Read the Docs build information Build id: 834799 Project: mdolab-openconcept Version: latest Commit: 697fb9cb9fbfeaecb9d1295e97172b7d3b7693a8 Date: 2022-01-26T16:46:38.644324Z State: finished Success: True [rtd-command-info] start-time: 2022-01-26T16:46:40.684007Z, end-time: 2022-01-26T16:46:41.451845Z, duration: 0, exit-code: 0 git clone --no-single-branch --depth 50 https://github.com/mdolab/openconcept.git . Cloning into '.'... [rtd-command-info] start-time: 2022-01-26T16:46:41.649524Z, end-time: 2022-01-26T16:46:41.746719Z, duration: 0, exit-code: 0 git checkout --force origin/master Note: checking out 'origin/master'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at 697fb9c Added reference to paper for OAS integration work (#33) [rtd-command-info] start-time: 2022-01-26T16:46:41.960868Z, end-time: 2022-01-26T16:46:42.029100Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2022-01-26T16:46:43.336588Z, end-time: 2022-01-26T16:46:59.951011Z, duration: 16, exit-code: 0 python3.6 -mvirtualenv --system-site-packages Using base prefix '/home/docs/.pyenv/versions/3.6.12' New python executable in /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openconcept/envs/latest/bin/python3.6 Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openconcept/envs/latest/bin/python Installing setuptools, pip, wheel... done. [rtd-command-info] start-time: 2022-01-26T16:47:00.126912Z, end-time: 2022-01-26T16:47:02.427147Z, duration: 2, exit-code: 0 python -m pip install --upgrade --no-cache-dir pip setuptools<58.3.0 Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openconcept/envs/latest/lib/python3.6/site-packages (21.3.1) Collecting setuptools<58.3.0 Downloading setuptools-58.2.0-py3-none-any.whl (946 kB) Installing collected packages: setuptools Attempting uninstall: setuptools Found existing installation: setuptools 59.6.0 Uninstalling setuptools-59.6.0: Successfully uninstalled setuptools-59.6.0 Successfully installed setuptools-58.2.0 [rtd-command-info] start-time: 2022-01-26T16:47:02.614078Z, end-time: 2022-01-26T16:47:12.750747Z, duration: 10, exit-code: 0 python -m pip install --upgrade --no-cache-dir -I mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx sphinx-rtd-theme readthedocs-sphinx-ext<2.2 setuptools<58.3.0 Collecting mock==1.0.1 Downloading mock-1.0.1.zip (861 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting pillow==5.4.1 Downloading Pillow-5.4.1-cp36-cp36m-manylinux1_x86_64.whl (2.0 MB) Collecting alabaster!=0.7.5,<0.8,>=0.7 Downloading alabaster-0.7.12-py2.py3-none-any.whl (14 kB) Collecting commonmark==0.8.1 Downloading commonmark-0.8.1-py2.py3-none-any.whl (47 kB) Collecting recommonmark==0.5.0 Downloading recommonmark-0.5.0-py2.py3-none-any.whl (9.8 kB) Collecting sphinx Downloading Sphinx-4.4.0-py3-none-any.whl (3.1 MB) Collecting sphinx-rtd-theme Downloading sphinx_rtd_theme-1.0.0-py2.py3-none-any.whl (2.8 MB) Collecting readthedocs-sphinx-ext<2.2 Downloading readthedocs_sphinx_ext-2.1.4-py2.py3-none-any.whl (29 kB) Collecting setuptools<58.3.0 Downloading setuptools-58.2.0-py3-none-any.whl (946 kB) Collecting future Downloading future-0.18.2.tar.gz (829 kB) Preparing metadata (setup.py): started 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Jinja2>=2.3 Downloading Jinja2-3.0.3-py3-none-any.whl (133 kB) Collecting packaging Downloading packaging-21.3-py3-none-any.whl (40 kB) Collecting sphinxcontrib-applehelp Downloading sphinxcontrib_applehelp-1.0.2-py2.py3-none-any.whl (121 kB) Collecting imagesize Downloading imagesize-1.3.0-py2.py3-none-any.whl (5.2 kB) Collecting importlib-metadata>=4.4 Downloading importlib_metadata-4.8.3-py3-none-any.whl (17 kB) Collecting sphinxcontrib-htmlhelp>=2.0.0 Downloading sphinxcontrib_htmlhelp-2.0.0-py2.py3-none-any.whl (100 kB) Collecting pytz>=2015.7 Downloading pytz-2021.3-py2.py3-none-any.whl (503 kB) Collecting typing-extensions>=3.6.4 Downloading typing_extensions-4.0.1-py3-none-any.whl (22 kB) Collecting zipp>=0.5 Downloading zipp-3.6.0-py3-none-any.whl (5.3 kB) Collecting MarkupSafe>=2.0 Downloading MarkupSafe-2.0.1-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (30 kB) Collecting certifi>=2017.4.17 Downloading certifi-2021.10.8-py2.py3-none-any.whl (149 kB) Collecting urllib3<1.27,>=1.21.1 Downloading urllib3-1.26.8-py2.py3-none-any.whl (138 kB) Collecting charset-normalizer~=2.0.0 Downloading charset_normalizer-2.0.10-py3-none-any.whl (39 kB) Collecting idna<4,>=2.5 Downloading idna-3.3-py3-none-any.whl (61 kB) Collecting pyparsing!=3.0.5,>=2.0.2 Downloading pyparsing-3.0.7-py3-none-any.whl (98 kB) Building wheels for collected packages: mock, future Building wheel for mock (setup.py): started Building wheel for mock (setup.py): finished with status 'done' Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23773 sha256=372136c4dfde70a3120a07bc584703b8a80ea92cdd69943bee691918f2a134d4 Stored in directory: /tmp/pip-ephem-wheel-cache-fp8ovtgv/wheels/98/4d/ec/1aa935d28cb63b7b16037fc990302a34244ac3b0601a4e0c00 Building wheel for future (setup.py): started Building wheel for future (setup.py): finished with status 'done' Created wheel for future: filename=future-0.18.2-py3-none-any.whl size=491070 sha256=7114cb02a3e6e410ce41b533d95e01efff7d5b60ee02b455f2c165248da0f69f Stored in directory: /tmp/pip-ephem-wheel-cache-fp8ovtgv/wheels/6e/9c/ed/4499c9865ac1002697793e0ae05ba6be33553d098f3347fb94 Successfully built mock future Installing collected packages: zipp, urllib3, typing-extensions, pytz, pyparsing, MarkupSafe, idna, charset-normalizer, certifi, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, snowballstemmer, requests, Pygments, packaging, Jinja2, importlib-metadata, imagesize, future, docutils, babel, alabaster, sphinx, commonmark, sphinx-rtd-theme, setuptools, recommonmark, readthedocs-sphinx-ext, pillow, mock ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. matplotlib 3.3.2 requires pillow>=6.2.0, but you have pillow 5.4.1 which is incompatible. Successfully installed Jinja2-3.0.3 MarkupSafe-2.0.1 Pygments-2.11.2 alabaster-0.7.12 babel-2.9.1 certifi-2021.10.8 charset-normalizer-2.0.10 commonmark-0.8.1 docutils-0.17.1 future-0.18.2 idna-3.3 imagesize-1.3.0 importlib-metadata-4.8.3 mock-1.0.1 packaging-21.3 pillow-5.4.1 pyparsing-3.0.7 pytz-2021.3 readthedocs-sphinx-ext-2.1.4 recommonmark-0.5.0 requests-2.27.1 setuptools-58.2.0 snowballstemmer-2.2.0 sphinx-4.4.0 sphinx-rtd-theme-1.0.0 sphinxcontrib-applehelp-1.0.2 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-htmlhelp-2.0.0 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-1.0.3 sphinxcontrib-serializinghtml-1.1.5 typing-extensions-4.0.1 urllib3-1.26.8 zipp-3.6.0 [rtd-command-info] start-time: 2022-01-26T16:47:12.960637Z, end-time: 2022-01-26T16:47:55.728219Z, duration: 42, exit-code: 0 python -m pip install --upgrade --upgrade-strategy eager --no-cache-dir .[testing] Processing /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openconcept/checkouts/latest Preparing metadata 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pyDOE2, sphinx-sitemap, testflo, contextvars Building wheel for openmdao (setup.py): started Building wheel for openmdao (setup.py): finished with status 'done' Created wheel for openmdao: filename=openmdao-3.15.0-py3-none-any.whl size=5636850 sha256=e51dc97a1833365e5dca1d5e427009a9b8a397d705c5637bddc2f956d9e960a2 Stored in directory: /tmp/pip-ephem-wheel-cache-a0ug_l8f/wheels/eb/c3/12/cec486b62c21605692c0ebf6ea679b827bb8030d6352ed7656 Building wheel for openconcept (setup.py): started Building wheel for openconcept (setup.py): finished with status 'done' Created wheel for openconcept: filename=openconcept-0.3.2-py3-none-any.whl size=126528 sha256=73f26721cfb0d89f35cde10bcd6aa5abae71463adb09432f8cf64d0d0c0ee403 Stored in directory: /tmp/pip-ephem-wheel-cache-a0ug_l8f/wheels/4c/ae/d5/b988542ec27627cec272bcc8ab1f4767da3c09b902db08b7e7 Building wheel for pyDOE2 (setup.py): started Building wheel for pyDOE2 (setup.py): finished with status 'done' Created wheel for pyDOE2: filename=pyDOE2-1.3.0-py3-none-any.whl size=25539 sha256=c0fd8c62550b4bb2e91e26965fb406522d02458d335072bc7d75f1193652e22a Stored in directory: /tmp/pip-ephem-wheel-cache-a0ug_l8f/wheels/25/87/a4/3e649e5d682f7a8637359651e4e099284d0719e6e3beebe99f Building wheel for sphinx-sitemap (setup.py): started Building wheel for sphinx-sitemap (setup.py): finished with status 'done' Created wheel for sphinx-sitemap: filename=sphinx_sitemap-2.2.0-py3-none-any.whl size=6064 sha256=c8aef760fd8058acbee25c31bb837ebe50d00ed82dd9e5b5459763ecedccc7f1 Stored in directory: /tmp/pip-ephem-wheel-cache-a0ug_l8f/wheels/4a/0f/35/8bd540aad7fa210467b174c2fc82d4d3411143cd34a77f28eb Building wheel for testflo (setup.py): started Building wheel for testflo (setup.py): finished with status 'done' Created wheel for testflo: filename=testflo-1.4.7-py3-none-any.whl size=25266 sha256=39473b76a466a2c6488e8f4805059b3a5444300f65a56acfb5e7e8b403d746c9 Stored in directory: /tmp/pip-ephem-wheel-cache-a0ug_l8f/wheels/50/93/89/1b40f4532f7a663332aacf92af10bba881ee56bc8028414c69 Building wheel for contextvars (setup.py): started Building wheel for contextvars (setup.py): finished with status 'done' Created wheel for contextvars: filename=contextvars-2.4-py3-none-any.whl size=7681 sha256=5acb1b890d70478b76d4ce43a4ffd639714f5f4f191abc593b235b52fee5e9cf Stored in directory: /tmp/pip-ephem-wheel-cache-a0ug_l8f/wheels/41/11/53/911724983aa48deb94792432e14e518447212dd6c5477d49d3 Successfully built openmdao openconcept pyDOE2 sphinx-sitemap testflo contextvars Installing collected packages: six, ipython-genutils, decorator, wcwidth, traitlets, setuptools, pyrsistent, pycparser, ptyprocess, parso, immutables, attrs, webencodings, tornado, pyzmq, python-dateutil, prompt-toolkit, pickleshare, pexpect, nest-asyncio, jupyter-core, jsonschema, jedi, entrypoints, contextvars, cffi, backcall, testpath, sniffio, pandocfilters, nbformat, mistune, jupyter-client, IPython, defusedxml, dataclasses, bleach, argon2-cffi-bindings, websocket-client, terminado, smmap, Send2Trash, prometheus-client, nbconvert, ipykernel, argon2-cffi, anyio, notebook, jupyter-server, gitdb, widgetsnbextension, soupsieve, pyyaml, mdit-py-plugins, markdown-it-py, latexcodec, jupyterlab-widgets, jupyter-server-mathjax, greenlet, GitPython, docutils, colorama, async-generator, sqlalchemy, Sphinx, pybtex, numpy, nbdime, nbclient, ipywidgets, beautifulsoup4, uc-micro-py, toml, sphinx-togglebutton, scipy, qtpy, pydata-sphinx-theme, pybtex-docutils, myst-parser, jupyter-sphinx, jupyter-cache, importlib-resources, click, appdirs, sphinxcontrib-bibtex, sphinx-thebe, sphinx-panels, sphinx-multitoc-numbering, sphinx-jupyterbook-latex, sphinx-external-toc, sphinx-copybutton, sphinx-comments, sphinx-book-theme, rply, qtconsole, pyDOE2, pillow, networkx, myst-nb, linkify-it-py, kiwisolver, jupytext, jupyter-console, cycler, coverage, testflo, tabulate, sphinx-sitemap, py, pluggy, openmdao, numpydoc, matplotlib, jupyter-book, jupyter, ipyparallel, iniconfig, baron, redbaron, pytest, openconcept Attempting uninstall: six Found existing installation: six 1.15.0 Not uninstalling six at /home/docs/.pyenv/versions/3.6.12/lib/python3.6/site-packages, outside environment /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openconcept/envs/latest Can't uninstall 'six'. No files were found to uninstall. Attempting uninstall: setuptools Found existing installation: setuptools 58.2.0 Uninstalling setuptools-58.2.0: Successfully uninstalled setuptools-58.2.0 Attempting uninstall: python-dateutil Found existing installation: python-dateutil 2.8.1 Not uninstalling python-dateutil at /home/docs/.pyenv/versions/3.6.12/lib/python3.6/site-packages, outside environment /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openconcept/envs/latest Can't uninstall 'python-dateutil'. No files were found to uninstall. Attempting uninstall: docutils Found existing installation: docutils 0.17.1 Uninstalling docutils-0.17.1: Successfully uninstalled docutils-0.17.1 Attempting uninstall: Sphinx Found existing installation: Sphinx 4.4.0 Uninstalling Sphinx-4.4.0: Successfully uninstalled Sphinx-4.4.0 Attempting uninstall: numpy Found existing installation: numpy 1.19.2 Not uninstalling numpy at /home/docs/.pyenv/versions/3.6.12/lib/python3.6/site-packages, outside environment /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openconcept/envs/latest Can't uninstall 'numpy'. No files were found to uninstall. Attempting uninstall: scipy Found existing installation: scipy 1.5.3 Not uninstalling scipy at /home/docs/.pyenv/versions/3.6.12/lib/python3.6/site-packages, outside environment /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openconcept/envs/latest Can't uninstall 'scipy'. No files were found to uninstall. Attempting uninstall: pillow Found existing installation: Pillow 5.4.1 Uninstalling Pillow-5.4.1: Successfully uninstalled Pillow-5.4.1 Attempting uninstall: kiwisolver Found existing installation: kiwisolver 1.2.0 Not uninstalling kiwisolver at /home/docs/.pyenv/versions/3.6.12/lib/python3.6/site-packages, outside environment /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openconcept/envs/latest Can't uninstall 'kiwisolver'. No files were found to uninstall. Attempting uninstall: cycler Found existing installation: cycler 0.10.0 Not uninstalling cycler at /home/docs/.pyenv/versions/3.6.12/lib/python3.6/site-packages, outside environment /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openconcept/envs/latest Can't uninstall 'cycler'. No files were found to uninstall. Attempting uninstall: matplotlib Found existing installation: matplotlib 3.3.2 Not uninstalling matplotlib at /home/docs/.pyenv/versions/3.6.12/lib/python3.6/site-packages, outside environment /home/docs/checkouts/readthedocs.org/user_builds/mdolab-openconcept/envs/latest Can't uninstall 'matplotlib'. No files were found to uninstall. Successfully installed GitPython-3.1.18 IPython-7.16.3 Send2Trash-1.8.0 Sphinx-3.5.4 anyio-3.5.0 appdirs-1.4.4 argon2-cffi-21.3.0 argon2-cffi-bindings-21.2.0 async-generator-1.10 attrs-20.3.0 backcall-0.2.0 baron-0.10.1 beautifulsoup4-4.10.0 bleach-4.1.0 cffi-1.15.0 click-7.1.2 colorama-0.4.4 contextvars-2.4 coverage-4.5.4 cycler-0.11.0 dataclasses-0.8 decorator-4.4.2 defusedxml-0.7.1 docutils-0.16 entrypoints-0.3 gitdb-4.0.9 greenlet-1.1.2 immutables-0.16 importlib-resources-3.0.0 iniconfig-1.1.1 ipykernel-5.5.6 ipyparallel-6.3.0 ipython-genutils-0.2.0 ipywidgets-7.6.5 jedi-0.17.2 jsonschema-3.2.0 jupyter-1.0.0 jupyter-book-0.11.3 jupyter-cache-0.4.3 jupyter-client-7.1.2 jupyter-console-6.4.0 jupyter-core-4.9.1 jupyter-server-1.13.1 jupyter-server-mathjax-0.2.3 jupyter-sphinx-0.3.1 jupyterlab-widgets-1.0.2 jupytext-1.10.3 kiwisolver-1.3.1 latexcodec-2.0.1 linkify-it-py-1.0.3 markdown-it-py-0.6.2 matplotlib-3.3.4 mdit-py-plugins-0.2.6 mistune-0.8.4 myst-nb-0.12.0 myst-parser-0.13.7 nbclient-0.5.9 nbconvert-5.6.1 nbdime-3.1.1 nbformat-5.1.3 nest-asyncio-1.5.4 networkx-2.5.1 notebook-6.4.8 numpy-1.19.5 numpydoc-1.1.0 openconcept-0.3.2 openmdao-3.15.0 pandocfilters-1.5.0 parso-0.7.1 pexpect-4.8.0 pickleshare-0.7.5 pillow-8.4.0 pluggy-1.0.0 prometheus-client-0.13.0 prompt-toolkit-3.0.24 ptyprocess-0.7.0 py-1.11.0 pyDOE2-1.3.0 pybtex-0.24.0 pybtex-docutils-1.0.1 pycparser-2.21 pydata-sphinx-theme-0.7.2 pyrsistent-0.18.0 pytest-6.2.5 python-dateutil-2.8.2 pyyaml-6.0 pyzmq-22.3.0 qtconsole-5.2.2 qtpy-2.0.0 redbaron-0.9.2 rply-0.7.8 scipy-1.5.4 setuptools-59.6.0 six-1.16.0 smmap-5.0.0 sniffio-1.2.0 soupsieve-2.3.1 sphinx-book-theme-0.1.10 sphinx-comments-0.0.3 sphinx-copybutton-0.4.0 sphinx-external-toc-0.2.3 sphinx-jupyterbook-latex-0.4.6 sphinx-multitoc-numbering-0.1.3 sphinx-panels-0.5.2 sphinx-sitemap-2.2.0 sphinx-thebe-0.0.10 sphinx-togglebutton-0.2.3 sphinxcontrib-bibtex-2.2.1 sqlalchemy-1.4.31 tabulate-0.8.9 terminado-0.12.1 testflo-1.4.7 testpath-0.5.0 toml-0.10.2 tornado-6.1 traitlets-4.3.3 uc-micro-py-1.0.1 wcwidth-0.2.5 webencodings-0.5.1 websocket-client-1.2.3 widgetsnbextension-3.5.2 [rtd-command-info] start-time: 2022-01-26T16:47:57.100152Z, end-time: 2022-01-26T16:47:57.171841Z, duration: 0, exit-code: 0 cat docs/conf.py # -*- coding: utf-8 -*- # # Configuration file for the Sphinx documentation builder. # # This file does only contain a selection of the most common options. For a # full list see the documentation: # http://www.sphinx-doc.org/en/master/config # -- Path setup -------------------------------------------------------------- # If extensions (or modules to document with autodoc) are in another directory, # add these directories to sys.path here. If the directory is relative to the # documentation root, use os.path.abspath to make it absolute, like shown here. # import os import sys import subprocess import openmdao import openconcept sys.path.insert(0, os.path.abspath('.')) sys.path.insert(0, os.path.abspath('..')) sys.path.insert(0, os.path.abspath('./_exts')) # sphinx build needs to be able to find the openmdao embed_code plugin # so we add it to the path this_directory = os.path.abspath(os.path.dirname(__file__)) # sys.path.insert(0, os.path.abspath(openconcept.__path__[0]+r'/docs/_exts')) def generate_src_docs(dir, top, packages): """ generate_src_docs is a modification of an OpenMDAO source doc generator the main difference is it doesn't include all the inherited public API elements """ index_top = """:orphan: .. _source_documentation: ******************** Source Docs ******************** .. toctree:: :titlesonly: :maxdepth: 1 """ package_top = """ .. toctree:: :maxdepth: 1 """ ref_sheet_bottom = """ :members: :special-members: __init__, __contains__, __iter__, __setitem__, __getitem__ :show-inheritance: .. toctree:: :maxdepth: 1 """ docs_dir = os.path.dirname(dir) doc_dir = os.path.join(docs_dir, "_srcdocs") if os.path.isdir(doc_dir): import shutil shutil.rmtree(doc_dir) if not os.path.isdir(doc_dir): os.mkdir(doc_dir) packages_dir = os.path.join(doc_dir, "packages") if not os.path.isdir(packages_dir): os.mkdir(packages_dir) # look for directories in the package level, one up from docs # auto-generate the top-level index.rst file for _srcdocs, based on # packages: # to improve the order that the user sees in the source docs, put # the important packages in this list explicitly. Any new ones that # get added will show up at the end. # begin writing the '_srcdocs/index.rst' file at mid level. index_filename = os.path.join(doc_dir, "index.rst") index = open(index_filename, "w") index.write(index_top) # auto-generate package header files (e.g. 'openconcept.analysis.rst') for package in packages: # a package is e.g. openmdao.core, that contains source files # a sub_package, is a src file, e.g. openmdao.core.component sub_packages = [] package_filename = os.path.join(packages_dir, "openconcept." + package + ".rst") package_name = "openconcept." + package # the sub_listing is going into each package dir and listing what's in it for sub_listing in sorted(os.listdir(os.path.join(top, package.replace('.','/')))): # don't want to catalog files twice, nor use init files nor test dir if (os.path.isdir(sub_listing) and sub_listing != "tests") or \ (sub_listing.endswith(".py") and not sub_listing.startswith('_')): # just want the name of e.g. dataxfer not dataxfer.py sub_packages.append(sub_listing.rsplit('.')[0]) if len(sub_packages) > 0: # continue to write in the top-level index file. # only document non-empty packages -- to avoid errors # (e.g. at time of writing, doegenerators, drivers, are empty dirs) # specifically don't use os.path.join here. Even windows wants the # stuff in the file to have fwd slashes. index.write(" packages/openconcept." + package + "\n") # make subpkg directory (e.g. _srcdocs/packages/core) for ref sheets package_dir = os.path.join(packages_dir, package) os.mkdir(package_dir) # create/write a package index file: (e.g. "_srcdocs/packages/openmdao.core.rst") package_file = open(package_filename, "w") package_file.write(package_name + "\n") package_file.write("-" * len(package_name) + "\n") package_file.write(package_top) for sub_package in sub_packages: SKIP_SUBPACKAGES = ['__pycache__'] # this line writes subpackage name e.g. "core/component.py" # into the corresponding package index file (e.g. "openmdao.core.rst") if sub_package not in SKIP_SUBPACKAGES: # specifically don't use os.path.join here. Even windows wants the # stuff in the file to have fwd slashes. package_file.write(" " + package + "/" + sub_package + "\n") # creates and writes out one reference sheet (e.g. core/component.rst) ref_sheet_filename = os.path.join(package_dir, sub_package + ".rst") ref_sheet = open(ref_sheet_filename, "w") # get the meat of the ref sheet code done filename = sub_package + ".py" ref_sheet.write(".. index:: " + filename + "\n\n") ref_sheet.write(".. _" + package_name + "." + filename + ":\n\n") ref_sheet.write(filename + "\n") ref_sheet.write("-" * len(filename) + "\n\n") ref_sheet.write(".. automodule:: " + package_name + "." + sub_package) # finish and close each reference sheet. ref_sheet.write(ref_sheet_bottom) ref_sheet.close() # finish and close each package file package_file.close() # finish and close top-level index file index.close() # Patch the Napoleon parser to find Inputs, Outputs, and Options headings in docstrings from sphinx.ext.napoleon.docstring import NumpyDocstring def parse_inputs_section(self, section): return self._format_fields('Inputs', self._consume_fields()) NumpyDocstring._parse_inputs_section = parse_inputs_section def parse_options_section(self, section): return self._format_fields('Options', self._consume_fields()) NumpyDocstring._parse_options_section = parse_options_section def parse_outputs_section(self, section): return self._format_fields('Outputs', self._consume_fields()) NumpyDocstring._parse_outputs_section = parse_outputs_section def patched_parse(self): self._sections['inputs'] = self._parse_inputs_section self._sections['outputs'] = self._parse_outputs_section self._sections['options'] = self._parse_options_section self._unpatched_parse() NumpyDocstring._unpatched_parse = NumpyDocstring._parse NumpyDocstring._parse = patched_parse # -- Project information ----------------------------------------------------- project = 'openconcept' copyright = '2018, Benjamin J. Brelje' author = 'Benjamin J. Brelje' import openconcept # The short X.Y version version = openconcept.__version__ # The full version, including alpha/beta/rc tags release = openconcept.__version__ + ' alpha' # -- General configuration --------------------------------------------------- # If your documentation needs a minimal Sphinx version, state it here. # needs_sphinx = '1.5' # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [ 'sphinx.ext.autodoc', 'sphinx.ext.autosummary', 'sphinx.ext.doctest', 'sphinx.ext.napoleon', 'sphinx.ext.todo', 'sphinx.ext.coverage', 'sphinx.ext.mathjax', 'sphinx.ext.viewcode', 'embed_code', 'embed_options', 'embed_compare', 'embed_shell_cmd', 'embed_bibtex', 'embed_n2', 'tags' ] autodoc_inherit_docstrings = False autodoc_member_order = 'bysource' autosummary_generate = [] # Add any paths that contain templates here, relative to this directory. templates_path = ['_templates'] # The suffix(es) of source filenames. # You can specify multiple suffix as a list of string: # # source_suffix = ['.rst', '.md'] source_suffix = '.rst' # The master toctree document. master_doc = 'index' # The language for content autogenerated by Sphinx. Refer to documentation # for a list of supported languages. # # This is also used if you do content translation via gettext catalogs. # Usually you set "language" from the command line for these cases. language = None # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. # This pattern also affects html_static_path and html_extra_path . exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store'] # The name of the Pygments (syntax highlighting) style to use. pygments_style = 'sphinx' # -- Options for HTML output ------------------------------------------------- # The theme to use for HTML and HTML Help pages. See the documentation for # a list of builtin themes. # html_theme = 'sphinx_rtd_theme' html_style = 'css/override_theme.css' # Theme options are theme-specific and customize the look and feel of a theme # further. For a list of options available for each theme, see the # documentation. # # html_theme_options = {} # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css". html_static_path = ['_static'] # Custom sidebar templates, must be a dictionary that maps document names # to template names. # # The default sidebars (for documents that don't match any pattern) are # defined by theme itself. Builtin themes are using these templates by # default: ``['localtoc.html', 'relations.html', 'sourcelink.html', # 'searchbox.html']``. # # html_sidebars = {} # -- Options for HTMLHelp output --------------------------------------------- # Output file base name for HTML help builder. htmlhelp_basename = 'openconceptdoc' # -- Options for LaTeX output ------------------------------------------------ latex_elements = { # The paper size ('letterpaper' or 'a4paper'). # # 'papersize': 'letterpaper', # The font size ('10pt', '11pt' or '12pt'). # # 'pointsize': '10pt', # Additional stuff for the LaTeX preamble. # # 'preamble': '', # Latex figure (float) alignment # # 'figure_align': 'htbp', } # Grouping the document tree into LaTeX files. List of tuples # (source start file, target name, title, # author, documentclass [howto, manual, or own class]). latex_documents = [ (master_doc, 'openconcept.tex', 'openconcept Documentation', 'Benjamin J. Brelje', 'manual'), ] # -- Options for manual page output ------------------------------------------ # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ (master_doc, 'openconcept', 'openconcept Documentation', [author], 1) ] # -- Options for Texinfo output ---------------------------------------------- # Grouping the document tree into Texinfo files. List of tuples # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ (master_doc, 'openconcept', 'openconcept Documentation', author, 'openconcept', 'One line description of project.', 'Miscellaneous'), ] # -- Extension configuration ------------------------------------------------- # -- Options for intersphinx extension --------------------------------------- # Example configuration for intersphinx: refer to the Python standard library. #intersphinx_mapping = {'https://docs.python.org/': None} # -- Options for todo extension ---------------------------------------------- # If true, `todo` and `todoList` produce output, else they produce nothing. todo_include_todos = True generate_srcdocs = True if generate_srcdocs: # native way # subprocess.call(['sphinx-apidoc','-o','_srcdocs_native','../openconcept']) # os.rename('_srcdocs_native/modules.rst','_srcdocs_native/index.rst') # openmdao way packages = ['analysis', 'analysis.atmospherics', 'analysis.performance', 'components', 'utilities', 'utilities.math'] generate_src_docs(".", "../openconcept", packages) ########################################################################### # auto-created readthedocs.org specific configuration # ########################################################################### # # The following code was added during an automated build on readthedocs.org # It is auto created and injected for every build. The result is based on the # conf.py.tmpl file found in the readthedocs.org codebase: # https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl # # Note: this file shouldn't rely on extra dependencies. import importlib import sys import os.path # Borrowed from six. PY3 = sys.version_info[0] == 3 string_types = str if PY3 else basestring from sphinx import version_info # Get suffix for proper linking to GitHub # This is deprecated in Sphinx 1.3+, # as each page can have its own suffix if globals().get('source_suffix', False): if isinstance(source_suffix, string_types): SUFFIX = source_suffix elif isinstance(source_suffix, (list, tuple)): # Sphinx >= 1.3 supports list/tuple to define multiple suffixes SUFFIX = source_suffix[0] elif isinstance(source_suffix, dict): # Sphinx >= 1.8 supports a mapping dictionary for multiple suffixes SUFFIX = list(source_suffix.keys())[0] # make a ``list()`` for py2/py3 compatibility else: # default to .rst SUFFIX = '.rst' else: SUFFIX = '.rst' # Add RTD Static Path. Add to the end because it overwrites previous files. if not 'html_static_path' in globals(): html_static_path = [] if os.path.exists('_static'): html_static_path.append('_static') # Add RTD Theme only if they aren't overriding it already using_rtd_theme = ( ( 'html_theme' in globals() and html_theme in ['default'] and # Allow people to bail with a hack of having an html_style 'html_style' not in globals() ) or 'html_theme' not in globals() ) if using_rtd_theme: theme = importlib.import_module('sphinx_rtd_theme') html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(theme.get_html_theme_path()) else: html_theme_path = [theme.get_html_theme_path()] if globals().get('websupport2_base_url', False): websupport2_base_url = 'https://readthedocs.com/websupport' websupport2_static_url = 'https://assets.readthedocs.com/' #Add project information to the template context. context = { 'using_theme': using_rtd_theme, 'html_theme': html_theme, 'current_version': "latest", 'version_slug': "latest", 'MEDIA_URL': "https://media.readthedocs.com/media/", 'STATIC_URL': "https://assets.readthedocs.com/", 'PRODUCTION_DOMAIN': "readthedocs.com", 'versions': [ ("latest", "/en/latest/"), ], 'downloads': [ ("html", "//mdolab-openconcept.readthedocs-hosted.com/_/downloads/en/latest/htmlzip/"), ("epub", "//mdolab-openconcept.readthedocs-hosted.com/_/downloads/en/latest/epub/"), ], 'subprojects': [ ], 'slug': 'mdolab-openconcept', 'name': u'openconcept', 'rtd_language': u'en', 'programming_language': u'words', 'canonical_url': 'https://mdolab-openconcept.readthedocs-hosted.com/en/latest/', 'analytics_code': 'None', 'single_version': False, 'conf_py_path': '/docs/', 'api_host': 'https://readthedocs.com', 'github_user': 'mdolab', 'proxied_api_host': '/_', 'github_repo': 'openconcept', 'github_version': 'master', 'display_github': True, 'bitbucket_user': 'None', 'bitbucket_repo': 'None', 'bitbucket_version': 'master', 'display_bitbucket': False, 'gitlab_user': 'None', 'gitlab_repo': 'None', 'gitlab_version': 'master', 'display_gitlab': False, 'READTHEDOCS': True, 'using_theme': (html_theme == "default"), 'new_theme': (html_theme == "sphinx_rtd_theme"), 'source_suffix': SUFFIX, 'ad_free': False, 'docsearch_disabled': False, 'user_analytics_code': '', 'global_analytics_code': 'UA-17997319-2', 'commit': '697fb9cb', } # For sphinx >=1.8 we can use html_baseurl to set the canonical URL. # https://www.sphinx-doc.org/en/master/usage/configuration.html#confval-html_baseurl if version_info >= (1, 8): if not globals().get('html_baseurl'): html_baseurl = context['canonical_url'] context['canonical_url'] = None if 'html_context' in globals(): html_context.update(context) else: html_context = context # Add custom RTD extension if 'extensions' in globals(): # Insert at the beginning because it can interfere # with other extensions. # See https://github.com/rtfd/readthedocs.org/pull/4054 extensions.insert(0, "readthedocs_ext.readthedocs") else: extensions = ["readthedocs_ext.readthedocs"] # Add External version warning banner to the external version documentation if 'branch' == 'external': extensions.insert(1, "readthedocs_ext.external_version_warning") readthedocs_vcs_url = 'None' readthedocs_build_url = 'https://readthedocs.com/projects/mdolab-openconcept/builds/834799/' project_language = 'en' # User's Sphinx configurations language_user = globals().get('language', None) latex_engine_user = globals().get('latex_engine', None) latex_elements_user = globals().get('latex_elements', None) # Remove this once xindy gets installed in Docker image and XINDYOPS # env variable is supported # https://github.com/rtfd/readthedocs-docker-images/pull/98 latex_use_xindy = False chinese = any([ language_user in ('zh_CN', 'zh_TW'), project_language in ('zh_CN', 'zh_TW'), ]) japanese = any([ language_user == 'ja', project_language == 'ja', ]) if chinese: latex_engine = latex_engine_user or 'xelatex' latex_elements_rtd = { 'preamble': '\\usepackage[UTF8]{ctex}\n', } latex_elements = latex_elements_user or latex_elements_rtd elif japanese: latex_engine = latex_engine_user or 'platex' # Make sure our build directory is always excluded exclude_patterns = globals().get('exclude_patterns', []) exclude_patterns.extend(['_build']) [rtd-command-info] start-time: 2022-01-26T16:47:57.375047Z, end-time: 2022-01-26T16:48:16.564530Z, duration: 19, exit-code: 0 python -m sphinx -T -b html -d _build/doctrees -D language=en . _build/html Running Sphinx v3.5.4 loading translations [en]... done making output directory... done building [mo]: targets for 0 po files that are out of date building [html]: targets for 54 source files that are out of date updating environment: [new config] 54 added, 0 changed, 0 removed reading sources... 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