox (5.4746pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 ters: Overfull \hbox (2.24474pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 dict Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 = Overfull \hbox (9.5448pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (1.68495pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 En- Overfull \hbox (12.7948pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 abled: Overfull \hbox (5.0249pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 = Overfull \hbox (8.08485pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (48.5943pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (5.0249pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 = Overfull \hbox (11.58485pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 4520--4520 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4520--4520 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4520--4520 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 4520--4520 \T1/ptm/m/it/10 Pretty_Format: [75] Underfull \hbox (badness 10000) in paragraph at lines 4577--4577 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , Overfull \hbox (24.52415pt too wide) in paragraph at lines 4577--4577 \T1/ptm/m/it/10 var_gene_randomness_type: Underfull \hbox (badness 10000) in paragraph at lines 4577--4577 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 4578--4580 \T1/ptm/m/n/10 Sets up the de-fault pa-ram-e-ters for par-a-site ge-net-ics sim -u-la-tions Malaria_Model = [76] Underfull \hbox (badness 10000) in paragraph at lines 4718--4718 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 species_name: Underfull \hbox (badness 10000) in paragraph at lines 4718--4718 [][]\T1/ptm/m/it/10 str[][]\T1/ptm/m/n/10 , \T1/ptm/m/it/10 habi-tat_type: [][] str[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7631) in paragraph at lines 4719--4722 \T1/ptm/m/n/10 Set the Max_Larval_Capacity for a given species and habi-tat. 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(rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on institute-for-disease-modeling-emodpy-malaria.pdf (89 pages, 333901 bytes). Transcript written on institute-for-disease-modeling-emodpy-malaria.log. Latexmk: Index file 'institute-for-disease-modeling-emodpy-malaria.idx' was written Latexmk: Missing input file: 'institute-for-disease-modeling-emodpy-malaria.ind' from line 'No file institute-for-disease-modeling-emodpy-malaria.ind.' Latexmk: References changed. Latexmk: References changed. Latexmk: Log file says output to 'institute-for-disease-modeling-emodpy-malaria.pdf' Latexmk: Log file says output to 'institute-for-disease-modeling-emodpy-malaria.pdf' Latexmk: List of undefined refs and citations: Reference `emodpy_malaria.demographics.MalariaDemographics:module-emodpy_malaria.demographics.MalariaDemographics' on page 85 undefined on input line 5293 Reference `emodpy_malaria.demographics:module-emodpy_malaria.demographics' on page 85 undefined on input line 5292 Reference `emodpy_malaria.interventions.bednet:module-emodpy_malaria.interventions.bednet' on page 85 undefined on input line 5295 Reference `emodpy_malaria.interventions.common:module-emodpy_malaria.interventions.common' on page 85 undefined on input line 5296 Reference `emodpy_malaria.interventions.community_health_worker:module-emodpy_malaria.interventions.community_health_worker' on page 85 undefined on input line 5297 Reference `emodpy_malaria.interventions.diag_survey:module-emodpy_malaria.interventions.diag_survey' on page 85 undefined on input line 5298 Reference `emodpy_malaria.interventions.drug:module-emodpy_malaria.interventions.drug' on page 85 undefined on input line 5299 Reference `emodpy_malaria.interventions.drug_campaign:module-emodpy_malaria.interventions.drug_campaign' on page 85 undefined on input line 5300 Reference `emodpy_malaria.interventions.inputeir:module-emodpy_malaria.interventions.inputeir' on page 85 undefined on input line 5301 Reference `emodpy_malaria.interventions.irs:module-emodpy_malaria.interventions.irs' on page 85 undefined on input line 5302 Reference `emodpy_malaria.interventions.ivermectin:module-emodpy_malaria.interventions.ivermectin' on page 85 undefined on input line 5303 Reference `emodpy_malaria.interventions.mosquitorelease:module-emodpy_malaria.interventions.mosquitorelease' on page 85 undefined on input line 5304 Reference `emodpy_malaria.interventions.outbreak:module-emodpy_malaria.interventions.outbreak' on page 85 undefined on input line 5305 Reference `emodpy_malaria.interventions.outdoorrestkill:module-emodpy_malaria.interventions.outdoorrestkill' on page 85 undefined on input line 5306 Reference `emodpy_malaria.interventions.spacespraying:module-emodpy_malaria.interventions.spacespraying' on page 85 undefined on input line 5307 Reference `emodpy_malaria.interventions.sugartrap:module-emodpy_malaria.interventions.sugartrap' on page 85 undefined on input line 5308 Reference `emodpy_malaria.interventions.treatment_seeking:module-emodpy_malaria.interventions.treatment_seeking' on page 85 undefined on input line 5309 Reference `emodpy_malaria.interventions.udbednet:module-emodpy_malaria.interventions.udbednet' on page 85 undefined on input line 5310 Reference `emodpy_malaria.interventions.vaccine:module-emodpy_malaria.interventions.vaccine' on page 85 undefined on input line 5311 Reference `emodpy_malaria.interventions:module-emodpy_malaria.interventions' on page 85 undefined on input line 5294 Reference `emodpy_malaria.malaria_config:module-emodpy_malaria.malaria_config' on page 85 undefined on input line 5312 Reference `emodpy_malaria.malaria_vector_species_params:module-emodpy_malaria.malaria_vector_species_params' on page 85 undefined on input line 5313 Reference `emodpy_malaria.reporters.builtin:module-emodpy_malaria.reporters.builtin' on page 85 undefined on input line 5315 Reference `emodpy_malaria.reporters:module-emodpy_malaria.reporters' on page 85 undefined on input line 5314 Reference `emodpy_malaria.vector_config:module-emodpy_malaria.vector_config' on page 85 undefined on input line 5316 Reference `emodpy_malaria:module-emodpy_malaria' on page 85 undefined on input line 5291 Latexmk: Summary of warnings: Latex failed to resolve 26 reference(s) Rule 'makeindex institute-for-disease-modeling-emodpy-malaria.idx': File changes, etc: Non-existent destination files: 'institute-for-disease-modeling-emodpy-malaria.ind' ------------ Run number 1 of rule 'makeindex institute-for-disease-modeling-emodpy-malaria.idx' ------------ ------------ Running 'makeindex -s python.ist -o "institute-for-disease-modeling-emodpy-malaria.ind" "institute-for-disease-modeling-emodpy-malaria.idx"' ------------ Latexmk: applying rule 'makeindex institute-for-disease-modeling-emodpy-malaria.idx'... 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(/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./institute-for-disease-modeling-emodpy-malaria.out) (./institute-for-disease-modeling-emodpy-malaria.out) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd)<><><><> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] [2] (./institute-for-disease-modeling-emodpy-malaria.toc) [1] [2] [1] [2] Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) [3] [4] Chapter 2. [5] [6] [7] Overfull \hbox (18.03041pt too wide) in paragraph at lines 381--382 \T1/ptm/m/n/10 You need to spec-ify `^^Uindex-url = [][]$https : /$[][]/@idmod.org:@packages.idmod.org/api/pypi/pypi- [8] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [9] [10] [11] [12] Chapter 3. Overfull \hbox (25.07484pt too wide) in paragraph at lines 684--684 []\T1/ptm/m/it/10 nodes\T1/ptm/m/n/10 , Overfull \hbox (59.9842pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 idref=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Gridded Overfull \hbox (22.58472pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 world Overfull \hbox (70.45445pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 grump2.5arcmin\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Overfull \hbox (65.15454pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 base_file=None\T1/ptm/m/n/10 , Overfull \hbox (56.58455pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 init_prev=0.2\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 in- Overfull \hbox (139.11363pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 clude_biting_heterogeneity=True\T1/pcr/m/n/10 ) [13] Underfull \hbox (badness 10000) in paragraph at lines 771--771 []\T1/ptm/m/it/10 lat=0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 771--771 \T1/ptm/m/it/10 lon=0\T1/ptm/m/n/10 , Overfull \hbox (23.99501pt too wide) in paragraph at lines 771--771 \T1/ptm/m/it/10 pop=1000000.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 771--771 \T1/ptm/m/it/10 name=1\T1/ptm/m/n/10 , Overfull \hbox (9.45456pt too wide) in paragraph at lines 771--771 \T1/ptm/m/it/10 forced_id=1\T1/ptm/m/n/10 , Overfull \hbox (14.58455pt too wide) in paragraph at lines 771--771 \T1/ptm/m/it/10 init_prev=0.2\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 771--771 \T1/ptm/m/it/10 in- Overfull \hbox (97.11363pt too wide) in paragraph at lines 771--771 \T1/ptm/m/it/10 clude_biting_heterogeneity=True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 807--807 []\T1/ptm/m/it/10 pop_filename_in\T1/ptm/m/n/10 , Overfull \hbox (106.44351pt too wide) in paragraph at lines 807--807 \T1/ptm/m/it/10 pop_filename_out=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 spatial_grid ded_pop_dir\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , [14] Underfull \hbox (badness 10000) in paragraph at lines 833--833 []\T1/ptm/m/it/10 input_file\T1/ptm/m/n/10 , Overfull \hbox (15.84473pt too wide) in paragraph at lines 833--833 \T1/ptm/m/it/10 res=0.008333333333333333\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 859--859 []\T1/ptm/m/it/10 tot_pop=1000000.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 859--859 \T1/ptm/m/it/10 num_nodes=100\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 859--859 \T1/ptm/m/it/10 frac_rural=0.3\T1/ptm/m/n/10 , Overfull \hbox (9.35394pt too wide) in paragraph at lines 859--859 \T1/ptm/m/it/10 id_ref=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 from_params\TS1/ptm/m/ it/10 '\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 903--903 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block-ing_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 903--903 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block- Underfull \hbox (badness 10000) in paragraph at lines 903--903 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 903--903 \T1/ptm/m/it/10 killing_predecay_duration: Underfull \hbox (badness 10000) in paragraph at lines 903--903 [][]\T1/ptm/m/it/10 int[][] = 1460\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 903--903 \T1/ptm/m/it/10 pelling_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 903--903 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 903--903 \T1/ptm/m/it/10 pelling_predecay_duration: Underfull \hbox (badness 10000) in paragraph at lines 903--903 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us- Underfull \hbox (badness 10000) in paragraph at lines 903--903 \T1/ptm/m/it/10 us-age_predecay_duration: [15] Underfull \hbox (badness 10000) in paragraph at lines 928--928 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block-ing_pre decay_duration: Underfull \hbox (badness 10000) in paragraph at lines 928--928 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_decay _rate: [][]float[][] Underfull \hbox (badness 10000) in paragraph at lines 928--928 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_predecay_duration: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 928--928 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-pelling_decay_rate: [] []float[][] = Underfull \hbox (badness 10000) in paragraph at lines 928--928 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-pelling_predecay_duration: [][]int[][] = Underfull \hbox (badness 5091) in paragraph at lines 928--928 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us-age_decay_rate: [][]floa t[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us- [16] Underfull \hbox (badness 10000) in paragraph at lines 1005--1005 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age=1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1005--1005 \T1/ptm/m/it/10 block-ing_eff=1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_eff=1\T 1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 1048--1048 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , [17] Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age_by_ages: Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 itn_bednet: Overfull \hbox (109.64275pt too wide) in paragraph at lines 1074--1074 [][]\T1/ptm/m/n/10 emodpy_malaria.interventions.bednet.BednetIntervention[][] Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block-ing_eff: Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 [][]\T1/ptm/m/it/10 float[][] = 0.9\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block- Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 = 0.000136986301369863\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 killing_eff: [][]float[][] = 0.6\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 killing_predecay_duration: Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 killing_decay_rate: [][]float[][] Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 = 0.000136986301369863\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 [][]\T1/ptm/m/it/10 int[][] = 1095\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 ing_itn_event_name: [][]str[][] Underfull \hbox (badness 10000) in paragraph at lines 1085--1089 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"coverage":1,"min": 1, "max": 10}, { "coverage":1, Underfull \hbox (badness 10000) in paragraph at lines 1085--1089 \T1/pcr/m/n/10 "min": 11, "max": 50},{ "coverage":0.5, "birth":"birth", [18] Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 event_name: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age_by_ages: Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 itn_bednet: Overfull \hbox (60.91318pt too wide) in paragraph at lines 1142--1142 [][]\T1/ptm/m/n/10 emodpy_malaria.interventions.bednet.Bednet[][] Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1148--1148 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start: [][]int[][] = 0\T 1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Underfull \hbox (badness 10000) in paragraph at lines 1148--1148 [][]\T1/ptm/m/it/10 emod_api.schema_to_class.ReadOnlyDict[][] Underfull \hbox (badness 7308) in paragraph at lines 1148--1148 [][]\T1/ptm/m/it/10 str[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_propert y_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1148--1148 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_propert y_restrictions: Underfull \hbox (badness 6477) in paragraph at lines 1148--1148 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-gered_ campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1161--1165 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"coverage":1,"min": 1, "max": 10}, { "coverage":1, Underfull \hbox (badness 10000) in paragraph at lines 1161--1165 \T1/pcr/m/n/10 "min": 11, "max": 50},{ "coverage":0.5, "birth":"birth", [19] Underfull \hbox (badness 10000) in paragraph at lines 1223--1233 \T1/ptm/m/n/10 camp = DTK-Con-fig-Builder.from_defaults(sim_example) cov-er-age _by_ages = [{^^Pcov-er-age^^Q: 1, Underfull \hbox (badness 10000) in paragraph at lines 1223--1233 \T1/ptm/m/n/10 ^^Pmin^^Q: 1, ^^Pmax^^Q: 10}, {^^Pcov-er-age^^Q: 0.75, ^^Pmin^^Q : 11, ^^Pmax^^Q: 60}] add_ITN(camp, Underfull \hbox (badness 10000) in paragraph at lines 1223--1233 \T1/ptm/m/n/10 start=1, cov-er-age_by_ages, nodeIDs=[2, 5, 7, 21], node_propert y_restrictions=[{^^PPlace^^Q: ^^PUr- Underfull \hbox (badness 10000) in paragraph at lines 1223--1233 \T1/ptm/m/n/10 ban^^Q}], ind_property_restrictions=[{^^PBiting_Risk^^Q: ^^PHigh ^^Q], trig-gered_campaign_delay=14, trig- Underfull \hbox 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\hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , Overfull \hbox (59.02464pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 trig- Overfull \hbox (117.814pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ger_condition_list: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (54.01491pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 de- Overfull \hbox (56.79494pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 mo- Overfull \hbox (116.73457pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (56.24501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , Overfull \hbox (80.6847pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 node_ids: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (146.53346pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ind_property_restrictions: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (153.19351pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 node_property_restrictions: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 tar- Overfull \hbox (95.93463pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 get_age_min: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 tar- Overfull \hbox (97.59468pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 get_age_max: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (58.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 tar- Overfull \hbox (89.3646pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 get_gender: Overfull \hbox (51.80469pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (59.69456pt too wide) in paragraph at lines 1355--1355 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Overfull \hbox (55.13475pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ini- Overfull \hbox (92.9145pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 tial_amount: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 6\T1/ptm/m/n/10 , Overfull \hbox (128.46431pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 amount_in_shipment: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (145.67392pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 days_between_shipments: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 7\T1/ptm/m/n/10 , Overfull \hbox (54.57497pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 du- Overfull \hbox (53.31496pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ra- Overfull \hbox (60.13475pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 tion: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (97.43495pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 3.40282e+38\T1/ptm/m/n/10 , Overfull \hbox (52.35486pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 in- Overfull \hbox (55.48474pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ter- Overfull \hbox (58.45485pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ven- Overfull \hbox (89.57469pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 tion_config: Overfull \hbox (55.68495pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 any Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (147.144pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 max_distributed_per_day: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (86.5846pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 max_stock: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (61.80467pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 wait- Overfull \hbox (88.46458pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ing_period: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (52.24501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 0\T1/pcr/m/n/10 ) [22] Overfull \vbox (355.66753pt too high) has occurred while \output is active [23] [24] Overfull \hbox (31.21352pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 get: [][]ob-ject[][] Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 5203) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag-nos- Overfull \hbox (63.55446pt too wide) in paragraph at lines 1444--1444 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 tic_threshold: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 float[][] = 40\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 mea-sure- Overfull \hbox (1.01384pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 event_name: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Di-ag- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 nos-tic Sur-vey\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (27.58405pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 tive_diagnosis_configs: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 neg-a- Overfull \hbox (27.58405pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 tive_diagnosis_configs: Overfull \hbox (6.95406pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ceived_test_event: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ceived_Test\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 IP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 NP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ing_properties: Overfull \hbox (9.814pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ing_duration: Overfull \hbox (29.97432pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (47.68343pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 check_eligibility_at_trigger: Overfull \hbox (9.71407pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 pire_recent_drugs: [25] Underfull \hbox (badness 10000) in paragraph at lines 1477--1480 []\T1/pcr/b/n/10 diagnostic_type \T1/ptm/m/n/10 ^^U Type of malaria di-ag-nos-t ic used. De-fault is Underfull \hbox (badness 10000) in paragraph at lines 1519--1522 []\T1/ptm/m/n/10 In ga-me-to-cytes/microliter, use mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1542--1544 []\T1/pcr/b/n/10 measurement_sensitivity \T1/ptm/m/n/10 ^^U Set-ting for \T1/pt m/b/n/10 Mea-sure-ment_Sensitivity \T1/ptm/m/n/10 in [26] Underfull \hbox (badness 10000) in paragraph at lines 1565--1570 []\T1/pcr/b/n/10 IP_restrictions \T1/ptm/m/n/10 ^^U List of In-di-vid-u-al-Prop -erty key:value pairs that Underfull \hbox (badness 10000) in paragraph at lines 1565--1570 \T1/ptm/m/n/10 in-di-vid-u-als must have to re-ceive the di-ag-nos-tic in-ter-v en-tion. For Underfull \hbox (badness 10000) in paragraph at lines 1565--1570 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue 1"}, Underfull \hbox (badness 10000) in paragraph at lines 1572--1577 []\T1/pcr/b/n/10 NP_restrictions \T1/ptm/m/n/10 ^^U List of Node-Prop-erty key: value pairs Underfull \hbox (badness 10000) in paragraph at lines 1572--1577 \T1/ptm/m/n/10 that nodes must have to re-ceive the di-ag-nos-tic in-ter-ven-ti on. Underfull \hbox (badness 10000) in paragraph at lines 1572--1577 \T1/ptm/m/n/10 For ex-am-ple, \T1/pcr/m/n/10 [{"NodeProperty1":"PropertyValue1" }, Underfull \hbox (badness 10000) in paragraph at lines 1579--1583 []\T1/pcr/b/n/10 disqualifying_properties \T1/ptm/m/n/10 ^^U List of In-di-vid- u-al-Prop-erty Underfull \hbox (badness 10000) in paragraph at lines 1579--1583 \T1/ptm/m/n/10 key:value pairs that cause an in-ter-ven-tion to be aborted. For ex- Underfull \hbox (badness 10000) in paragraph at lines 1579--1583 \T1/ptm/m/n/10 am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue1"} , Underfull \hbox (badness 10000) in paragraph at lines 1602--1605 []\T1/pcr/b/n/10 expire_recent_drugs \T1/ptm/m/n/10 ^^U Adds \T1/pcr/m/n/10 [{" DrugStatus:None"}] \T1/ptm/m/n/10 to \T1/ptm/b/n/10 Prop- [27] Underfull \hbox (badness 10000) in paragraph at lines 1691--1691 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1691--1691 \T1/ptm/m/it/10 drug_code: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cam- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 paign_type: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 MDA\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6775) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: Overfull \hbox (19.21352pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 7344) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag- Overfull \hbox (51.55446pt too wide) in paragraph at lines 1722--1722 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 = 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 fmda_radius: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (6.22408pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 5667) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 balls: [][]int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 treat-ment_delay: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Overfull \hbox (17.97432pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 tar-get_group: Overfull \hbox (33.88365pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (33.19351pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (26.53346pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ing_properties: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ent_drug_configs: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 get_residents_only: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (35.68343pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 False\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Overfull \hbox (144.47322pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ing_drugs_event_name=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Received _Campaign_Drugs\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) [28] [29] [30] Underfull \hbox (badness 10000) in paragraph at lines 1873--1876 []\T1/pcr/b/n/10 ind_property_restrictions \T1/ptm/m/n/10 ^^U The set-ting for \T1/ptm/b/n/10 Prop- Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (57.71327pt too wide) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e-ti-tions: [][]int[ ][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 6348) in paragraph at lines 1918--1918 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][] list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (86.50304pt too wide) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 6032) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 ing_properties: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 trig-ger_condition_list: [][]list[][] = [31] Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 7504) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 treat-ment_delay: [][]int[ ][] Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure-ment_sensitivity: Underfull \hbox (badness 6063) in paragraph at lines 1933--1933 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [ ][]list[][] Overfull \hbox (92.50304pt too wide) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1934--1937 \T1/ptm/m/n/10 Add an MSAT (mass screen-ing and treat-ment) drug in-ter-ven-tio n to your cam-paign. See [32] Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 7221) in paragraph at lines 1948--1948 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [ ][]float[][] Underfull \hbox (badness 7595) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (92.50304pt too wide) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 7869) in paragraph at lines 1949--1952 \T1/ptm/m/n/10 Add an fMDA (fo-cal mass drug ad-min-is-tra-tion) drug in-ter-ve n-tion to your cam-paign. See Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 6141) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (75.71327pt too wide) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Overfull \hbox (9.55446pt too wide) in paragraph at lines 1963--1963 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (104.50304pt too wide) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- [33] Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (69.71327pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 7613) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_covera ge: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS-TANCE_ONLY\ TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 node_ids: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (98.50304pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1993--1993 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ev ent_trigger: [34] Underfull \hbox (badness 5756) in paragraph at lines 2025--2025 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 daily_eir: [][]list[][] Underfull \hbox (badness 5091) in paragraph at lines 2059--2059 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][]l ist[][] = None\T1/ptm/m/n/10 , [35] Underfull \hbox (badness 10000) in paragraph at lines 2099--2099 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2099--2099 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , [36] Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Overfull \hbox (11.51352pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (38.20403pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 killing_box_duration_days: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (98.1333pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 killing_exponential_decay_constant_days: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 int[][] = 90\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (13.73363pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 pelling_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (40.42413pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 pelling_box_duration_days: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (100.35341pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 pelling_exponential_decay_constant_days: [37] Underfull \hbox (badness 10000) in paragraph at lines 2232--2232 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n /10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 []\T1/ptm/m/it/10 schema_path_container\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 re-leased_number: Underfull \hbox (badness 5954) in paragraph at lines 2284--2284 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 leased_fraction: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 leased_infectious: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 leased_species: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 re-leased_genome: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , [38] Underfull \hbox (badness 10000) in paragraph at lines 2304--2306 []\T1/pcr/b/n/10 released_infectious \T1/ptm/m/n/10 ^^U The frac-tion of vec-to rs re-leased that Underfull \hbox (badness 10000) in paragraph at lines 2304--2306 \T1/ptm/m/n/10 are to be in-fec-tious. One can only use this fea-ture when Overfull \hbox (16.27205pt too wide) in paragraph at lines 2304--2306 \T1/ptm/m/n/10 `Malaria_Model'!='MALARIA_MECHANISTIC_MODEL_WITH_PARASITE_GENETI CS' Underfull \hbox (badness 10000) in paragraph at lines 2330--2330 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (16.35448pt too wide) in paragraph at lines 2330--2330 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2330--2330 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 2330--2330 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2330--2330 \T1/ptm/m/it/10 file- Overfull \hbox (2.35487pt too wide) in paragraph at lines 2330--2330 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [39] Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Overfull \hbox (2.73457pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (14.36418pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (52.97314pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (32.53346pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (39.19351pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 5359) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ig- Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 bool[][] = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (16.02399pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5893) in paragraph at lines 2380--2382 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [40] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2435--2435 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 de-mo- Overfull \hbox (38.73457pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 float[][] = Overfull \hbox (50.36418pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (2.6847pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 tions: Overfull \hbox (88.97314pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , Overfull \hbox (68.53346pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (75.19351pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 tar- Overfull \hbox (17.93463pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Overfull \hbox (19.59468pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (11.3646pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 str[][] = Overfull \hbox (26.75435pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (52.02399pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5077) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = - Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cre- Overfull \hbox (90.54375pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 ate_nucleotide_sequence_from: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BAR- Overfull \hbox (33.99452pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 CODE_STRING\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 bar- Overfull \hbox (13.79442pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 code_string: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (52.88371pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 drug_resistant_string: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (43.23422pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 msp_variant_value: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (64.34395pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 pfemp1_variants_values: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 bar- Overfull \hbox (155.51305pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 code_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (194.60234pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 drug_resistant_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = [41] Overfull \vbox (135.66997pt too high) has occurred while \output is active [42] Underfull \hbox (badness 5893) in paragraph at lines 2462--2464 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [43] Overfull \hbox (11.18481pt too wide) in paragraph at lines 2551--2551 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 de-mo- Overfull \hbox (44.73457pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 float[][] Underfull \hbox (badness 8151) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tar- Overfull \hbox (56.36418pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tions: Overfull \hbox (94.97314pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.19351pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tar- Overfull \hbox (23.93463pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (25.59468pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tar- Overfull \hbox (17.3646pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 ig- Overfull \hbox (32.75435pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (58.02399pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Overfull \hbox (10.34447pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 irbc_type: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 mi- Overfull \hbox (42.5643pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 nor_epitope_type: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (10.3446pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 msp_type: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = [44] Overfull \vbox (3.66997pt too high) has occurred while \output is active [45] Underfull \hbox (badness 5893) in paragraph at lines 2578--2580 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e- Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (22.97314pt too wide) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (2.53346pt too wide) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (9.19351pt too wide) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 get_age_min: [][]int[][] = [46] Underfull \hbox (badness 5893) in paragraph at lines 2662--2664 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [47] Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 \T1/ptm/m/it/10 cide_name: Overfull \hbox (29.51352pt too wide) in paragraph at lines 2703--2703 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (32.87419pt too wide) in paragraph at lines 2703--2703 \T1/ptm/m/it/10 killing_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (74.87367pt too wide) in paragraph at lines 2703--2703 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2745--2745 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spray_coverage: [48] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2770--2770 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2770--2770 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2770--2770 \T1/ptm/m/it/10 file- Underfull \hbox (badness 10000) in paragraph at lines 2770--2770 \T1/ptm/m/it/10 name: Underfull \hbox (badness 10000) in paragraph at lines 2770--2770 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 6893) in paragraph at lines 2787--2787 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[] [] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2831--2831 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , [49] Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 tar-gets: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 drug: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.88365pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 6204) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du- Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 ra-tion: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 broad- Overfull \hbox (41.29442pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 cast_event_name: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Overfull \hbox (48.38399pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 ceived_Treatment\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 2867--2871 []\T1/pcr/b/n/10 of individuals to target with the intervention. Default is Underfull \hbox (badness 10000) in paragraph at lines 2867--2871 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 properties\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 [ { "trigger":"NewClinicalCase","coverage":0. Underfull \hbox (badness 10000) in paragraph at lines 2867--2871 \T1/pcr/m/n/10 8,"agemin":15,"agemax":70, "seek":0.4,"rate":0.3}, Underfull \hbox (badness 10000) in paragraph at lines 2867--2871 \T1/pcr/m/n/10 {"trigger":"NewSevereCase","coverage":0.8,"seek":0.6, Underfull \hbox (badness 10000) in paragraph at lines 2885--2886 []\T1/pcr/b/n/10 must have to receive the intervention. For example, Underfull \hbox (badness 10000) in paragraph at lines 2885--2886 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 individuals\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 ["IndividualProperty1:PropertyValue1", [50] Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis- Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 \T1/ptm/m/it/10 0.0013698630136986301\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_e ff: Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 \T1/ptm/m/it/10 0.0006849315068493151\T1/ptm/m/n/10 , \T1/ptm/m/it/10 iv_name: Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Us-ageDe-pen-de ntBed-net\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 \T1/ptm/m/it/10 sonal_dependence: [][]dict[][] = None\T1/ptm/m/n/10 , [51] [52] Underfull \hbox (badness 10000) in paragraph at lines 3114--3114 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3114--3114 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [53] Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep- Underfull \hbox (badness 7273) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 e-ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (34.97314pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (14.53346pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (21.19351pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 7667) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 broad- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 cast_event: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac-cine_type: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ac-qui-si-tion- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 Block-ing\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac - Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 vac-cine_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 cine_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac- Overfull \hbox (29.97394pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 cine_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ef-fi- Overfull \hbox (2.56361pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 cacy_is_multiplicative: [54] Underfull \hbox (badness 5893) in paragraph at lines 3151--3153 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 3213--3213 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3213--3213 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [55] Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 clude_vector_state: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 ify_by: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 GENOME\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 com- Overfull \hbox (9.02399pt too wide) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 bine_similar_genomes: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spe- Overfull \hbox (102.76315pt too wide) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 cific_genome_combinations_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Overfull \hbox (64.54318pt too wide) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 lele_combinations_for_stratification: Overfull \hbox (2.32376pt too wide) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 les_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [56] Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 6893) in paragraph at lines 3347--3347 \T1/ptm/m/it/10 = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 \T1/ptm/m/it/10 ual_property_filter: Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 in-fec- Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 \T1/ptm/m/it/10 tious-ness_bins: Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (4.30418pt too wide) in paragraph at lines 3347--3347 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 7291) in paragraph at lines 3347--3347 [][]\T1/ptm/m/it/10 int[][] = 100\T1/ptm/m/n/10 , \T1/ptm/m/it/10 par-a- Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [57] Underfull \hbox (badness 10000) in paragraph at lines 3408--3408 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i- Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 nodes: Overfull \hbox (3.20416pt too wide) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 pretty_format: Overfull \hbox (15.2441pt too wide) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 port_description: [58] Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re-port-Malar- Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 i-aFil-tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 min_age_years: Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 max_age_years: Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 [][]\T1/ptm/m/it/10 float[][] = 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 has_interventions: Overfull \hbox (74.41385pt too wide) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 clude_30day_avg_infection_duration: [59] Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 start_day: Overfull \hbox (6.45485pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 re-port- Overfull \hbox (21.46431pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 re- Overfull \hbox (28.1245pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 port_filename: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Spa- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 tial-Re- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 port- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 Malar- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 i-aFil- Overfull \hbox (13.23434pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 spa- Overfull \hbox (56.87419pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 tial_output_channels: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 ^^PBlood_Smear_Gametocyte_Prevalence^^Q, ^^PBlood_Smear_Parasite _Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 ^^PCam-paign_Cost^^Q, ^^PDaily_Bites_Per_Human^^Q, ^^PDaily_EIR^ ^Q, ^^PDis-ease_Deaths^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 ^^PNew_Reported_Infections^^Q, ^^PNew_Severe_Cases^^Q, ^^PPCR_Ga metocyte_Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 ^^PPCR_Parasite_Prevalence^^Q, ^^PPfHRP2_Prevalence^^Q, ^^PPop-u -la-tion^^Q, ^^PPreva- Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 lence^^Q, ^^PRain-fall^^Q, ^^PRel-a-tive_Humidity^^Q, ^^PTrue_Pr evalence^^Q De-faults: [60] Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 6893) in paragraph at lines 3563--3563 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3584--3584 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 3584--3584 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- Underfull \hbox (badness 10000) in paragraph at lines 3584--3584 \T1/ptm/m/it/10 clude_infection_table: Underfull \hbox (badness 10000) in paragraph at lines 3584--3584 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- [61] Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 re-port-ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Overfull \hbox (10.30418pt too wide) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 port-ing_interval: Overfull \hbox (10.30418pt too wide) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (20.78384pt too wide) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 port_description: [62] [63] Underfull \hbox (badness 10000) in paragraph at lines 3801--3801 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3801--3801 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (26.78384pt too wide) in paragraph at lines 3801--3801 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 6526) in paragraph at lines 3801--3801 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3801--3801 \T1/ptm/m/it/10 ify_by_gender: Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (14.48471pt too wide) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 in-di- Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 vid- Overfull \hbox (74.78384pt too wide) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 [][]\T1/ptm/m/it/10 str[][] Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 strat- Overfull \hbox (35.68442pt too wide) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 ify_by_gender: [64] Overfull \hbox (47.85474pt too wide) in paragraph at lines 3869--3869 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (49.79494pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 man- Overfull \hbox (35.35486pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 i- Overfull \hbox (45.63463pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (46.26491pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 bar- Overfull \hbox (55.34474pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 codes: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (122.7736pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 drug_resistant_strings: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (148.3231pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 drug_resistant_statistic_type: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (240.52356pt too wide) in paragraph at lines 3869--3869 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 NUM_PEOPLE_WITH_RESISTANT_INFECTION\TS1/ptm/m /it/10 '\T1/ptm/m/n/10 , Overfull \hbox (68.48471pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 age_bins: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (40.35486pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 in- Overfull \hbox (40.35486pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 di- Overfull \hbox (44.7948pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 vid- Overfull \hbox (128.78384pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 ual_property_to_collect: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (36.0248pt too wide) in paragraph at lines 3869--3869 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Overfull \hbox (50.76463pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 strat- Overfull \hbox (89.68442pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 ify_by_gender: Overfull \hbox (39.8048pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (40.24501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 1\T1/pcr/m/n/10 ) [65] Underfull \hbox (badness 10000) in paragraph at lines 3920--3920 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Overfull \hbox (17.85474pt too wide) in paragraph at lines 3949--3949 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (19.79494pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 man- Overfull \hbox (5.35486pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 i- Overfull \hbox (15.63463pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (48.68404pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 species_list: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (22.85487pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (20.76463pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 strat- Overfull \hbox (60.89413pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 ify_by_species: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 in- Overfull \hbox (70.75449pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 clude_wolbachia: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 in- Overfull \hbox (65.80426pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 clude_gestation: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (16.26491pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 bar- Overfull \hbox (25.34474pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 codes: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (26.35487pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [66] Underfull \hbox (badness 10000) in paragraph at lines 3989--3989 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 event_list\T1/ptm/m/n/10 , Overfull \hbox (6.34352pt too wide) in paragraph at lines 3989--3989 \T1/ptm/m/it/10 only_include_events_in_list=True\T1/ptm/m/n/10 , [67] Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 36500000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 re- Overfull \hbox (15.2441pt too wide) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4052--4052 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4052--4052 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 4052--4052 \T1/ptm/m/it/10 En-abled: bool = [68] Underfull \hbox (badness 10000) in paragraph at lines 4100--4100 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4100--4100 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 4100--4100 \T1/ptm/m/it/10 En-abled: bool = Underfull \hbox (badness 10000) in paragraph at lines 4124--4124 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4124--4124 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4124--4124 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 4124--4124 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (55.2345pt too wide) in paragraph at lines 4149--4149 []\T1/ptm/m/it/10 class_name: Overfull \hbox (15.80469pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 str Overfull \hbox (11.99501pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 = Overfull \hbox (28.85487pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (18.57497pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 pa- Overfull \hbox (24.53493pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 ram- Overfull \hbox (13.01491pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 e- Overfull \hbox (23.4746pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 ters: Overfull \hbox (20.24474pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 dict Overfull \hbox (11.99501pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 = Overfull \hbox (27.5448pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (19.68495pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 En- Overfull \hbox (30.7948pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 abled: Overfull \hbox (23.0249pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 = Overfull \hbox (26.08485pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (66.5943pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (23.0249pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 = Overfull \hbox (29.58485pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) [69] Underfull \hbox (badness 5832) in paragraph at lines 4152--4157 \T1/ptm/m/n/10 The re-port can only be used when the sim-u-la-tion setup pa-ram -e-ter \T1/ptm/b/n/10 Malaria_Model \T1/ptm/m/n/10 is set to Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 4198--4198 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 bool = [70] Underfull \hbox (badness 10000) in paragraph at lines 4223--4223 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 4223--4223 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 6236) in paragraph at lines 4271--4271 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 4271--4271 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4271--4271 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , [71] Underfull \hbox (badness 10000) in paragraph at lines 4295--4295 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4295--4295 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4295--4295 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4295--4295 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4295--4295 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4324--4324 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4324--4324 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4324--4324 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4324--4324 \T1/ptm/m/it/10 En-abled: Overfull \hbox (6.5943pt too wide) in paragraph at lines 4324--4324 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 4368--4368 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 bool = [72] Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 str = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 bool = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (19.2345pt too wide) in paragraph at lines 4415--4415 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 e-ters: Underfull \hbox (badness 8151) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 dict = Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 abled: Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (30.5943pt too wide) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 Pretty_Format: [73] Overfull \hbox (67.2345pt too wide) in paragraph at lines 4443--4443 []\T1/ptm/m/it/10 class_name: Overfull \hbox (27.80469pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 str Overfull \hbox (23.99501pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 = Overfull \hbox (40.85487pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (30.57497pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 pa- Overfull \hbox (36.53493pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 ram- Overfull \hbox (25.01491pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 e- Overfull \hbox (35.4746pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 ters: Overfull \hbox (32.24474pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 dict Overfull \hbox (23.99501pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 = Overfull \hbox (39.5448pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (31.68495pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 En- Overfull \hbox (42.7948pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 abled: Overfull \hbox (35.0249pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 = Overfull \hbox (38.08485pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (78.5943pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (35.0249pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 = Overfull \hbox (41.58485pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 4471--4471 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4471--4471 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4471--4471 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4471--4471 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4471--4471 \T1/ptm/m/it/10 Pretty_Format: [74] Overfull \hbox (37.2345pt too wide) in paragraph at lines 4495--4495 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 str Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 = Overfull \hbox (10.85487pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (0.57497pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 pa- Overfull \hbox (6.53493pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 ram- Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 e- Overfull \hbox (5.4746pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 ters: Overfull \hbox (2.24474pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 dict Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 = Overfull \hbox (9.5448pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (1.68495pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 En- Overfull \hbox (12.7948pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 abled: Overfull \hbox (5.0249pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 = Overfull \hbox (8.08485pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (48.5943pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (5.0249pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 = Overfull \hbox (11.58485pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 4520--4520 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4520--4520 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4520--4520 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 4520--4520 \T1/ptm/m/it/10 Pretty_Format: [75] Underfull \hbox (badness 10000) in paragraph at lines 4577--4577 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , Overfull \hbox (24.52415pt too wide) in paragraph at lines 4577--4577 \T1/ptm/m/it/10 var_gene_randomness_type: Underfull \hbox (badness 10000) in paragraph at lines 4577--4577 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 4578--4580 \T1/ptm/m/n/10 Sets up the de-fault pa-ram-e-ters for par-a-site ge-net-ics sim -u-la-tions Malaria_Model = [76] Underfull \hbox (badness 10000) in paragraph at lines 4718--4718 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 species_name: Underfull \hbox (badness 10000) in paragraph at lines 4718--4718 [][]\T1/ptm/m/it/10 str[][]\T1/ptm/m/n/10 , \T1/ptm/m/it/10 habi-tat_type: [][] str[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7631) in paragraph at lines 4719--4722 \T1/ptm/m/n/10 Set the Max_Larval_Capacity for a given species and habi-tat. Ef -fec-tively do-ing some-thing [77] [78] [79] Underfull \hbox (badness 10000) in paragraph at lines 5056--5056 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , \T1/ptm/m/it/10 in-sec- Underfull \hbox (badness 6675) in paragraph at lines 5056--5056 \T1/ptm/m/it/10 ti-cide_name: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 5939) in paragraph at lines 5056--5056 \T1/ptm/m/it/10 species: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 al- Underfull \hbox (badness 6047) in paragraph at lines 5056--5056 \T1/ptm/m/it/10 block-ing: [][]float[][] = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5056--5056 \T1/ptm/m/it/10 pelling: [][]float[][] = 1.0\T1/ptm/m/n/10 , [80] Underfull \hbox (badness 10000) in paragraph at lines 5126--5126 \T1/ptm/m/it/10 driver_type: [][]str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 CL AS-SIC\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5126--5126 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 shred-ding_allele_required : Underfull \hbox (badness 10000) in paragraph at lines 5126--5126 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al-lele_shredding_fraction : Underfull \hbox (badness 10000) in paragraph at lines 5126--5126 [][]\T1/ptm/m/it/10 float[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Underfull \hbox (badness 10000) in paragraph at lines 5126--5126 \T1/ptm/m/it/10 lele_to_shred_to_surviving_fraction: [81] [82] Underfull \hbox (badness 10000) in paragraph at lines 5258--5258 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 species_name\T1/ptm/m/ n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5258--5258 \T1/ptm/m/it/10 habi-tat_type\T1/ptm/m/n/10 , Underfull \hbox (badness 7631) in paragraph at lines 5259--5262 \T1/ptm/m/n/10 Set the Max_Larval_Capacity for a given species and habi-tat. Ef -fec-tively do-ing some-thing [83] [84] Overfull \hbox (54.6225pt too wide) in paragraph at lines 5293--5294 []\T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 , Overfull \hbox (84.6225pt too wide) in paragraph at lines 5297--5298 []\T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/m/ n/10 , Overfull \hbox (12.6225pt too wide) in paragraph at lines 5298--5299 []\T1/pcr/m/n/10 emodpy_malaria.interventions.diag_survey\T1/ptm/m/n/10 , Overfull \hbox (24.6225pt too wide) in paragraph at lines 5300--5301 []\T1/pcr/m/n/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5301--5302 []\T1/pcr/m/n/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 , Overfull \hbox (6.6225pt too wide) in paragraph at lines 5303--5304 []\T1/pcr/m/n/10 emodpy_malaria.interventions.ivermectin\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 5304--5305 []\T1/pcr/m/n/10 emodpy_malaria.interventions.mosquitorelease\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5305--5306 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 5306--5307 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outdoorrestkill\T1/ptm/m/n/10 , Overfull \hbox (24.6225pt too wide) in paragraph at lines 5307--5308 []\T1/pcr/m/n/10 emodpy_malaria.interventions.spacespraying\T1/ptm/m/n/10 , Overfull \hbox (0.6225pt too wide) in paragraph at lines 5308--5309 []\T1/pcr/m/n/10 emodpy_malaria.interventions.sugartrap\T1/ptm/m/n/10 , Overfull \hbox (48.6225pt too wide) in paragraph at lines 5309--5310 []\T1/pcr/m/n/10 emodpy_malaria.interventions.treatment_seeking\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5310--5311 []\T1/pcr/m/n/10 emodpy_malaria.interventions.udbednet\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5311--5312 []\T1/pcr/m/n/10 emodpy_malaria.interventions.vaccine\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 5313--5314 []\T1/pcr/m/n/10 emodpy_malaria.malaria_vector_species_params\T1/ptm/m/n/10 , [85] (./institute-for-disease-modeling-emodpy-malaria.ind [86] Underfull \hbox (badness 10000) in paragraph at lines 8--10 []\T1/pcr/m/n/10 add_campaign_event() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 8--10 \T1/ptm/m/it/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Overfull \hbox (48.28003pt too wide) in paragraph at lines 10--12 \T1/ptm/m/it/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/m/n /10 ), Underfull \hbox (badness 10000) in paragraph at lines 12--14 []\T1/pcr/m/n/10 add_diagnostic_survey() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Underfull \hbox (badness 10000) in paragraph at lines 12--14 \T1/ptm/m/it/10 emodpy_malaria.interventions.diag_survey\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 14--16 []\T1/pcr/m/n/10 add_drug_campaign() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 14--16 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 16--18 []\T1/pcr/m/n/10 add_drug_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 18--20 []\T1/pcr/m/n/10 add_drug_status_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Underfull \hbox (badness 10000) in paragraph at lines 20--22 []\T1/pcr/m/n/10 add_event_recorder() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/pcr/m/n/10 add_fMDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 22--24 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 24--26 []\T1/pcr/m/n/10 add_genes_and_alleles() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Underfull \hbox (badness 10000) in paragraph at lines 28--30 []\T1/pcr/m/n/10 add_InputEIR() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 28--30 \T1/ptm/m/it/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 30--32 []\T1/pcr/m/n/10 add_insecticide_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 32--34 []\T1/pcr/m/n/10 add_insecticide_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 36--38 []\T1/pcr/m/n/10 add_ITN() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 38--40 []\T1/pcr/m/n/10 add_ITN_scheduled() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 40--42 []\T1/pcr/m/n/10 add_ITN_triggered() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 42--44 []\T1/pcr/m/n/10 add_larval_habitat_multiplier() Overfull \hbox (127.95007pt too wide) in paragraph at lines 42--44 \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics .MalariaDemographics Underfull \hbox (badness 10000) in paragraph at lines 46--48 []\T1/pcr/m/n/10 add_malaria_patient_json_report() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 48--50 []\T1/pcr/m/n/10 add_malaria_sql_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Underfull \hbox (badness 10000) in paragraph at lines 50--52 []\T1/pcr/m/n/10 add_malaria_summary_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 54--56 []\T1/pcr/m/n/10 add_malaria_transmission_report() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 56--58 []\T1/pcr/m/n/10 add_MDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 56--58 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 58--60 []\T1/pcr/m/n/10 add_MSAT() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 58--60 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 60--62 []\T1/pcr/m/n/10 add_mutation() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 62--64 []\T1/pcr/m/n/10 add_outbreak_individual() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in m od-ule Underfull \hbox (badness 10000) in paragraph at lines 62--64 \T1/ptm/m/it/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 64--66 \T1/ptm/m/it/10 ule emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 66--68 \T1/ptm/m/it/10 ule emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 68--70 []\T1/pcr/m/n/10 add_OutdoorRestKill() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 70--72 []\T1/pcr/m/n/10 add_report_event_counter() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 72--74 []\T1/pcr/m/n/10 add_report_intervention_pop_avg() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/pcr/m/n/10 add_report_node_demographics_malaria() [87] Overfull \hbox (52.1225pt too wide) in paragraph at lines 80--82 []\T1/pcr/m/n/10 add_report_node_demographics_malaria_genetics() Underfull \hbox (badness 10000) in paragraph at lines 82--84 []\T1/pcr/m/n/10 add_report_vector_genetics() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 86--88 []\T1/pcr/m/n/10 add_report_vector_stats() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in m od-ule Overfull \hbox (22.1225pt too wide) in paragraph at lines 88--90 []\T1/pcr/m/n/10 add_report_vector_stats_malaria_genetics() Underfull \hbox (badness 10000) in paragraph at lines 90--92 []\T1/pcr/m/n/10 add_rfMDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 90--92 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 92--94 []\T1/pcr/m/n/10 add_rfMSAT() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 92--94 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 94--96 []\T1/pcr/m/n/10 add_scheduled_vaccine() 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(badness 10000) in paragraph at lines 120--122 []\T1/pcr/m/n/10 BednetIntervention() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Overfull \hbox (59.0599pt too wide) in paragraph at lines 125--127 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaImmunityReport Overfull \hbox (72.70978pt too wide) in paragraph at lines 127--129 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaPatientJSONReport Overfull \hbox (34.07018pt too wide) in paragraph at lines 129--131 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSqlReport Overfull \hbox (59.06006pt too wide) in paragraph at lines 131--133 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSummaryReport Overfull \hbox (79.58981pt too wide) in paragraph at lines 133--135 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report 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at lines 145--147 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographics Overfull \hbox (101.02975pt too wide) in paragraph at lines 147--149 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographicsMalaria Overfull \hbox (136.01923pt too wide) in paragraph at lines 149--151 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographicsMalariaGenetics Overfull \hbox (125.03925pt too wide) in paragraph at lines 151--153 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportSimpleMalariaTransmissionJSON Overfull \hbox (49.04977pt too wide) in paragraph at lines 153--155 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportVectorGenetics Overfull \hbox (54.46992pt too wide) in paragraph at lines 155--157 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportVectorMigration Overfull \hbox (33.50998pt too wide) in paragraph at lines 157--159 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportVectorStats Overfull \hbox (101.27908pt too wide) in paragraph at lines 159--161 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportVectorStatsMalariaGenetics Overfull \hbox (81.02942pt too wide) in paragraph at lines 161--163 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.SpatialReportMalariaFiltered Overfull \hbox (44.61995pt too wide) in paragraph at lines 163--165 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.VectorHabitatReport Underfull \hbox (badness 10000) in paragraph at lines 168--170 []\T1/pcr/m/n/10 drug_configs_from_code() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 168--170 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Overfull \hbox (52.1225pt too wide) in paragraph at lines 177--178 []\T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics [88] Overfull \hbox (82.1225pt too wide) in paragraph at lines 185--186 []\T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker Overfull \hbox (10.1225pt too wide) in paragraph at lines 187--188 []\T1/pcr/m/n/10 emodpy_malaria.interventions.diag_survey Overfull \hbox (22.1225pt too wide) in paragraph at lines 191--192 []\T1/pcr/m/n/10 emodpy_malaria.interventions.drug_campaign Overfull \hbox (4.1225pt too wide) in paragraph at lines 197--198 []\T1/pcr/m/n/10 emodpy_malaria.interventions.ivermectin Overfull \hbox (34.1225pt too wide) in paragraph at lines 199--200 []\T1/pcr/m/n/10 emodpy_malaria.interventions.mosquitorelease Overfull \hbox (34.1225pt too wide) in paragraph at lines 203--204 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outdoorrestkill Overfull \hbox (22.1225pt too wide) in paragraph at lines 205--206 []\T1/pcr/m/n/10 emodpy_malaria.interventions.spacespraying Overfull \hbox (46.1225pt too wide) in paragraph at lines 209--210 []\T1/pcr/m/n/10 emodpy_malaria.interventions.treatment_seeking Overfull \hbox (34.1225pt too wide) in paragraph at lines 217--218 []\T1/pcr/m/n/10 emodpy_malaria.malaria_vector_species_params Underfull \hbox (badness 10000) in paragraph at lines 228--230 []\T1/pcr/m/n/10 fmda_cfg() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 228--230 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 230--232 []\T1/pcr/m/n/10 from_csv() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (36.54083pt too wide) in paragraph at lines 230--232 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 232--234 []\T1/pcr/m/n/10 from_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (36.54083pt too wide) in paragraph at lines 232--234 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 234--236 []\T1/pcr/m/n/10 from_pop_csv() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (36.54083pt too wide) in paragraph at lines 234--236 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 236--238 []\T1/pcr/m/n/10 from_template_node() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Overfull \hbox (36.54083pt too wide) in paragraph at lines 236--238 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 241--243 []\T1/pcr/m/n/10 get_drug_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 243--245 []\T1/pcr/m/n/10 get_file_from_http() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 245--247 []\T1/pcr/m/n/10 get_species_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 247--249 []\T1/pcr/m/n/10 get_species_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 252--254 []\T1/pcr/m/n/10 InputEIR() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 252--254 \T1/ptm/m/it/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 254--256 []\T1/pcr/m/n/10 Ivermectin() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 254--256 \T1/ptm/m/it/10 emodpy_malaria.interventions.ivermectin\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 259--261 []\T1/pcr/m/n/10 MalariaDemographics \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Overfull \hbox (36.54083pt too wide) in paragraph at lines 259--261 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 261--263 []\T1/pcr/m/n/10 MalariaDiagnostic() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 261--263 \T1/ptm/m/it/10 emodpy_malaria.interventions.common\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 263--265 []\T1/pcr/m/n/10 MalariaImmunityReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 265--267 []\T1/pcr/m/n/10 MalariaPatientJSONReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 267--269 []\T1/pcr/m/n/10 MalariaSqlReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox 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(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty)) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) (./sphinxmessages.sty) Writing index file institute-for-disease-modeling-emodpy-malaria.idx (./institute-for-disease-modeling-emodpy-malaria.aux) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmr.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1ptm.fd) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) *geometry* driver: auto-detecting *geometry* detected driver: pdftex (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (./institute-for-disease-modeling-emodpy-malaria.out) (./institute-for-disease-modeling-emodpy-malaria.out) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd)<><><><> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] [2] (./institute-for-disease-modeling-emodpy-malaria.toc) [1] [2] [1] [2] Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) [3] [4] Chapter 2. [5] [6] [7] Overfull \hbox (18.03041pt too wide) in paragraph at lines 381--382 \T1/ptm/m/n/10 You need to spec-ify `^^Uindex-url = [][]$https : /$[][]/@idmod.org:@packages.idmod.org/api/pypi/pypi- [8] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [9] [10] [11] [12] Chapter 3. Overfull \hbox (25.07484pt too wide) in paragraph at lines 684--684 []\T1/ptm/m/it/10 nodes\T1/ptm/m/n/10 , Overfull \hbox (59.9842pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 idref=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Gridded Overfull \hbox (22.58472pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 world Overfull \hbox (70.45445pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 grump2.5arcmin\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Overfull \hbox (65.15454pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 base_file=None\T1/ptm/m/n/10 , Overfull \hbox (56.58455pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 init_prev=0.2\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 in- Overfull \hbox (139.11363pt too wide) in paragraph at lines 684--684 \T1/ptm/m/it/10 clude_biting_heterogeneity=True\T1/pcr/m/n/10 ) [13] Underfull \hbox (badness 10000) in paragraph at lines 771--771 []\T1/ptm/m/it/10 lat=0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 771--771 \T1/ptm/m/it/10 lon=0\T1/ptm/m/n/10 , Overfull \hbox (23.99501pt too wide) in paragraph at lines 771--771 \T1/ptm/m/it/10 pop=1000000.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 771--771 \T1/ptm/m/it/10 name=1\T1/ptm/m/n/10 , Overfull \hbox (9.45456pt too wide) in paragraph at lines 771--771 \T1/ptm/m/it/10 forced_id=1\T1/ptm/m/n/10 , Overfull \hbox (14.58455pt too wide) in paragraph at lines 771--771 \T1/ptm/m/it/10 init_prev=0.2\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 771--771 \T1/ptm/m/it/10 in- Overfull \hbox (97.11363pt too wide) in paragraph at lines 771--771 \T1/ptm/m/it/10 clude_biting_heterogeneity=True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 807--807 []\T1/ptm/m/it/10 pop_filename_in\T1/ptm/m/n/10 , Overfull \hbox (106.44351pt too wide) in paragraph at lines 807--807 \T1/ptm/m/it/10 pop_filename_out=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 spatial_grid ded_pop_dir\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , [14] Underfull \hbox (badness 10000) in paragraph at lines 833--833 []\T1/ptm/m/it/10 input_file\T1/ptm/m/n/10 , Overfull \hbox (15.84473pt too wide) in paragraph at lines 833--833 \T1/ptm/m/it/10 res=0.008333333333333333\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 859--859 []\T1/ptm/m/it/10 tot_pop=1000000.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 859--859 \T1/ptm/m/it/10 num_nodes=100\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 859--859 \T1/ptm/m/it/10 frac_rural=0.3\T1/ptm/m/n/10 , Overfull \hbox (9.35394pt too wide) in paragraph at lines 859--859 \T1/ptm/m/it/10 id_ref=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 from_params\TS1/ptm/m/ it/10 '\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 903--903 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block-ing_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 903--903 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block- Underfull \hbox (badness 10000) in paragraph at lines 903--903 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 903--903 \T1/ptm/m/it/10 killing_predecay_duration: Underfull \hbox (badness 10000) in paragraph at lines 903--903 [][]\T1/ptm/m/it/10 int[][] = 1460\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 903--903 \T1/ptm/m/it/10 pelling_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 903--903 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 903--903 \T1/ptm/m/it/10 pelling_predecay_duration: Underfull \hbox (badness 10000) in paragraph at lines 903--903 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us- Underfull \hbox (badness 10000) in paragraph at lines 903--903 \T1/ptm/m/it/10 us-age_predecay_duration: [15] Underfull \hbox (badness 10000) in paragraph at lines 928--928 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block-ing_pre decay_duration: Underfull \hbox (badness 10000) in paragraph at lines 928--928 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_decay _rate: [][]float[][] Underfull \hbox (badness 10000) in paragraph at lines 928--928 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_predecay_duration: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 928--928 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-pelling_decay_rate: [] []float[][] = Underfull \hbox (badness 10000) in paragraph at lines 928--928 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-pelling_predecay_duration: [][]int[][] = Underfull \hbox (badness 5091) in paragraph at lines 928--928 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us-age_decay_rate: [][]floa t[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us- [16] Underfull \hbox (badness 10000) in paragraph at lines 1005--1005 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age=1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1005--1005 \T1/ptm/m/it/10 block-ing_eff=1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_eff=1\T 1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 1048--1048 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , [17] Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age_by_ages: Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 itn_bednet: Overfull \hbox (109.64275pt too wide) in paragraph at lines 1074--1074 [][]\T1/ptm/m/n/10 emodpy_malaria.interventions.bednet.BednetIntervention[][] Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block-ing_eff: Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 [][]\T1/ptm/m/it/10 float[][] = 0.9\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block- Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 = 0.000136986301369863\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 killing_eff: [][]float[][] = 0.6\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 killing_predecay_duration: Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 killing_decay_rate: [][]float[][] Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 = 0.000136986301369863\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 [][]\T1/ptm/m/it/10 int[][] = 1095\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Underfull \hbox (badness 10000) in paragraph at lines 1074--1074 \T1/ptm/m/it/10 ing_itn_event_name: [][]str[][] Underfull \hbox (badness 10000) in paragraph at lines 1085--1089 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"coverage":1,"min": 1, "max": 10}, { "coverage":1, Underfull \hbox (badness 10000) in paragraph at lines 1085--1089 \T1/pcr/m/n/10 "min": 11, "max": 50},{ "coverage":0.5, "birth":"birth", [18] Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 event_name: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age_by_ages: Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 itn_bednet: Overfull \hbox (60.91318pt too wide) in paragraph at lines 1142--1142 [][]\T1/ptm/m/n/10 emodpy_malaria.interventions.bednet.Bednet[][] Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 1142--1142 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1148--1148 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start: [][]int[][] = 0\T 1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Underfull \hbox (badness 10000) in paragraph at lines 1148--1148 [][]\T1/ptm/m/it/10 emod_api.schema_to_class.ReadOnlyDict[][] Underfull \hbox (badness 7308) in paragraph at lines 1148--1148 [][]\T1/ptm/m/it/10 str[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_propert y_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1148--1148 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_propert y_restrictions: Underfull \hbox (badness 6477) in paragraph at lines 1148--1148 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-gered_ campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1161--1165 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"coverage":1,"min": 1, "max": 10}, { "coverage":1, Underfull \hbox (badness 10000) in paragraph at lines 1161--1165 \T1/pcr/m/n/10 "min": 11, "max": 50},{ "coverage":0.5, "birth":"birth", [19] Underfull \hbox (badness 10000) in paragraph at lines 1223--1233 \T1/ptm/m/n/10 camp = DTK-Con-fig-Builder.from_defaults(sim_example) cov-er-age _by_ages = [{^^Pcov-er-age^^Q: 1, Underfull \hbox (badness 10000) in paragraph at lines 1223--1233 \T1/ptm/m/n/10 ^^Pmin^^Q: 1, ^^Pmax^^Q: 10}, {^^Pcov-er-age^^Q: 0.75, ^^Pmin^^Q : 11, ^^Pmax^^Q: 60}] add_ITN(camp, Underfull \hbox (badness 10000) in paragraph at lines 1223--1233 \T1/ptm/m/n/10 start=1, cov-er-age_by_ages, nodeIDs=[2, 5, 7, 21], node_propert y_restrictions=[{^^PPlace^^Q: ^^PUr- Underfull \hbox (badness 10000) in paragraph at lines 1223--1233 \T1/ptm/m/n/10 ban^^Q}], ind_property_restrictions=[{^^PBiting_Risk^^Q: ^^PHigh ^^Q], trig-gered_campaign_delay=14, trig- Underfull \hbox 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1308--1308 \T1/ptm/m/it/10 ven-tion\T1/ptm/m/n/10 , Overfull \hbox (36.58427pt too wide) in paragraph at lines 1308--1308 \T1/ptm/m/it/10 ip_targeting=None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1308--1308 \T1/ptm/m/it/10 cov-er- Underfull \hbox (badness 10000) in paragraph at lines 1308--1308 \T1/ptm/m/it/10 age=1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1308--1308 \T1/ptm/m/it/10 tar- Overfull \hbox (22.85468pt too wide) in paragraph at lines 1308--1308 \T1/ptm/m/it/10 get_age_min=0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1308--1308 \T1/ptm/m/it/10 tar- Overfull \hbox (45.51472pt too wide) in paragraph at lines 1308--1308 \T1/ptm/m/it/10 get_age_max=125.0\T1/pcr/m/n/10 ) [21] Overfull \hbox (83.18481pt too wide) in paragraph at lines 1355--1355 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (82.35448pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 start_day: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , Overfull \hbox (59.02464pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 trig- Overfull \hbox (117.814pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ger_condition_list: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (54.01491pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 de- Overfull \hbox (56.79494pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 mo- Overfull \hbox (116.73457pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (56.24501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , Overfull \hbox (80.6847pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 node_ids: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (146.53346pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ind_property_restrictions: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (153.19351pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 node_property_restrictions: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 tar- Overfull \hbox (95.93463pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 get_age_min: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 tar- Overfull \hbox (97.59468pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 get_age_max: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (58.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 tar- Overfull \hbox (89.3646pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 get_gender: Overfull \hbox (51.80469pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (59.69456pt too wide) in paragraph at lines 1355--1355 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Overfull \hbox (55.13475pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ini- Overfull \hbox (92.9145pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 tial_amount: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 6\T1/ptm/m/n/10 , Overfull \hbox (128.46431pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 amount_in_shipment: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (145.67392pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 days_between_shipments: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 7\T1/ptm/m/n/10 , Overfull \hbox (54.57497pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 du- Overfull \hbox (53.31496pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ra- Overfull \hbox (60.13475pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 tion: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (97.43495pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 3.40282e+38\T1/ptm/m/n/10 , Overfull \hbox (52.35486pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 in- Overfull \hbox (55.48474pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ter- Overfull \hbox (58.45485pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ven- Overfull \hbox (89.57469pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 tion_config: Overfull \hbox (55.68495pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 any Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (147.144pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 max_distributed_per_day: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (86.5846pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 max_stock: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (61.80467pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 wait- Overfull \hbox (88.46458pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 ing_period: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1355--1355 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 = Overfull \hbox (52.24501pt too wide) in paragraph at lines 1355--1355 \T1/ptm/m/it/10 0\T1/pcr/m/n/10 ) [22] Overfull \vbox (355.66753pt too high) has occurred while \output is active [23] [24] Overfull \hbox (31.21352pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 get: [][]ob-ject[][] Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 5203) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag-nos- Overfull \hbox (63.55446pt too wide) in paragraph at lines 1444--1444 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 tic_threshold: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 float[][] = 40\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 mea-sure- Overfull \hbox (1.01384pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 event_name: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Di-ag- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 nos-tic Sur-vey\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (27.58405pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 tive_diagnosis_configs: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 neg-a- Overfull \hbox (27.58405pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 tive_diagnosis_configs: Overfull \hbox (6.95406pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ceived_test_event: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ceived_Test\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 IP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 NP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ing_properties: Overfull \hbox (9.814pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 ing_duration: Overfull \hbox (29.97432pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1444--1444 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (47.68343pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 check_eligibility_at_trigger: Overfull \hbox (9.71407pt too wide) in paragraph at lines 1444--1444 \T1/ptm/m/it/10 pire_recent_drugs: [25] Underfull \hbox (badness 10000) in paragraph at lines 1477--1480 []\T1/pcr/b/n/10 diagnostic_type \T1/ptm/m/n/10 ^^U Type of malaria di-ag-nos-t ic used. De-fault is Underfull \hbox (badness 10000) in paragraph at lines 1519--1522 []\T1/ptm/m/n/10 In ga-me-to-cytes/microliter, use mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1542--1544 []\T1/pcr/b/n/10 measurement_sensitivity \T1/ptm/m/n/10 ^^U Set-ting for \T1/pt m/b/n/10 Mea-sure-ment_Sensitivity \T1/ptm/m/n/10 in [26] Underfull \hbox (badness 10000) in paragraph at lines 1565--1570 []\T1/pcr/b/n/10 IP_restrictions \T1/ptm/m/n/10 ^^U List of In-di-vid-u-al-Prop -erty key:value pairs that Underfull \hbox (badness 10000) in paragraph at lines 1565--1570 \T1/ptm/m/n/10 in-di-vid-u-als must have to re-ceive the di-ag-nos-tic in-ter-v en-tion. For Underfull \hbox (badness 10000) in paragraph at lines 1565--1570 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue 1"}, Underfull \hbox (badness 10000) in paragraph at lines 1572--1577 []\T1/pcr/b/n/10 NP_restrictions \T1/ptm/m/n/10 ^^U List of Node-Prop-erty key: value pairs Underfull \hbox (badness 10000) in paragraph at lines 1572--1577 \T1/ptm/m/n/10 that nodes must have to re-ceive the di-ag-nos-tic in-ter-ven-ti on. Underfull \hbox (badness 10000) in paragraph at lines 1572--1577 \T1/ptm/m/n/10 For ex-am-ple, \T1/pcr/m/n/10 [{"NodeProperty1":"PropertyValue1" }, Underfull \hbox (badness 10000) in paragraph at lines 1579--1583 []\T1/pcr/b/n/10 disqualifying_properties \T1/ptm/m/n/10 ^^U List of In-di-vid- u-al-Prop-erty Underfull \hbox (badness 10000) in paragraph at lines 1579--1583 \T1/ptm/m/n/10 key:value pairs that cause an in-ter-ven-tion to be aborted. For ex- Underfull \hbox (badness 10000) in paragraph at lines 1579--1583 \T1/ptm/m/n/10 am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue1"} , Underfull \hbox (badness 10000) in paragraph at lines 1602--1605 []\T1/pcr/b/n/10 expire_recent_drugs \T1/ptm/m/n/10 ^^U Adds \T1/pcr/m/n/10 [{" DrugStatus:None"}] \T1/ptm/m/n/10 to \T1/ptm/b/n/10 Prop- [27] Underfull \hbox (badness 10000) in paragraph at lines 1691--1691 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1691--1691 \T1/ptm/m/it/10 drug_code: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cam- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 paign_type: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 MDA\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6775) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: Overfull \hbox (19.21352pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 7344) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag- Overfull \hbox (51.55446pt too wide) in paragraph at lines 1722--1722 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 = 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 fmda_radius: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (6.22408pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 5667) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 balls: [][]int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 treat-ment_delay: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Overfull \hbox (17.97432pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 tar-get_group: Overfull \hbox (33.88365pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (33.19351pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (26.53346pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ing_properties: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ent_drug_configs: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 get_residents_only: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (35.68343pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 False\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Overfull \hbox (144.47322pt too wide) in paragraph at lines 1722--1722 \T1/ptm/m/it/10 ing_drugs_event_name=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Received _Campaign_Drugs\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) [28] [29] [30] Underfull \hbox (badness 10000) in paragraph at lines 1873--1876 []\T1/pcr/b/n/10 ind_property_restrictions \T1/ptm/m/n/10 ^^U The set-ting for \T1/ptm/b/n/10 Prop- Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (57.71327pt too wide) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e-ti-tions: [][]int[ ][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 6348) in paragraph at lines 1918--1918 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][] list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (86.50304pt too wide) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 6032) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 ing_properties: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1918--1918 \T1/ptm/m/it/10 trig-ger_condition_list: [][]list[][] = [31] Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 7504) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 treat-ment_delay: [][]int[ ][] Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure-ment_sensitivity: Underfull \hbox (badness 6063) in paragraph at lines 1933--1933 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [ ][]list[][] Overfull \hbox (92.50304pt too wide) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 1933--1933 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1934--1937 \T1/ptm/m/n/10 Add an MSAT (mass screen-ing and treat-ment) drug in-ter-ven-tio n to your cam-paign. See [32] Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 7221) in paragraph at lines 1948--1948 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [ ][]float[][] Underfull \hbox (badness 7595) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (92.50304pt too wide) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1948--1948 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 7869) in paragraph at lines 1949--1952 \T1/ptm/m/n/10 Add an fMDA (fo-cal mass drug ad-min-is-tra-tion) drug in-ter-ve n-tion to your cam-paign. See Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 6141) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (75.71327pt too wide) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Overfull \hbox (9.55446pt too wide) in paragraph at lines 1963--1963 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (104.50304pt too wide) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1963--1963 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- [33] Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (69.71327pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 7613) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_covera ge: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS-TANCE_ONLY\ TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 node_ids: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (98.50304pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1993--1993 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ev ent_trigger: [34] Underfull \hbox (badness 5756) in paragraph at lines 2025--2025 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 daily_eir: [][]list[][] Underfull \hbox (badness 5091) in paragraph at lines 2059--2059 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][]l ist[][] = None\T1/ptm/m/n/10 , [35] Underfull \hbox (badness 10000) in paragraph at lines 2099--2099 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2099--2099 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , [36] Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Overfull \hbox (11.51352pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (38.20403pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 killing_box_duration_days: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (98.1333pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 killing_exponential_decay_constant_days: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 int[][] = 90\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (13.73363pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 pelling_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (40.42413pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 pelling_box_duration_days: Underfull \hbox (badness 10000) in paragraph at lines 2172--2172 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (100.35341pt too wide) in paragraph at lines 2172--2172 \T1/ptm/m/it/10 pelling_exponential_decay_constant_days: [37] Underfull \hbox (badness 10000) in paragraph at lines 2232--2232 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n /10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 []\T1/ptm/m/it/10 schema_path_container\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 re-leased_number: Underfull \hbox (badness 5954) in paragraph at lines 2284--2284 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 leased_fraction: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 leased_infectious: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 leased_species: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 \T1/ptm/m/it/10 re-leased_genome: Underfull \hbox (badness 10000) in paragraph at lines 2284--2284 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , [38] Underfull \hbox (badness 10000) in paragraph at lines 2304--2306 []\T1/pcr/b/n/10 released_infectious \T1/ptm/m/n/10 ^^U The frac-tion of vec-to rs re-leased that Underfull \hbox (badness 10000) in paragraph at lines 2304--2306 \T1/ptm/m/n/10 are to be in-fec-tious. One can only use this fea-ture when Overfull \hbox (16.27205pt too wide) in paragraph at lines 2304--2306 \T1/ptm/m/n/10 `Malaria_Model'!='MALARIA_MECHANISTIC_MODEL_WITH_PARASITE_GENETI CS' Underfull \hbox (badness 10000) in paragraph at lines 2330--2330 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (16.35448pt too wide) in paragraph at lines 2330--2330 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2330--2330 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 2330--2330 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2330--2330 \T1/ptm/m/it/10 file- Overfull \hbox (2.35487pt too wide) in paragraph at lines 2330--2330 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [39] Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Overfull \hbox (2.73457pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (14.36418pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (52.97314pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (32.53346pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (39.19351pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 5359) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ig- Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 [][]\T1/ptm/m/it/10 bool[][] = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (16.02399pt too wide) in paragraph at lines 2356--2356 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5893) in paragraph at lines 2380--2382 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [40] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2435--2435 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 de-mo- Overfull \hbox (38.73457pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 float[][] = Overfull \hbox (50.36418pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (2.6847pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 tions: Overfull \hbox (88.97314pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , Overfull \hbox (68.53346pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (75.19351pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 tar- Overfull \hbox (17.93463pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Overfull \hbox (19.59468pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (11.3646pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 str[][] = Overfull \hbox (26.75435pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (52.02399pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5077) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = - Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cre- Overfull \hbox (90.54375pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 ate_nucleotide_sequence_from: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BAR- Overfull \hbox (33.99452pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 CODE_STRING\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 bar- Overfull \hbox (13.79442pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 code_string: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (52.88371pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 drug_resistant_string: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (43.23422pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 msp_variant_value: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (64.34395pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 pfemp1_variants_values: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 bar- Overfull \hbox (155.51305pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 code_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (194.60234pt too wide) in paragraph at lines 2435--2435 \T1/ptm/m/it/10 drug_resistant_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 2435--2435 [][]\T1/ptm/m/it/10 list[][] = [41] Overfull \vbox (135.66997pt too high) has occurred while \output is active [42] Underfull \hbox (badness 5893) in paragraph at lines 2462--2464 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [43] Overfull \hbox (11.18481pt too wide) in paragraph at lines 2551--2551 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 de-mo- Overfull \hbox (44.73457pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 float[][] Underfull \hbox (badness 8151) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tar- Overfull \hbox (56.36418pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tions: Overfull \hbox (94.97314pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.19351pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tar- Overfull \hbox (23.93463pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (25.59468pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tar- Overfull \hbox (17.3646pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 ig- Overfull \hbox (32.75435pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (58.02399pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Overfull \hbox (10.34447pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 irbc_type: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 mi- Overfull \hbox (42.5643pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 nor_epitope_type: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (10.3446pt too wide) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 msp_type: Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 [][]\T1/ptm/m/it/10 int[][] = [44] Overfull \vbox (3.66997pt too high) has occurred while \output is active [45] Underfull \hbox (badness 5893) in paragraph at lines 2578--2580 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e- Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (22.97314pt too wide) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (2.53346pt too wide) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (9.19351pt too wide) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2636--2636 \T1/ptm/m/it/10 get_age_min: [][]int[][] = [46] Underfull \hbox (badness 5893) in paragraph at lines 2662--2664 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [47] Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 \T1/ptm/m/it/10 cide_name: Overfull \hbox (29.51352pt too wide) in paragraph at lines 2703--2703 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (32.87419pt too wide) in paragraph at lines 2703--2703 \T1/ptm/m/it/10 killing_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (74.87367pt too wide) in paragraph at lines 2703--2703 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2703--2703 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2745--2745 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spray_coverage: [48] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2770--2770 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2770--2770 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2770--2770 \T1/ptm/m/it/10 file- Underfull \hbox (badness 10000) in paragraph at lines 2770--2770 \T1/ptm/m/it/10 name: Underfull \hbox (badness 10000) in paragraph at lines 2770--2770 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 6893) in paragraph at lines 2787--2787 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[] [] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2831--2831 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , [49] Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 tar-gets: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 drug: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.88365pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 6204) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du- Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 ra-tion: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 broad- Overfull \hbox (41.29442pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 cast_event_name: Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2851--2851 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Overfull \hbox (48.38399pt too wide) in paragraph at lines 2851--2851 \T1/ptm/m/it/10 ceived_Treatment\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 2867--2871 []\T1/pcr/b/n/10 of individuals to target with the intervention. Default is Underfull \hbox (badness 10000) in paragraph at lines 2867--2871 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 properties\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 [ { "trigger":"NewClinicalCase","coverage":0. Underfull \hbox (badness 10000) in paragraph at lines 2867--2871 \T1/pcr/m/n/10 8,"agemin":15,"agemax":70, "seek":0.4,"rate":0.3}, Underfull \hbox (badness 10000) in paragraph at lines 2867--2871 \T1/pcr/m/n/10 {"trigger":"NewSevereCase","coverage":0.8,"seek":0.6, Underfull \hbox (badness 10000) in paragraph at lines 2885--2886 []\T1/pcr/b/n/10 must have to receive the intervention. For example, Underfull \hbox (badness 10000) in paragraph at lines 2885--2886 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 individuals\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 ["IndividualProperty1:PropertyValue1", [50] Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis- Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 \T1/ptm/m/it/10 0.0013698630136986301\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_e ff: Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 \T1/ptm/m/it/10 0.0006849315068493151\T1/ptm/m/n/10 , \T1/ptm/m/it/10 iv_name: Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Us-ageDe-pen-de ntBed-net\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2915--2915 \T1/ptm/m/it/10 sonal_dependence: [][]dict[][] = None\T1/ptm/m/n/10 , [51] [52] Underfull \hbox (badness 10000) in paragraph at lines 3114--3114 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3114--3114 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [53] Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep- Underfull \hbox (badness 7273) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 e-ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (34.97314pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (14.53346pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (21.19351pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 7667) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 broad- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 cast_event: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac-cine_type: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ac-qui-si-tion- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 Block-ing\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac - Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 vac-cine_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac- Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 cine_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac- Overfull \hbox (29.97394pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 cine_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 3125--3125 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ef-fi- Overfull \hbox (2.56361pt too wide) in paragraph at lines 3125--3125 \T1/ptm/m/it/10 cacy_is_multiplicative: [54] Underfull \hbox (badness 5893) in paragraph at lines 3151--3153 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 3213--3213 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3213--3213 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [55] Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 clude_vector_state: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 ify_by: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 GENOME\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 com- Overfull \hbox (9.02399pt too wide) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 bine_similar_genomes: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spe- Overfull \hbox (102.76315pt too wide) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 cific_genome_combinations_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Overfull \hbox (64.54318pt too wide) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 lele_combinations_for_stratification: Overfull \hbox (2.32376pt too wide) in paragraph at lines 3248--3248 \T1/ptm/m/it/10 les_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 3248--3248 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [56] Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 6893) in paragraph at lines 3347--3347 \T1/ptm/m/it/10 = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 \T1/ptm/m/it/10 ual_property_filter: Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 in-fec- Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 \T1/ptm/m/it/10 tious-ness_bins: Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (4.30418pt too wide) in paragraph at lines 3347--3347 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 7291) in paragraph at lines 3347--3347 [][]\T1/ptm/m/it/10 int[][] = 100\T1/ptm/m/n/10 , \T1/ptm/m/it/10 par-a- Underfull \hbox (badness 10000) in paragraph at lines 3347--3347 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [57] Underfull \hbox (badness 10000) in paragraph at lines 3408--3408 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i- Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 nodes: Overfull \hbox (3.20416pt too wide) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 pretty_format: Overfull \hbox (15.2441pt too wide) in paragraph at lines 3424--3424 \T1/ptm/m/it/10 port_description: [58] Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re-port-Malar- Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 i-aFil-tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 min_age_years: Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 max_age_years: Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 [][]\T1/ptm/m/it/10 float[][] = 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 has_interventions: Overfull \hbox (74.41385pt too wide) in paragraph at lines 3464--3464 \T1/ptm/m/it/10 clude_30day_avg_infection_duration: [59] Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 start_day: Overfull \hbox (6.45485pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 re-port- Overfull \hbox (21.46431pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 re- Overfull \hbox (28.1245pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 port_filename: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Spa- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 tial-Re- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 port- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 Malar- Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 i-aFil- Overfull \hbox (13.23434pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 spa- Overfull \hbox (56.87419pt too wide) in paragraph at lines 3514--3514 \T1/ptm/m/it/10 tial_output_channels: Underfull \hbox (badness 10000) in paragraph at lines 3514--3514 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 ^^PBlood_Smear_Gametocyte_Prevalence^^Q, ^^PBlood_Smear_Parasite _Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 ^^PCam-paign_Cost^^Q, ^^PDaily_Bites_Per_Human^^Q, ^^PDaily_EIR^ ^Q, ^^PDis-ease_Deaths^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 ^^PNew_Reported_Infections^^Q, ^^PNew_Severe_Cases^^Q, ^^PPCR_Ga metocyte_Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 ^^PPCR_Parasite_Prevalence^^Q, ^^PPfHRP2_Prevalence^^Q, ^^PPop-u -la-tion^^Q, ^^PPreva- Underfull \hbox (badness 10000) in paragraph at lines 3542--3550 \T1/ptm/m/n/10 lence^^Q, ^^PRain-fall^^Q, ^^PRel-a-tive_Humidity^^Q, ^^PTrue_Pr evalence^^Q De-faults: [60] Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 6893) in paragraph at lines 3563--3563 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3563--3563 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3584--3584 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 3584--3584 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- Underfull \hbox (badness 10000) in paragraph at lines 3584--3584 \T1/ptm/m/it/10 clude_infection_table: Underfull \hbox (badness 10000) in paragraph at lines 3584--3584 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- [61] Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 re-port-ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Overfull \hbox (10.30418pt too wide) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3646--3646 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 port-ing_interval: Overfull \hbox (10.30418pt too wide) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (20.78384pt too wide) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3696--3696 \T1/ptm/m/it/10 port_description: [62] [63] Underfull \hbox (badness 10000) in paragraph at lines 3801--3801 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3801--3801 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (26.78384pt too wide) in paragraph at lines 3801--3801 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 6526) in paragraph at lines 3801--3801 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3801--3801 \T1/ptm/m/it/10 ify_by_gender: Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (14.48471pt too wide) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 in-di- Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 vid- Overfull \hbox (74.78384pt too wide) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 [][]\T1/ptm/m/it/10 str[][] Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 strat- Overfull \hbox (35.68442pt too wide) in paragraph at lines 3835--3835 \T1/ptm/m/it/10 ify_by_gender: [64] Overfull \hbox (47.85474pt too wide) in paragraph at lines 3869--3869 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (49.79494pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 man- Overfull \hbox (35.35486pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 i- Overfull \hbox (45.63463pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (46.26491pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 bar- Overfull \hbox (55.34474pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 codes: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (122.7736pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 drug_resistant_strings: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (148.3231pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 drug_resistant_statistic_type: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (240.52356pt too wide) in paragraph at lines 3869--3869 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 NUM_PEOPLE_WITH_RESISTANT_INFECTION\TS1/ptm/m /it/10 '\T1/ptm/m/n/10 , Overfull \hbox (68.48471pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 age_bins: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (40.35486pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 in- Overfull \hbox (40.35486pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 di- Overfull \hbox (44.7948pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 vid- Overfull \hbox (128.78384pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 ual_property_to_collect: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (36.0248pt too wide) in paragraph at lines 3869--3869 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Overfull \hbox (50.76463pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 strat- Overfull \hbox (89.68442pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 ify_by_gender: Overfull \hbox (39.8048pt too wide) in paragraph at lines 3869--3869 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 = Overfull \hbox (40.24501pt too wide) in paragraph at lines 3869--3869 \T1/ptm/m/it/10 1\T1/pcr/m/n/10 ) [65] Underfull \hbox (badness 10000) in paragraph at lines 3920--3920 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Overfull \hbox (17.85474pt too wide) in paragraph at lines 3949--3949 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (19.79494pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 man- Overfull \hbox (5.35486pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 i- Overfull \hbox (15.63463pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (48.68404pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 species_list: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (22.85487pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (20.76463pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 strat- Overfull \hbox (60.89413pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 ify_by_species: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 in- Overfull \hbox (70.75449pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 clude_wolbachia: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 in- Overfull \hbox (65.80426pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 clude_gestation: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (16.26491pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 bar- Overfull \hbox (25.34474pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 codes: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3949--3949 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 = Overfull \hbox (26.35487pt too wide) in paragraph at lines 3949--3949 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [66] Underfull \hbox (badness 10000) in paragraph at lines 3989--3989 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 event_list\T1/ptm/m/n/10 , Overfull \hbox (6.34352pt too wide) in paragraph at lines 3989--3989 \T1/ptm/m/it/10 only_include_events_in_list=True\T1/ptm/m/n/10 , [67] Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 36500000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 re- Overfull \hbox (15.2441pt too wide) in paragraph at lines 4017--4017 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 4017--4017 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4052--4052 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4052--4052 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 4052--4052 \T1/ptm/m/it/10 En-abled: bool = [68] Underfull \hbox (badness 10000) in paragraph at lines 4100--4100 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4100--4100 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 4100--4100 \T1/ptm/m/it/10 En-abled: bool = Underfull \hbox (badness 10000) in paragraph at lines 4124--4124 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4124--4124 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4124--4124 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 4124--4124 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (55.2345pt too wide) in paragraph at lines 4149--4149 []\T1/ptm/m/it/10 class_name: Overfull \hbox (15.80469pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 str Overfull \hbox (11.99501pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 = Overfull \hbox (28.85487pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (18.57497pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 pa- Overfull \hbox (24.53493pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 ram- Overfull \hbox (13.01491pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 e- Overfull \hbox (23.4746pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 ters: Overfull \hbox (20.24474pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 dict Overfull \hbox (11.99501pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 = Overfull \hbox (27.5448pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (19.68495pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 En- Overfull \hbox (30.7948pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 abled: Overfull \hbox (23.0249pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 = Overfull \hbox (26.08485pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (66.5943pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (23.0249pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 = Overfull \hbox (29.58485pt too wide) in paragraph at lines 4149--4149 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) [69] Underfull \hbox (badness 5832) in paragraph at lines 4152--4157 \T1/ptm/m/n/10 The re-port can only be used when the sim-u-la-tion setup pa-ram -e-ter \T1/ptm/b/n/10 Malaria_Model \T1/ptm/m/n/10 is set to Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 4198--4198 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 bool = [70] Underfull \hbox (badness 10000) in paragraph at lines 4223--4223 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 4223--4223 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 6236) in paragraph at lines 4271--4271 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 4271--4271 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4271--4271 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , [71] Underfull \hbox (badness 10000) in paragraph at lines 4295--4295 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4295--4295 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4295--4295 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4295--4295 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4295--4295 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4324--4324 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4324--4324 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4324--4324 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4324--4324 \T1/ptm/m/it/10 En-abled: Overfull \hbox (6.5943pt too wide) in paragraph at lines 4324--4324 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 4368--4368 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4368--4368 \T1/ptm/m/it/10 bool = [72] Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 str = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 bool = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4392--4392 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (19.2345pt too wide) in paragraph at lines 4415--4415 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 e-ters: Underfull \hbox (badness 8151) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 dict = Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 abled: Underfull \hbox (badness 10000) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (30.5943pt too wide) in paragraph at lines 4415--4415 \T1/ptm/m/it/10 Pretty_Format: [73] Overfull \hbox (67.2345pt too wide) in paragraph at lines 4443--4443 []\T1/ptm/m/it/10 class_name: Overfull \hbox (27.80469pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 str Overfull \hbox (23.99501pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 = Overfull \hbox (40.85487pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (30.57497pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 pa- Overfull \hbox (36.53493pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 ram- Overfull \hbox (25.01491pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 e- Overfull \hbox (35.4746pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 ters: Overfull \hbox (32.24474pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 dict Overfull \hbox (23.99501pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 = Overfull \hbox (39.5448pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (31.68495pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 En- Overfull \hbox (42.7948pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 abled: Overfull \hbox (35.0249pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 = Overfull \hbox (38.08485pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (78.5943pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (35.0249pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 = Overfull \hbox (41.58485pt too wide) in paragraph at lines 4443--4443 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 4471--4471 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4471--4471 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4471--4471 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4471--4471 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4471--4471 \T1/ptm/m/it/10 Pretty_Format: [74] Overfull \hbox (37.2345pt too wide) in paragraph at lines 4495--4495 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 str Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 = Overfull \hbox (10.85487pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (0.57497pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 pa- Overfull \hbox (6.53493pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 ram- Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 e- Overfull \hbox (5.4746pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 ters: Overfull \hbox (2.24474pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 dict Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 = Overfull \hbox (9.5448pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (1.68495pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 En- Overfull \hbox (12.7948pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 abled: Overfull \hbox (5.0249pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 = Overfull \hbox (8.08485pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (48.5943pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (5.0249pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 = Overfull \hbox (11.58485pt too wide) in paragraph at lines 4495--4495 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 4520--4520 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4520--4520 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4520--4520 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 4520--4520 \T1/ptm/m/it/10 Pretty_Format: [75] Underfull \hbox (badness 10000) in paragraph at lines 4577--4577 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , Overfull \hbox (24.52415pt too wide) in paragraph at lines 4577--4577 \T1/ptm/m/it/10 var_gene_randomness_type: Underfull \hbox (badness 10000) in paragraph at lines 4577--4577 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 4578--4580 \T1/ptm/m/n/10 Sets up the de-fault pa-ram-e-ters for par-a-site ge-net-ics sim -u-la-tions Malaria_Model = [76] Underfull \hbox (badness 10000) in paragraph at lines 4718--4718 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 species_name: Underfull \hbox (badness 10000) in paragraph at lines 4718--4718 [][]\T1/ptm/m/it/10 str[][]\T1/ptm/m/n/10 , \T1/ptm/m/it/10 habi-tat_type: [][] str[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7631) in paragraph at lines 4719--4722 \T1/ptm/m/n/10 Set the Max_Larval_Capacity for a given species and habi-tat. Ef -fec-tively do-ing some-thing [77] [78] [79] Underfull \hbox (badness 10000) in paragraph at lines 5056--5056 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , \T1/ptm/m/it/10 in-sec- Underfull \hbox (badness 6675) in paragraph at lines 5056--5056 \T1/ptm/m/it/10 ti-cide_name: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 5939) in paragraph at lines 5056--5056 \T1/ptm/m/it/10 species: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 al- Underfull \hbox (badness 6047) in paragraph at lines 5056--5056 \T1/ptm/m/it/10 block-ing: [][]float[][] = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5056--5056 \T1/ptm/m/it/10 pelling: [][]float[][] = 1.0\T1/ptm/m/n/10 , [80] Underfull \hbox (badness 10000) in paragraph at lines 5126--5126 \T1/ptm/m/it/10 driver_type: [][]str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 CL AS-SIC\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5126--5126 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 shred-ding_allele_required : Underfull \hbox (badness 10000) in paragraph at lines 5126--5126 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al-lele_shredding_fraction : Underfull \hbox (badness 10000) in paragraph at lines 5126--5126 [][]\T1/ptm/m/it/10 float[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Underfull \hbox (badness 10000) in paragraph at lines 5126--5126 \T1/ptm/m/it/10 lele_to_shred_to_surviving_fraction: [81] [82] Underfull \hbox (badness 10000) in paragraph at lines 5258--5258 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 species_name\T1/ptm/m/ n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5258--5258 \T1/ptm/m/it/10 habi-tat_type\T1/ptm/m/n/10 , Underfull \hbox (badness 7631) in paragraph at lines 5259--5262 \T1/ptm/m/n/10 Set the Max_Larval_Capacity for a given species and habi-tat. Ef -fec-tively do-ing some-thing [83] [84] Overfull \hbox (54.6225pt too wide) in paragraph at lines 5293--5294 []\T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 , Overfull \hbox (84.6225pt too wide) in paragraph at lines 5297--5298 []\T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/m/ n/10 , Overfull \hbox (12.6225pt too wide) in paragraph at lines 5298--5299 []\T1/pcr/m/n/10 emodpy_malaria.interventions.diag_survey\T1/ptm/m/n/10 , Overfull \hbox (24.6225pt too wide) in paragraph at lines 5300--5301 []\T1/pcr/m/n/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5301--5302 []\T1/pcr/m/n/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 , Overfull \hbox (6.6225pt too wide) in paragraph at lines 5303--5304 []\T1/pcr/m/n/10 emodpy_malaria.interventions.ivermectin\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 5304--5305 []\T1/pcr/m/n/10 emodpy_malaria.interventions.mosquitorelease\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5305--5306 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 5306--5307 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outdoorrestkill\T1/ptm/m/n/10 , Overfull \hbox (24.6225pt too wide) in paragraph at lines 5307--5308 []\T1/pcr/m/n/10 emodpy_malaria.interventions.spacespraying\T1/ptm/m/n/10 , Overfull \hbox (0.6225pt too wide) in paragraph at lines 5308--5309 []\T1/pcr/m/n/10 emodpy_malaria.interventions.sugartrap\T1/ptm/m/n/10 , Overfull \hbox (48.6225pt too wide) in paragraph at lines 5309--5310 []\T1/pcr/m/n/10 emodpy_malaria.interventions.treatment_seeking\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5310--5311 []\T1/pcr/m/n/10 emodpy_malaria.interventions.udbednet\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5311--5312 []\T1/pcr/m/n/10 emodpy_malaria.interventions.vaccine\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 5313--5314 []\T1/pcr/m/n/10 emodpy_malaria.malaria_vector_species_params\T1/ptm/m/n/10 , [85] (./institute-for-disease-modeling-emodpy-malaria.ind [86] Underfull \hbox (badness 10000) in paragraph at lines 8--10 []\T1/pcr/m/n/10 add_campaign_event() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 8--10 \T1/ptm/m/it/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Overfull \hbox (48.28003pt too wide) in paragraph at lines 10--12 \T1/ptm/m/it/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/m/n /10 ), Underfull \hbox (badness 10000) in paragraph at lines 12--14 []\T1/pcr/m/n/10 add_diagnostic_survey() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Underfull \hbox (badness 10000) in paragraph at lines 12--14 \T1/ptm/m/it/10 emodpy_malaria.interventions.diag_survey\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 14--16 []\T1/pcr/m/n/10 add_drug_campaign() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 14--16 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 16--18 []\T1/pcr/m/n/10 add_drug_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 18--20 []\T1/pcr/m/n/10 add_drug_status_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Underfull \hbox (badness 10000) in paragraph at lines 20--22 []\T1/pcr/m/n/10 add_event_recorder() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/pcr/m/n/10 add_fMDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 22--24 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 24--26 []\T1/pcr/m/n/10 add_genes_and_alleles() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Underfull \hbox (badness 10000) in paragraph at lines 28--30 []\T1/pcr/m/n/10 add_InputEIR() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 28--30 \T1/ptm/m/it/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 30--32 []\T1/pcr/m/n/10 add_insecticide_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 32--34 []\T1/pcr/m/n/10 add_insecticide_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 36--38 []\T1/pcr/m/n/10 add_ITN() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 38--40 []\T1/pcr/m/n/10 add_ITN_scheduled() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 40--42 []\T1/pcr/m/n/10 add_ITN_triggered() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 42--44 []\T1/pcr/m/n/10 add_larval_habitat_multiplier() Overfull \hbox (127.95007pt too wide) in paragraph at lines 42--44 \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics .MalariaDemographics Underfull \hbox (badness 10000) in paragraph at lines 46--48 []\T1/pcr/m/n/10 add_malaria_patient_json_report() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 48--50 []\T1/pcr/m/n/10 add_malaria_sql_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Underfull \hbox (badness 10000) in paragraph at lines 50--52 []\T1/pcr/m/n/10 add_malaria_summary_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 54--56 []\T1/pcr/m/n/10 add_malaria_transmission_report() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 56--58 []\T1/pcr/m/n/10 add_MDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 56--58 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 58--60 []\T1/pcr/m/n/10 add_MSAT() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 58--60 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 60--62 []\T1/pcr/m/n/10 add_mutation() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 62--64 []\T1/pcr/m/n/10 add_outbreak_individual() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in m od-ule Underfull \hbox (badness 10000) in paragraph at lines 62--64 \T1/ptm/m/it/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 64--66 \T1/ptm/m/it/10 ule emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 66--68 \T1/ptm/m/it/10 ule emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 68--70 []\T1/pcr/m/n/10 add_OutdoorRestKill() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 70--72 []\T1/pcr/m/n/10 add_report_event_counter() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 72--74 []\T1/pcr/m/n/10 add_report_intervention_pop_avg() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/pcr/m/n/10 add_report_node_demographics_malaria() [87] Overfull \hbox (52.1225pt too wide) in paragraph at lines 80--82 []\T1/pcr/m/n/10 add_report_node_demographics_malaria_genetics() Underfull \hbox (badness 10000) in paragraph at lines 82--84 []\T1/pcr/m/n/10 add_report_vector_genetics() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 86--88 []\T1/pcr/m/n/10 add_report_vector_stats() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in m od-ule Overfull \hbox (22.1225pt too wide) in paragraph at lines 88--90 []\T1/pcr/m/n/10 add_report_vector_stats_malaria_genetics() Underfull \hbox (badness 10000) in paragraph at lines 90--92 []\T1/pcr/m/n/10 add_rfMDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 90--92 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 92--94 []\T1/pcr/m/n/10 add_rfMSAT() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 92--94 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 94--96 []\T1/pcr/m/n/10 add_scheduled_vaccine() 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(badness 10000) in paragraph at lines 120--122 []\T1/pcr/m/n/10 BednetIntervention() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Overfull \hbox (59.0599pt too wide) in paragraph at lines 125--127 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaImmunityReport Overfull \hbox (72.70978pt too wide) in paragraph at lines 127--129 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaPatientJSONReport Overfull \hbox (34.07018pt too wide) in paragraph at lines 129--131 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSqlReport Overfull \hbox (59.06006pt too wide) in paragraph at lines 131--133 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSummaryReport Overfull \hbox (79.58981pt too wide) in paragraph at lines 133--135 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report 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at lines 145--147 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographics Overfull \hbox (101.02975pt too wide) in paragraph at lines 147--149 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographicsMalaria Overfull \hbox (136.01923pt too wide) in paragraph at lines 149--151 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographicsMalariaGenetics Overfull \hbox (125.03925pt too wide) in paragraph at lines 151--153 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportSimpleMalariaTransmissionJSON Overfull \hbox (49.04977pt too wide) in paragraph at lines 153--155 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportVectorGenetics Overfull \hbox (54.46992pt too wide) in paragraph at lines 155--157 []\T1/pcr/m/n/10 config() 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(4.27083pt too wide) in paragraph at lines 168--170 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Overfull \hbox (52.1225pt too wide) in paragraph at lines 177--178 []\T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics [88] Overfull \hbox (82.1225pt too wide) in paragraph at lines 185--186 []\T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker Overfull \hbox (10.1225pt too wide) in paragraph at lines 187--188 []\T1/pcr/m/n/10 emodpy_malaria.interventions.diag_survey Overfull \hbox (22.1225pt too wide) in paragraph at lines 191--192 []\T1/pcr/m/n/10 emodpy_malaria.interventions.drug_campaign Overfull \hbox (4.1225pt too wide) in paragraph at lines 197--198 []\T1/pcr/m/n/10 emodpy_malaria.interventions.ivermectin Overfull \hbox (34.1225pt too wide) in paragraph at lines 199--200 []\T1/pcr/m/n/10 emodpy_malaria.interventions.mosquitorelease Overfull \hbox (34.1225pt too wide) in paragraph at lines 203--204 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outdoorrestkill Overfull \hbox (22.1225pt too wide) in paragraph at lines 205--206 []\T1/pcr/m/n/10 emodpy_malaria.interventions.spacespraying Overfull \hbox (46.1225pt too wide) in paragraph at lines 209--210 []\T1/pcr/m/n/10 emodpy_malaria.interventions.treatment_seeking Overfull \hbox (34.1225pt too wide) in paragraph at lines 217--218 []\T1/pcr/m/n/10 emodpy_malaria.malaria_vector_species_params Underfull \hbox (badness 10000) in paragraph at lines 228--230 []\T1/pcr/m/n/10 fmda_cfg() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 228--230 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 230--232 []\T1/pcr/m/n/10 from_csv() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (36.54083pt too wide) in paragraph at lines 230--232 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 232--234 []\T1/pcr/m/n/10 from_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (36.54083pt too wide) in paragraph at lines 232--234 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 234--236 []\T1/pcr/m/n/10 from_pop_csv() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (36.54083pt too wide) in paragraph at lines 234--236 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 236--238 []\T1/pcr/m/n/10 from_template_node() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Overfull \hbox (36.54083pt too wide) in paragraph at lines 236--238 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 241--243 []\T1/pcr/m/n/10 get_drug_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 243--245 []\T1/pcr/m/n/10 get_file_from_http() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 245--247 []\T1/pcr/m/n/10 get_species_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 247--249 []\T1/pcr/m/n/10 get_species_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 252--254 []\T1/pcr/m/n/10 InputEIR() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 252--254 \T1/ptm/m/it/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 254--256 []\T1/pcr/m/n/10 Ivermectin() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 254--256 \T1/ptm/m/it/10 emodpy_malaria.interventions.ivermectin\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 259--261 []\T1/pcr/m/n/10 MalariaDemographics \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Overfull \hbox (36.54083pt too wide) in paragraph at lines 259--261 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 261--263 []\T1/pcr/m/n/10 MalariaDiagnostic() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 261--263 \T1/ptm/m/it/10 emodpy_malaria.interventions.common\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 263--265 []\T1/pcr/m/n/10 MalariaImmunityReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 265--267 []\T1/pcr/m/n/10 MalariaPatientJSONReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 267--269 []\T1/pcr/m/n/10 MalariaSqlReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 269--271 []\T1/pcr/m/n/10 MalariaSummaryReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 271--273 []\T1/pcr/m/n/10 MalariaSurveyJSONAnalyzer \T1/ptm/m/n/10 (\T1/ptm/m/it/10 clas s in Overfull \hbox (74.6225pt too wide) in paragraph at lines 276--277 []| \T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/1 0 , Overfull \hbox (2.6225pt too wide) in paragraph at lines 278--279 []| \T1/pcr/m/n/10 emodpy_malaria.interventions.bednet\T1/ptm/m/n/10 , Overfull \hbox (2.6225pt too wide) in paragraph at lines 279--280 []| \T1/pcr/m/n/10 emodpy_malaria.interventions.common\T1/ptm/m/n/10 , [89] Overfull \hbox (104.6225pt too wide) in paragraph at lines 280--281 []| \T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/ m/n/10 , Overfull \hbox (32.6225pt too wide) in paragraph at lines 281--282 []| \T1/pcr/m/n/10 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[]\T1/pcr/m/n/10 set_team_defaults() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 420--422 []\T1/pcr/m/n/10 set_team_drug_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod- ule Underfull \hbox (badness 10000) in paragraph at lines 422--424 []\T1/pcr/m/n/10 SpaceSpraying() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 422--424 \T1/ptm/m/it/10 emodpy_malaria.interventions.spacespraying\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 424--426 []\T1/pcr/m/n/10 SpatialReportMalariaFiltered \T1/ptm/m/n/10 (\T1/ptm/m/it/10 c lass in Underfull \hbox (badness 10000) in paragraph at lines 426--428 []\T1/pcr/m/n/10 species_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (16.61057pt too wide) in paragraph at lines 426--428 \T1/ptm/m/it/10 emodpy_malaria.malaria_vector_species_params\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 428--430 []\T1/pcr/m/n/10 SugarTrap() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 428--430 \T1/ptm/m/it/10 emodpy_malaria.interventions.sugartrap\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 433--435 \T1/ptm/m/it/10 ule emodpy_malaria.interventions.common\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 438--440 []\T1/pcr/m/n/10 UDBednet() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 438--440 \T1/ptm/m/it/10 emodpy_malaria.interventions.udbednet\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 443--445 []\T1/pcr/m/n/10 VectorHabitatReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in [91]) (./institute-for-disease-modeling-emodpy-malaria.aux) ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on 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