Read the Docs build information Build id: 804653 Project: institute-for-disease-modeling-emodpy-malaria Version: latest Commit: 865462568a09f791e089c756539f915d8cf271f9 Date: 2021-12-18T16:05:10.738481Z State: finished Success: True [rtd-command-info] start-time: 2021-12-18T16:05:12.216704Z, end-time: 2021-12-18T16:05:14.639241Z, duration: 2, exit-code: 0 git clone --no-single-branch --depth 50 git@github.com:InstituteforDiseaseModeling/emodpy-malaria.git . Cloning into '.'... Warning: Permanently added 'github.com,192.30.255.113' (ECDSA) to the list of known hosts. [rtd-command-info] start-time: 2021-12-18T16:05:14.771257Z, end-time: 2021-12-18T16:05:15.012015Z, duration: 0, exit-code: 0 git checkout --force origin/main Note: checking out 'origin/main'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at 8654625 Bump version: 1.0.2 → 1.0.3 [rtd-command-info] start-time: 2021-12-18T16:05:15.119592Z, end-time: 2021-12-18T16:05:15.188214Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2021-12-18T16:05:16.280880Z, end-time: 2021-12-18T16:05:20.435609Z, duration: 4, exit-code: 0 python3.7 -mvirtualenv Using base prefix '/home/docs/.pyenv/versions/3.7.9' New python executable in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin/python3.7 Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin/python Installing setuptools, pip, wheel... done. [rtd-command-info] start-time: 2021-12-18T16:05:20.548447Z, end-time: 2021-12-18T16:05:22.929183Z, duration: 2, exit-code: 0 python -m pip install --upgrade --no-cache-dir pip setuptools<58.3.0 Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/simple Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (21.3.1) Collecting setuptools<58.3.0 Downloading setuptools-58.2.0-py3-none-any.whl (946 kB) Installing collected packages: setuptools Attempting uninstall: setuptools Found existing installation: setuptools 59.7.0 Uninstalling setuptools-59.7.0: Successfully uninstalled setuptools-59.7.0 Successfully installed setuptools-58.2.0 [rtd-command-info] start-time: 2021-12-18T16:05:23.046744Z, end-time: 2021-12-18T16:05:31.617169Z, duration: 8, exit-code: 0 python -m pip install --upgrade --no-cache-dir mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<2.2 Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/simple Collecting mock==1.0.1 Downloading mock-1.0.1.zip (861 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting pillow==5.4.1 Downloading Pillow-5.4.1-cp37-cp37m-manylinux1_x86_64.whl (2.0 MB) Collecting alabaster!=0.7.5,<0.8,>=0.7 Downloading alabaster-0.7.12-py2.py3-none-any.whl (14 kB) Collecting commonmark==0.8.1 Downloading commonmark-0.8.1-py2.py3-none-any.whl (47 kB) Collecting recommonmark==0.5.0 Downloading recommonmark-0.5.0-py2.py3-none-any.whl (9.8 kB) Collecting sphinx<2 Downloading Sphinx-1.8.6-py2.py3-none-any.whl (3.1 MB) Collecting sphinx-rtd-theme<0.5 Downloading sphinx_rtd_theme-0.4.3-py2.py3-none-any.whl (6.4 MB) Collecting readthedocs-sphinx-ext<2.2 Downloading readthedocs_sphinx_ext-2.1.4-py2.py3-none-any.whl (29 kB) Collecting future Downloading future-0.18.2.tar.gz (829 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting docutils>=0.11 Downloading docutils-0.18.1-py2.py3-none-any.whl (570 kB) Collecting packaging Downloading packaging-21.3-py3-none-any.whl (40 kB) Collecting sphinxcontrib-websupport Downloading sphinxcontrib_websupport-1.2.4-py2.py3-none-any.whl (39 kB) Collecting imagesize Downloading imagesize-1.3.0-py2.py3-none-any.whl (5.2 kB) Collecting snowballstemmer>=1.1 Downloading snowballstemmer-2.2.0-py2.py3-none-any.whl (93 kB) Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx<2) (58.2.0) Collecting docutils>=0.11 Downloading docutils-0.17.1-py2.py3-none-any.whl (575 kB) Collecting requests>=2.0.0 Downloading requests-2.26.0-py2.py3-none-any.whl (62 kB) Collecting Pygments>=2.0 Downloading Pygments-2.10.0-py3-none-any.whl (1.0 MB) Collecting six>=1.5 Downloading six-1.16.0-py2.py3-none-any.whl (11 kB) Collecting Jinja2>=2.3 Downloading Jinja2-3.0.3-py3-none-any.whl (133 kB) Collecting babel!=2.0,>=1.3 Downloading Babel-2.9.1-py2.py3-none-any.whl (8.8 MB) Collecting pytz>=2015.7 Downloading pytz-2021.3-py2.py3-none-any.whl (503 kB) Collecting MarkupSafe>=2.0 Downloading MarkupSafe-2.0.1-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (31 kB) Collecting certifi>=2017.4.17 Downloading certifi-2021.10.8-py2.py3-none-any.whl (149 kB) Collecting urllib3<1.27,>=1.21.1 Downloading urllib3-1.26.7-py2.py3-none-any.whl (138 kB) Collecting idna<4,>=2.5 Downloading idna-3.3-py3-none-any.whl (61 kB) Collecting charset-normalizer~=2.0.0 Downloading charset_normalizer-2.0.9-py3-none-any.whl (39 kB) Collecting pyparsing!=3.0.5,>=2.0.2 Downloading pyparsing-3.0.6-py3-none-any.whl (97 kB) Collecting sphinxcontrib-serializinghtml Downloading sphinxcontrib_serializinghtml-1.1.5-py2.py3-none-any.whl (94 kB) Building wheels for collected packages: mock, future Building wheel for mock (setup.py): started Building wheel for mock (setup.py): finished with status 'done' Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23772 sha256=9d1be90c8789e420c68832443468c30c7e967e84a63fd5ae1227eb039152eca9 Stored in directory: /tmp/pip-ephem-wheel-cache-lw0yewsy/wheels/7a/94/b1/0fdc5339a5bd487a5cc15421ec200d9ba3e2aa7190e4a727f1 Building wheel for future (setup.py): started Building wheel for future (setup.py): finished with status 'done' Created wheel for future: filename=future-0.18.2-py3-none-any.whl size=491070 sha256=33ac372f78194e70811e0578d3520bc487e74b29d69b4ef6c8efe3d81c207625 Stored in directory: /tmp/pip-ephem-wheel-cache-lw0yewsy/wheels/56/b0/fe/4410d17b32f1f0c3cf54cdfb2bc04d7b4b8f4ae377e2229ba0 Successfully built mock future Installing collected packages: urllib3, sphinxcontrib-serializinghtml, pytz, pyparsing, MarkupSafe, idna, charset-normalizer, certifi, sphinxcontrib-websupport, snowballstemmer, six, requests, Pygments, packaging, Jinja2, imagesize, future, docutils, babel, alabaster, sphinx, commonmark, sphinx-rtd-theme, recommonmark, readthedocs-sphinx-ext, pillow, mock Successfully installed Jinja2-3.0.3 MarkupSafe-2.0.1 Pygments-2.10.0 alabaster-0.7.12 babel-2.9.1 certifi-2021.10.8 charset-normalizer-2.0.9 commonmark-0.8.1 docutils-0.17.1 future-0.18.2 idna-3.3 imagesize-1.3.0 mock-1.0.1 packaging-21.3 pillow-5.4.1 pyparsing-3.0.6 pytz-2021.3 readthedocs-sphinx-ext-2.1.4 recommonmark-0.5.0 requests-2.26.0 six-1.16.0 snowballstemmer-2.2.0 sphinx-1.8.6 sphinx-rtd-theme-0.4.3 sphinxcontrib-serializinghtml-1.1.5 sphinxcontrib-websupport-1.2.4 urllib3-1.26.7 [rtd-command-info] start-time: 2021-12-18T16:05:31.747912Z, end-time: 2021-12-18T16:06:05.173856Z, duration: 33, exit-code: 0 python -m pip install --exists-action=w --no-cache-dir -r requirements.txt Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/simple Collecting emodpy~=1.16.0 Downloading https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/emodpy/1.16.2/emodpy-1.16.2-py3-none-any.whl (116 kB) Collecting emod-malaria==0.0.10 Downloading https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/emod-malaria/0.0.10/emod_malaria-0.0.10-py3-none-any.whl (4.6 MB) Collecting snakemake~=6.12.3 Downloading snakemake-6.12.3.tar.gz (278 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting idmtools-platform-comps~=1.6.0 Downloading 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sha256=6ba160bbb63b3960f93104a270144c20462d4cef29b816a9bfe656d368f7a31c Stored in directory: /tmp/pip-ephem-wheel-cache-v8ajf_4b/wheels/a6/eb/38/098b4274b2c1bb19950c114dd62d2856c19d1a4fc704735774 Building wheel for connection-pool (setup.py): started Building wheel for connection-pool (setup.py): finished with status 'done' Created wheel for connection-pool: filename=connection_pool-0.0.3-py3-none-any.whl size=4083 sha256=a0788a13bfd1330b7bf0cb61b16f4499f15585a75461362672fa848bac75f808 Stored in directory: /tmp/pip-ephem-wheel-cache-v8ajf_4b/wheels/a0/66/fa/93d22c4aed2fcf82f4d7a0ab8587cb3e1918153471360f8e07 Building wheel for bs4 (setup.py): started Building wheel for bs4 (setup.py): finished with status 'done' Created wheel for bs4: filename=bs4-0.0.1-py3-none-any.whl size=1271 sha256=ebd269fc3d740054c917e38c63d07e94afbaa85d5dc8f9134bd5e4c2a33084da Stored in directory: /tmp/pip-ephem-wheel-cache-v8ajf_4b/wheels/0a/9e/ba/20e5bbc1afef3a491f0b3bb74d508f99403aabe76eda2167ca Building wheel for stopit (setup.py): started Building wheel for stopit (setup.py): finished with status 'done' Created wheel for stopit: filename=stopit-1.1.2-py3-none-any.whl size=11952 sha256=93930f18010cec251e8311179b9bc049e90c7d82e17ace3b63312d8e14d2a22b Stored in directory: /tmp/pip-ephem-wheel-cache-v8ajf_4b/wheels/e2/d2/79/eaf81edb391e27c87f51b8ef901ecc85a5363dc96b8b8d71e3 Building wheel for sklearn (setup.py): started Building wheel for sklearn (setup.py): finished with status 'done' Created wheel for sklearn: filename=sklearn-0.0-py2.py3-none-any.whl size=1309 sha256=a31441984a7d40f0fe7d2ac28301b05bf24479a00ec23e3589f771778402fc7b Stored in directory: /tmp/pip-ephem-wheel-cache-v8ajf_4b/wheels/46/ef/c3/157e41f5ee1372d1be90b09f74f82b10e391eaacca8f22d33e Building wheel for docopt (setup.py): started Building wheel for docopt (setup.py): finished with status 'done' Created wheel for docopt: filename=docopt-0.6.2-py2.py3-none-any.whl size=13724 sha256=7bf2084a65721da7544fad1dbdd86211097857ea87154279bf008a43cf64dfce Stored in directory: /tmp/pip-ephem-wheel-cache-v8ajf_4b/wheels/72/b0/3f/1d95f96ff986c7dfffe46ce2be4062f38ebd04b506c77c81b9 Successfully built snakemake connection-pool bs4 stopit sklearn docopt Installing collected packages: zipp, typing-extensions, pycparser, numpy, importlib-metadata, yarg, toml, threadpoolctl, scipy, python-dateutil, py, pluggy, packaging, joblib, iniconfig, humanfriendly, docopt, cffi, cached-property, attrs, xdg, traitlets, tqdm, tabulate, soupsieve, smmap, scikit-learn, pyyaml, pytest, pyrsistent, pygit2, pipreqs, pandas, more-itertools, jeepney, importlib-resources, diskcache, cryptography, coloredlogs, backoff, sklearn, shapely, SecretStorage, pytest-lazy-fixture, pyproj, pyCOMPS, pillow, kiwisolver, jupyter-core, jsonschema, ipython-genutils, idmtools, gitdb, geographiclib, fonttools, cycler, beautifulsoup4, wrapt, toposort, stopit, smart-open, ratelimiter, pulp, psutil, nbformat, matplotlib, keyring, idmtools-platform-comps, idmtools-models, gitpython, filelock, emod-api, datrie, connection-pool, configargparse, click, bs4, astunparse, astor, appdirs, snakemake, emodpy, emod-malaria Attempting uninstall: packaging Found existing installation: packaging 21.3 Uninstalling packaging-21.3: Successfully uninstalled packaging-21.3 Attempting uninstall: pillow Found existing installation: Pillow 5.4.1 Uninstalling Pillow-5.4.1: Successfully uninstalled Pillow-5.4.1 Successfully installed SecretStorage-3.3.1 appdirs-1.4.4 astor-0.8.1 astunparse-1.6.3 attrs-21.2.0 backoff-1.10.0 beautifulsoup4-4.10.0 bs4-0.0.1 cached-property-1.5.2 cffi-1.15.0 click-7.1.2 coloredlogs-15.0.1 configargparse-1.5.3 connection-pool-0.0.3 cryptography-36.0.1 cycler-0.11.0 datrie-0.8.2 diskcache-5.2.1 docopt-0.6.2 emod-api-1.19.2 emod-malaria-0.0.10 emodpy-1.16.2 filelock-3.4.0 fonttools-4.28.4 geographiclib-1.52 gitdb-4.0.9 gitpython-3.1.24 humanfriendly-10.0 idmtools-1.6.4 idmtools-models-1.6.4 idmtools-platform-comps-1.6.4 importlib-metadata-4.9.0 importlib-resources-5.4.0 iniconfig-1.1.1 ipython-genutils-0.2.0 jeepney-0.7.1 joblib-1.1.0 jsonschema-4.3.1 jupyter-core-4.9.1 keyring-23.4.0 kiwisolver-1.3.2 matplotlib-3.5.1 more-itertools-8.8.0 nbformat-5.1.3 numpy-1.21.4 packaging-20.9 pandas-1.1.5 pillow-8.4.0 pipreqs-0.4.11 pluggy-0.13.1 psutil-5.8.0 pulp-2.6.0 py-1.11.0 pyCOMPS-2.5.0 pycparser-2.21 pygit2-1.5.0 pyproj-3.2.1 pyrsistent-0.18.0 pytest-6.2.5 pytest-lazy-fixture-0.6.3 python-dateutil-2.8.2 pyyaml-5.4.1 ratelimiter-1.2.0.post0 scikit-learn-1.0.1 scipy-1.7.3 shapely-1.8.0 sklearn-0.0 smart-open-5.2.1 smmap-5.0.0 snakemake-6.12.3 soupsieve-2.3.1 stopit-1.1.2 tabulate-0.8.9 threadpoolctl-3.0.0 toml-0.10.2 toposort-1.7 tqdm-4.62.3 traitlets-5.1.1 typing-extensions-4.0.1 wrapt-1.13.3 xdg-5.1.1 yarg-0.1.9 zipp-3.6.0 [rtd-command-info] start-time: 2021-12-18T16:06:05.284831Z, end-time: 2021-12-18T16:06:10.647923Z, duration: 5, exit-code: 0 python -m pip install --exists-action=w --no-cache-dir -r docs/requirements.txt Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/simple Collecting plantweb~=1.2.1 Downloading plantweb-1.2.1-py3-none-any.whl (20 kB) Collecting pygit2~=1.4.0 Downloading pygit2-1.4.0-cp37-cp37m-manylinux2010_x86_64.whl (3.0 MB) Collecting PyGithub~=1.54 Downloading PyGithub-1.55-py3-none-any.whl (291 kB) Collecting sphinx-copybutton~=0.3.1 Downloading sphinx_copybutton-0.3.3-py3-none-any.whl (12 kB) Collecting sphinx-rtd-theme~=0.5.0 Downloading sphinx_rtd_theme-0.5.2-py2.py3-none-any.whl (9.1 MB) Collecting sphinxcontrib-napoleon~=0.7 Downloading sphinxcontrib_napoleon-0.7-py2.py3-none-any.whl (17 kB) Collecting sphinxcontrib-programoutput~=0.16 Downloading sphinxcontrib_programoutput-0.17-py2.py3-none-any.whl (22 kB) Collecting sphinx~=3.3.1 Downloading Sphinx-3.3.1-py3-none-any.whl (2.9 MB) Collecting sphinxext.remoteliteralinclude Downloading 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docs/requirements.txt (line 2)) (1.15.0) Requirement already satisfied: cached-property in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from pygit2~=1.4.0->-r docs/requirements.txt (line 2)) (1.5.2) Collecting pynacl>=1.4.0 Downloading PyNaCl-1.4.0-cp35-abi3-manylinux1_x86_64.whl (961 kB) Collecting pyjwt>=2.0 Downloading PyJWT-2.3.0-py3-none-any.whl (16 kB) Collecting deprecated Downloading Deprecated-1.2.13-py2.py3-none-any.whl (9.6 kB) Collecting docutils Downloading docutils-0.16-py2.py3-none-any.whl (548 kB) Collecting pockets>=0.3 Downloading pockets-0.9.1-py2.py3-none-any.whl (26 kB) Requirement already satisfied: babel>=1.3 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (2.9.1) Collecting sphinxcontrib-jsmath Downloading sphinxcontrib_jsmath-1.0.1-py2.py3-none-any.whl (5.1 kB) Collecting sphinxcontrib-qthelp Downloading sphinxcontrib_qthelp-1.0.3-py2.py3-none-any.whl (90 kB) Requirement already satisfied: packaging in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (20.9) Collecting sphinxcontrib-applehelp Downloading sphinxcontrib_applehelp-1.0.2-py2.py3-none-any.whl (121 kB) Collecting sphinxcontrib-devhelp Downloading sphinxcontrib_devhelp-1.0.2-py2.py3-none-any.whl (84 kB) Requirement already satisfied: imagesize in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (1.3.0) Requirement already satisfied: Jinja2>=2.3 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (3.0.3) Requirement already satisfied: Pygments>=2.0 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (2.10.0) Requirement already satisfied: snowballstemmer>=1.1 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (2.2.0) Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (58.2.0) Collecting sphinxcontrib-htmlhelp Downloading sphinxcontrib_htmlhelp-2.0.0-py2.py3-none-any.whl (100 kB) Requirement already satisfied: alabaster<0.8,>=0.7 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (0.7.12) Requirement already satisfied: sphinxcontrib-serializinghtml in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (1.1.5) Requirement already satisfied: pytz>=2015.7 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from babel>=1.3->sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (2021.3) Requirement already satisfied: pycparser in 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(2021.10.8) Requirement already satisfied: charset-normalizer~=2.0.0 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from requests->plantweb~=1.2.1->-r docs/requirements.txt (line 1)) (2.0.9) Requirement already satisfied: idna<4,>=2.5 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from requests->plantweb~=1.2.1->-r docs/requirements.txt (line 1)) (3.3) Requirement already satisfied: wrapt<2,>=1.10 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from deprecated->PyGithub~=1.54->-r docs/requirements.txt (line 3)) (1.13.3) Requirement already satisfied: pyparsing>=2.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from packaging->sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (3.0.6) Installing collected packages: sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, docutils, sphinx, pynacl, pyjwt, pockets, deprecated, sphinxext.remoteliteralinclude, sphinxcontrib-programoutput, sphinxcontrib-napoleon, sphinx-rtd-theme, sphinx-copybutton, PyGithub, pygit2, plantweb Attempting uninstall: docutils Found existing installation: docutils 0.17.1 Uninstalling docutils-0.17.1: Successfully uninstalled docutils-0.17.1 Attempting uninstall: sphinx Found existing installation: Sphinx 1.8.6 Uninstalling Sphinx-1.8.6: Successfully uninstalled Sphinx-1.8.6 Attempting uninstall: sphinx-rtd-theme Found existing installation: sphinx-rtd-theme 0.4.3 Uninstalling sphinx-rtd-theme-0.4.3: Successfully uninstalled sphinx-rtd-theme-0.4.3 Attempting uninstall: pygit2 Found existing installation: pygit2 1.5.0 Uninstalling pygit2-1.5.0: Successfully uninstalled pygit2-1.5.0 Successfully installed PyGithub-1.55 deprecated-1.2.13 docutils-0.16 plantweb-1.2.1 pockets-0.9.1 pygit2-1.4.0 pyjwt-2.3.0 pynacl-1.4.0 sphinx-3.3.1 sphinx-copybutton-0.3.3 sphinx-rtd-theme-0.5.2 sphinxcontrib-applehelp-1.0.2 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-htmlhelp-2.0.0 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-napoleon-0.7 sphinxcontrib-programoutput-0.17 sphinxcontrib-qthelp-1.0.3 sphinxext.remoteliteralinclude-0.3.0 [rtd-command-info] start-time: 2021-12-18T16:06:10.759361Z, end-time: 2021-12-18T16:06:11.996588Z, duration: 1, exit-code: 0 python ./setup.py install --force running install running bdist_egg running egg_info creating emodpy_malaria.egg-info writing emodpy_malaria.egg-info/PKG-INFO writing dependency_links to emodpy_malaria.egg-info/dependency_links.txt writing requirements to emodpy_malaria.egg-info/requires.txt writing top-level names to emodpy_malaria.egg-info/top_level.txt writing manifest file 'emodpy_malaria.egg-info/SOURCES.txt' reading manifest file 'emodpy_malaria.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'emodpy_malaria.egg-info/SOURCES.txt' installing library code to build/bdist.linux-x86_64/egg running install_lib running build_py creating build creating build/lib creating build/lib/emodpy_malaria copying emodpy_malaria/malaria_config.py -> build/lib/emodpy_malaria copying emodpy_malaria/vector_config.py -> build/lib/emodpy_malaria copying emodpy_malaria/__init__.py -> build/lib/emodpy_malaria copying emodpy_malaria/malaria_vector_species_params.py -> build/lib/emodpy_malaria creating build/lib/tests copying tests/add_itn.py -> build/lib/tests copying tests/__init__.py -> build/lib/tests creating build/lib/emodpy_malaria/reporters copying emodpy_malaria/reporters/builtin.py -> build/lib/emodpy_malaria/reporters copying emodpy_malaria/reporters/__init__.py -> build/lib/emodpy_malaria/reporters creating build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/bednet.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/ivermectin.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/sugartrap.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/diag_survey.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/irs.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/spacespraying.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/inputeir.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/mosquitorelease.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/treatment_seeking.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/community_health_worker.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/udbednet.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/drug.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/outbreak.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/__init__.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/vaccine.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/drug_campaign.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/outdoorrestkill.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/common.py -> build/lib/emodpy_malaria/interventions creating build/lib/emodpy_malaria/demographics copying emodpy_malaria/demographics/MalariaDemographics.py -> build/lib/emodpy_malaria/demographics copying emodpy_malaria/demographics/__init__.py -> build/lib/emodpy_malaria/demographics creating build/lib/tests/unittests copying tests/unittests/test_malaria_interventions.py -> build/lib/tests/unittests copying tests/unittests/get_latest_schema.py -> build/lib/tests/unittests copying tests/unittests/test_treatment_seeking.py -> build/lib/tests/unittests copying tests/unittests/test_malaria_reporters.py -> build/lib/tests/unittests copying tests/unittests/test_malaria_interventions_as_files.py -> build/lib/tests/unittests copying tests/unittests/get_unittest_coverage.py -> build/lib/tests/unittests copying tests/unittests/test_malaria_config.py -> build/lib/tests/unittests copying tests/unittests/schema_path_file.py -> build/lib/tests/unittests copying tests/unittests/test_import.py -> build/lib/tests/unittests copying tests/unittests/__init__.py -> build/lib/tests/unittests copying emodpy_malaria/malaria_drug_params.csv -> build/lib/emodpy_malaria creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/egg creating build/bdist.linux-x86_64/egg/emodpy_malaria copying build/lib/emodpy_malaria/malaria_config.py -> build/bdist.linux-x86_64/egg/emodpy_malaria creating build/bdist.linux-x86_64/egg/emodpy_malaria/reporters copying build/lib/emodpy_malaria/reporters/builtin.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/reporters copying build/lib/emodpy_malaria/reporters/__init__.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/reporters copying build/lib/emodpy_malaria/vector_config.py -> build/bdist.linux-x86_64/egg/emodpy_malaria copying build/lib/emodpy_malaria/malaria_drug_params.csv -> build/bdist.linux-x86_64/egg/emodpy_malaria creating build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/bednet.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/ivermectin.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/sugartrap.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/diag_survey.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/irs.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/spacespraying.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/inputeir.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/mosquitorelease.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/treatment_seeking.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/community_health_worker.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/udbednet.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/drug.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/outbreak.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/__init__.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/vaccine.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/drug_campaign.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/outdoorrestkill.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/common.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions creating build/bdist.linux-x86_64/egg/emodpy_malaria/demographics copying build/lib/emodpy_malaria/demographics/MalariaDemographics.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/demographics copying build/lib/emodpy_malaria/demographics/__init__.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/demographics copying build/lib/emodpy_malaria/__init__.py -> build/bdist.linux-x86_64/egg/emodpy_malaria copying build/lib/emodpy_malaria/malaria_vector_species_params.py -> build/bdist.linux-x86_64/egg/emodpy_malaria creating build/bdist.linux-x86_64/egg/tests creating build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_malaria_interventions.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/get_latest_schema.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_treatment_seeking.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_malaria_reporters.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_malaria_interventions_as_files.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/get_unittest_coverage.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_malaria_config.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/schema_path_file.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_import.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/__init__.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/add_itn.py -> build/bdist.linux-x86_64/egg/tests copying build/lib/tests/__init__.py -> build/bdist.linux-x86_64/egg/tests byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/malaria_config.py to malaria_config.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/reporters/builtin.py to builtin.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/reporters/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/vector_config.py to vector_config.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/bednet.py to bednet.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/ivermectin.py to ivermectin.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/sugartrap.py to sugartrap.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/diag_survey.py to diag_survey.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/irs.py to irs.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/spacespraying.py to spacespraying.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/inputeir.py to inputeir.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/mosquitorelease.py to mosquitorelease.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/treatment_seeking.py to treatment_seeking.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/community_health_worker.py to community_health_worker.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/udbednet.py to udbednet.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/drug.py to drug.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/outbreak.py to outbreak.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/vaccine.py to vaccine.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/drug_campaign.py to drug_campaign.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/outdoorrestkill.py to outdoorrestkill.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/common.py to common.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/demographics/MalariaDemographics.py to MalariaDemographics.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/demographics/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/malaria_vector_species_params.py to malaria_vector_species_params.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_malaria_interventions.py to test_malaria_interventions.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/get_latest_schema.py to get_latest_schema.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_treatment_seeking.py to test_treatment_seeking.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_malaria_reporters.py to test_malaria_reporters.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_malaria_interventions_as_files.py to test_malaria_interventions_as_files.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/get_unittest_coverage.py to get_unittest_coverage.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_malaria_config.py to test_malaria_config.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/schema_path_file.py to schema_path_file.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_import.py to test_import.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/add_itn.py to add_itn.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/__init__.py to __init__.cpython-37.pyc creating build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO zip_safe flag not set; analyzing archive contents... emodpy_malaria.__pycache__.malaria_config.cpython-37: module references __file__ tests.unittests.__pycache__.schema_path_file.cpython-37: module references __file__ tests.unittests.__pycache__.test_malaria_config.cpython-37: module references __file__ tests.unittests.__pycache__.test_malaria_interventions.cpython-37: module references __file__ tests.unittests.__pycache__.test_malaria_reporters.cpython-37: module references __file__ tests.unittests.__pycache__.test_treatment_seeking.cpython-37: module references __file__ creating dist creating 'dist/emodpy_malaria-1.0.3-py3.7.egg' and adding 'build/bdist.linux-x86_64/egg' to it removing 'build/bdist.linux-x86_64/egg' (and everything under it) Processing emodpy_malaria-1.0.3-py3.7.egg creating /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages/emodpy_malaria-1.0.3-py3.7.egg Extracting emodpy_malaria-1.0.3-py3.7.egg to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Adding emodpy-malaria 1.0.3 to easy-install.pth file Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages/emodpy_malaria-1.0.3-py3.7.egg Processing dependencies for emodpy-malaria==1.0.3 Searching for snakemake==6.12.3 Best match: snakemake 6.12.3 Adding snakemake 6.12.3 to easy-install.pth file Installing snakemake script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing snakemake-bash-completion script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for emod-malaria==0.0.10 Best match: emod-malaria 0.0.10 Adding emod-malaria 0.0.10 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for emodpy==1.16.2 Best match: emodpy 1.16.2 Adding emodpy 1.16.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for smart-open==5.2.1 Best match: smart-open 5.2.1 Adding smart-open 5.2.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for filelock==3.4.0 Best match: filelock 3.4.0 Adding filelock 3.4.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for connection-pool==0.0.3 Best match: connection-pool 0.0.3 Adding connection-pool 0.0.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for psutil==5.8.0 Best match: psutil 5.8.0 Adding psutil 5.8.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for PuLP==2.6.0 Best match: PuLP 2.6.0 Adding PuLP 2.6.0 to easy-install.pth file Installing pulptest script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for PyYAML==5.4.1 Best match: PyYAML 5.4.1 Adding PyYAML 5.4.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for datrie==0.8.2 Best match: datrie 0.8.2 Adding datrie 0.8.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for ratelimiter==1.2.0.post0 Best match: ratelimiter 1.2.0.post0 Adding ratelimiter 1.2.0.post0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for tabulate==0.8.9 Best match: tabulate 0.8.9 Adding tabulate 0.8.9 to easy-install.pth file Installing tabulate script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for wrapt==1.13.3 Best match: wrapt 1.13.3 Adding wrapt 1.13.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for nbformat==5.1.3 Best match: nbformat 5.1.3 Adding nbformat 5.1.3 to easy-install.pth file Installing jupyter-trust script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for jsonschema==4.3.1 Best match: jsonschema 4.3.1 Adding jsonschema 4.3.1 to easy-install.pth file Installing jsonschema script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for toposort==1.7 Best match: toposort 1.7 Adding toposort 1.7 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for appdirs==1.4.4 Best match: appdirs 1.4.4 Adding appdirs 1.4.4 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for docutils==0.16 Best match: docutils 0.16 Adding docutils 0.16 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for stopit==1.1.2 Best match: stopit 1.1.2 Adding stopit 1.1.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for requests==2.26.0 Best match: requests 2.26.0 Adding requests 2.26.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for ConfigArgParse==1.5.3 Best match: ConfigArgParse 1.5.3 Adding ConfigArgParse 1.5.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for GitPython==3.1.24 Best match: GitPython 3.1.24 Adding GitPython 3.1.24 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for matplotlib==3.5.1 Best match: matplotlib 3.5.1 Adding matplotlib 3.5.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for click==7.1.2 Best match: click 7.1.2 Adding click 7.1.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for idmtools-platform-comps==1.6.4 Best match: idmtools-platform-comps 1.6.4 Adding idmtools-platform-comps 1.6.4 to easy-install.pth file Installing comps-cli script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for astunparse==1.6.3 Best match: astunparse 1.6.3 Adding astunparse 1.6.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for idmtools==1.6.4 Best match: idmtools 1.6.4 Adding idmtools 1.6.4 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for astor==0.8.1 Best match: astor 0.8.1 Adding astor 0.8.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for idmtools-models==1.6.4 Best match: idmtools-models 1.6.4 Adding idmtools-models 1.6.4 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for keyring==23.4.0 Best match: keyring 23.4.0 Adding keyring 23.4.0 to easy-install.pth file Installing keyring script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for bs4==0.0.1 Best match: bs4 0.0.1 Adding bs4 0.0.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for emod-api==1.19.2 Best match: emod-api 1.19.2 Adding emod-api 1.19.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for jupyter-core==4.9.1 Best match: jupyter-core 4.9.1 Adding jupyter-core 4.9.1 to easy-install.pth file Installing jupyter script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing jupyter-migrate script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing jupyter-troubleshoot script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for traitlets==5.1.1 Best match: traitlets 5.1.1 Adding traitlets 5.1.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for ipython-genutils==0.2.0 Best match: ipython-genutils 0.2.0 Adding ipython-genutils 0.2.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pyrsistent==0.18.0 Best match: pyrsistent 0.18.0 Adding pyrsistent 0.18.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for importlib-resources==5.4.0 Best match: importlib-resources 5.4.0 Adding importlib-resources 5.4.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for typing-extensions==4.0.1 Best match: typing-extensions 4.0.1 Adding typing-extensions 4.0.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for attrs==21.2.0 Best match: attrs 21.2.0 Adding attrs 21.2.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for importlib-metadata==4.9.0 Best match: importlib-metadata 4.9.0 Adding importlib-metadata 4.9.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for urllib3==1.26.7 Best match: urllib3 1.26.7 Adding urllib3 1.26.7 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for charset-normalizer==2.0.9 Best match: charset-normalizer 2.0.9 Adding charset-normalizer 2.0.9 to easy-install.pth file Installing normalizer script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for idna==3.3 Best match: idna 3.3 Adding idna 3.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for certifi==2021.10.8 Best match: certifi 2021.10.8 Adding certifi 2021.10.8 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for gitdb==4.0.9 Best match: gitdb 4.0.9 Adding gitdb 4.0.9 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for python-dateutil==2.8.2 Best match: python-dateutil 2.8.2 Adding python-dateutil 2.8.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for packaging==20.9 Best match: packaging 20.9 Adding packaging 20.9 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for Pillow==8.4.0 Best match: Pillow 8.4.0 Adding Pillow 8.4.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for kiwisolver==1.3.2 Best match: kiwisolver 1.3.2 Adding kiwisolver 1.3.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for numpy==1.21.4 Best match: numpy 1.21.4 Adding numpy 1.21.4 to easy-install.pth file Installing f2py script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing f2py3 script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing f2py3.7 script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pyparsing==3.0.6 Best match: pyparsing 3.0.6 Adding pyparsing 3.0.6 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for cycler==0.11.0 Best match: cycler 0.11.0 Adding cycler 0.11.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for fonttools==4.28.4 Best match: fonttools 4.28.4 Adding fonttools 4.28.4 to easy-install.pth file Installing fonttools script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing pyftmerge script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing pyftsubset script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing ttx script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for Jinja2==3.0.3 Best match: Jinja2 3.0.3 Adding Jinja2 3.0.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pyCOMPS==2.5.0 Best match: pyCOMPS 2.5.0 Adding pyCOMPS 2.5.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pytest-lazy-fixture==0.6.3 Best match: pytest-lazy-fixture 0.6.3 Adding pytest-lazy-fixture 0.6.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for tqdm==4.62.3 Best match: tqdm 4.62.3 Adding tqdm 4.62.3 to easy-install.pth file Installing tqdm script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for wheel==0.37.0 Best match: wheel 0.37.0 Adding wheel 0.37.0 to easy-install.pth file Installing wheel script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for six==1.16.0 Best match: six 1.16.0 Adding six 1.16.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pandas==1.1.5 Best match: pandas 1.1.5 Adding pandas 1.1.5 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pygit2==1.4.0 Best match: pygit2 1.4.0 Adding pygit2 1.4.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pluggy==0.13.1 Best match: pluggy 0.13.1 Adding pluggy 0.13.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for more-itertools==8.8.0 Best match: more-itertools 8.8.0 Adding more-itertools 8.8.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for coloredlogs==15.0.1 Best match: coloredlogs 15.0.1 Adding coloredlogs 15.0.1 to easy-install.pth file Installing coloredlogs script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for diskcache==5.2.1 Best match: diskcache 5.2.1 Adding diskcache 5.2.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for backoff==1.10.0 Best match: backoff 1.10.0 Adding backoff 1.10.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pipreqs==0.4.11 Best match: pipreqs 0.4.11 Adding pipreqs 0.4.11 to easy-install.pth file Installing pipreqs script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for SecretStorage==3.3.1 Best match: SecretStorage 3.3.1 Adding SecretStorage 3.3.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for jeepney==0.7.1 Best match: jeepney 0.7.1 Adding jeepney 0.7.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for beautifulsoup4==4.10.0 Best match: beautifulsoup4 4.10.0 Adding beautifulsoup4 4.10.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for geographiclib==1.52 Best match: geographiclib 1.52 Adding geographiclib 1.52 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pyproj==3.2.1 Best match: pyproj 3.2.1 Adding pyproj 3.2.1 to easy-install.pth file Installing pyproj script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for Shapely==1.8.0 Best match: Shapely 1.8.0 Adding Shapely 1.8.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for sklearn==0.0 Best match: sklearn 0.0 Adding sklearn 0.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for scipy==1.7.3 Best match: scipy 1.7.3 Adding scipy 1.7.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for zipp==3.6.0 Best match: zipp 3.6.0 Adding zipp 3.6.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for smmap==5.0.0 Best match: smmap 5.0.0 Adding smmap 5.0.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for MarkupSafe==2.0.1 Best match: MarkupSafe 2.0.1 Adding MarkupSafe 2.0.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for future==0.18.2 Best match: future 0.18.2 Adding future 0.18.2 to easy-install.pth file Installing futurize script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing pasteurize script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for xdg==5.1.1 Best match: xdg 5.1.1 Adding xdg 5.1.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pytz==2021.3 Best match: pytz 2021.3 Adding pytz 2021.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pytest==6.2.5 Best match: pytest 6.2.5 Adding pytest 6.2.5 to easy-install.pth file Installing py.test script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing pytest script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for cffi==1.15.0 Best match: cffi 1.15.0 Adding cffi 1.15.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for cached-property==1.5.2 Best match: cached-property 1.5.2 Adding cached-property 1.5.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for humanfriendly==10.0 Best match: humanfriendly 10.0 Adding humanfriendly 10.0 to easy-install.pth file Installing humanfriendly script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for docopt==0.6.2 Best match: docopt 0.6.2 Adding docopt 0.6.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for yarg==0.1.9 Best match: yarg 0.1.9 Adding yarg 0.1.9 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for cryptography==36.0.1 Best match: cryptography 36.0.1 Adding cryptography 36.0.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for soupsieve==2.3.1 Best match: soupsieve 2.3.1 Adding soupsieve 2.3.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for scikit-learn==1.0.1 Best match: scikit-learn 1.0.1 Adding scikit-learn 1.0.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for iniconfig==1.1.1 Best match: iniconfig 1.1.1 Adding iniconfig 1.1.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for py==1.11.0 Best match: py 1.11.0 Adding py 1.11.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for toml==0.10.2 Best match: toml 0.10.2 Adding toml 0.10.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pycparser==2.21 Best match: pycparser 2.21 Adding pycparser 2.21 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for threadpoolctl==3.0.0 Best match: threadpoolctl 3.0.0 Adding threadpoolctl 3.0.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for joblib==1.1.0 Best match: joblib 1.1.0 Adding joblib 1.1.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Finished processing dependencies for emodpy-malaria==1.0.3 [rtd-command-info] start-time: 2021-12-18T16:06:13.418591Z, end-time: 2021-12-18T16:06:13.488302Z, duration: 0, exit-code: 0 cat docs/conf.py # -*- coding: utf-8 -*- # # Sphinx Demo docs build configuration file, created by # sphinx-quickstart on Fri Aug 26 16:52:16 2016. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. # # All configuration values have a default; values that are commented out # serve to show the default. # If extensions (or modules to document with autodoc) are in another directory, # add these directories to sys.path here. If the directory is relative to the # docs root, use os.path.abspath to make it absolute, like shown here. # import os import subprocess import sys import sphinx_rtd_theme import configparser from datetime import datetime from urllib.request import urlretrieve if sys.platform in ["linux", "darwin"]: subprocess.check_output(["make", "generate-api"], cwd=os.path.dirname(os.path.abspath(__file__))) else: subprocess.check_output(["make.bat", "generate-api"], cwd=os.path.dirname(os.path.abspath(__file__))) # -- General configuration ------------------------------------------------ tags.add('emodpymalaria') # If your docs needs a minimal Sphinx version, state it here. # # needs_sphinx = '1.0' # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [ 'sphinx.ext.mathjax', 'sphinx.ext.githubpages', 'sphinx.ext.autodoc', 'sphinxcontrib.napoleon', 'sphinx.ext.todo', 'plantweb.directive', 'sphinxcontrib.programoutput', 'sphinx_copybutton', 'sphinx.ext.intersphinx', 'sphinxext.remoteliteralinclude' ] plantuml = 'plantweb' autodoc_default_options = { 'member-order': 'bysource', 'members': None, 'exclude-members': '__all__' } autodoc_mock_imports = [] napoleon_google_docstring = True # napoleon_numpy_docstring = True # Add any paths that contain templates here, relative to this directory. templates_path = ['_templates'] # The suffix(es) of source filenames. # You can specify multiple suffix as a list of string: # # source_suffix = ['.rst', '.md'] source_suffix = '.rst' # The encoding of source files. # # source_encoding = 'utf-8-sig' # The master toctree document. master_doc = 'index' # General information about the project. project = u'emodpy-malaria' copyright = f'1999 - {datetime.today().year}, Bill & Melinda Gates Foundation. All rights reserved.' author = u'Institute for Disease Modeling' # The version info for the project you're documenting, acts as replacement for # |version| and |release|, also used in various other places throughout the # built documents. # # The short X.Y version. #current_path = os.path.dirname(__file__) #version_path = os.path.join(current_path, '..', '.bumpversion.cfg') #config = configparser.ConfigParser() #config.read(version_path) #version = config['bumpversion']['current_version'] # The full version, including alpha/beta/rc tags. # release = u'1.0' # The language for content autogenerated by Sphinx. Refer to docs # for a list of supported languages. # # This is also used if you do content translation via gettext catalogs. # Usually you set "language" from the command line for these cases. language = None # There are two options for replacing |today|: either, you set today to some # non-false value, then it is used: # # today = '' # # Else, today_fmt is used as the format for a strftime call. # # today_fmt = '%B %d, %Y' # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. # This patterns also effect to html_static_path and html_extra_path exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store'] # The reST default role (used for this markup: `text`) to use for all # documents. # # default_role = None # If true, '()' will be appended to :func: etc. cross-reference text. # # add_function_parentheses = True # If true, the current module name will be prepended to all description # unit titles (such as .. function::). # # add_module_names = True # If true, sectionauthor and moduleauthor directives will be shown in the # output. They are ignored by default. # # show_authors = False # The name of the Pygments (syntax highlighting) style to use. pygments_style = 'sphinx' # A list of ignored prefixes for module index sorting. # modindex_common_prefix = [] # If true, keep warnings as "system message" paragraphs in the built documents. # keep_warnings = False # If true, `todo` and `todoList` produce output, else they produce nothing. todo_include_todos = False # RST epilog is added to the end of every topic. Useful for replace # directives to use across the docset. rst_epilog = "\n.. include:: /variables.txt" # -- Options for HTML output ---------------------------------------------- # The theme to use for HTML and HTML Help pages. See the docs for # a list of builtin themes. # html_theme = 'sphinx_rtd_theme' # Theme options are theme-specific and customize the look and feel of a theme # further. For a list of options available for each theme, see the # docs. # # # html_theme_options = { # } # Add any paths that contain custom themes here, relative to this directory. html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] # The name for this set of Sphinx documents. # " v docs" by default. # # html_title = u'Sphinx Demo v1.0' # A shorter title for the navigation bar. Default is the same as html_title. # # html_short_title = None # The name of an image file (relative to this directory) to place at the top # of the sidebar. # html_logo = "images/IDM_white.png" # The name of an image file (relative to this directory) to use as a favicon of # the docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32 # pixels large. # html_favicon = "images/favicon.ico" # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css". html_static_path = ['_static'] html_context = { 'css_files': [ '_static/theme_overrides.css', '_static/copy_button.css' ] } html_js_files = ['show_block_by_os.js'] # Add any extra paths that contain custom files (such as robots.txt or # .htaccess) here, relative to this directory. These files are copied # directly to the root of the docs. # # html_extra_path = [] # If not None, a 'Last updated on:' timestamp is inserted at every page # bottom, using the given strftime format. # The empty string is equivalent to '%b %d, %Y'. # # html_last_updated_fmt = None # If true, SmartyPants will be used to convert quotes and dashes to # typographically correct entities. # # html_use_smartypants = True # Custom sidebar templates, maps document names to template names. # # html_sidebars = {} # Additional templates that should be rendered to pages, maps page names to # template names. # # html_additional_pages = {} # If false, no module index is generated. # # html_domain_indices = True # If false, no index is generated. # # html_use_index = True # If true, the index is split into individual pages for each letter. # # html_split_index = False # If true, links to the reST sources are added to the pages. # html_show_sourcelink = False # If true, "Created using Sphinx" is shown in the HTML footer. Default is True. # html_show_sphinx = False # If true, "(C) Copyright ..." is shown in the HTML footer. Default is True. # # html_show_copyright = True # If true, an OpenSearch description file will be output, and all pages will # contain a tag referring to it. The value of this option must be the # base URL from which the finished HTML is served. # html_use_opensearch = 'www.idmod.org/docs/' # This is the file name suffix for HTML files (e.g. ".xhtml"). # html_file_suffix = None # Language to be used for generating the HTML full-text search index. # Sphinx supports the following languages: # 'da', 'de', 'en', 'es', 'fi', 'fr', 'hu', 'it', 'ja' # 'nl', 'no', 'pt', 'ro', 'ru', 'sv', 'tr', 'zh' # # html_search_language = 'en' # A dictionary with options for the search language support, empty by default. # 'ja' uses this config value. # 'zh' user can custom change `jieba` dictionary path. # # html_search_options = {'type': 'default'} # The name of a javascript file (relative to the configuration directory) that # implements a search results scorer. If empty, the default will be used. # # html_search_scorer = 'scorer.js' # Output file base name for HTML help builder. htmlhelp_basename = 'emodpy-malaria' # -- Options for LaTeX output --------------------------------------------- latex_elements = { # The paper size ('letterpaper' or 'a4paper'). # # 'papersize': 'letterpaper', # The font size ('10pt', '11pt' or '12pt'). # # 'pointsize': '10pt', # Additional stuff for the LaTeX preamble. # # 'preamble': '', # Latex figure (float) alignment # # 'figure_align': 'htbp', } # Grouping the document tree into LaTeX files. List of tuples # (source start file, target name, title, # author, documentclass [howto, manual, or own class]). latex_documents = [ (master_doc, 'emodpy-malaria-docs.tex', u'emodpy-malaria', u'Institute for Disease Modeling', 'manual'), ] # The name of an image file (relative to this directory) to place at the top of # the title page. # # latex_logo = None # For "manual" documents, if this is true, then toplevel headings are parts, # not chapters. # # latex_use_parts = False # If true, show page references after internal links. # # latex_show_pagerefs = False # If true, show URL addresses after external links. # # latex_show_urls = False # Documents to append as an appendix to all manuals. # # latex_appendices = [] # It false, will not define \strong, \code, itleref, \crossref ... but only # \sphinxstrong, ..., \sphinxtitleref, ... To help avoid clash with user added # packages. # # latex_keep_old_macro_names = True # If false, no module index is generated. # # latex_domain_indices = True # -- Options for manual page output --------------------------------------- # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ (master_doc, 'emodpy-malaria-docs', u'emodpy-malaria', [author], 1) ] # If true, show URL addresses after external links. # man_show_urls = True # -- Options for Texinfo output ------------------------------------------- # Grouping the document tree into Texinfo files. List of tuples # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ (master_doc, 'emodpy-malaria-docs', u'emodpy-malaria', author, 'Institute for Disease Modeling', 'How to use emodpy for malaria simulations.', 'Miscellaneous'), ] # Documents to append as an appendix to all manuals. # # texinfo_appendices = [] # If false, no module index is generated. # # texinfo_domain_indices = True # How to display URL addresses: 'footnote', 'no', or 'inline'. # # texinfo_show_urls = 'footnote' # If true, do not generate a @detailmenu in the "Top" node's menu. # # texinfo_no_detailmenu = False # Example configuration for intersphinx: refer to the Python standard library. intersphinx_mapping = {'python': ('https://docs.python.org/3', None), 'emod_api': ('https://docs.idmod.org/projects/emod-api/en/latest/', None), 'emodpy': ('https://docs.idmod.org/projects/emodpy/en/latest/', None), 'idmtools': ('https://docs.idmod.org/projects/idmtools/en/latest/', None), 'emod-malaria': ('https://docs.idmod.org/projects/emod-malaria/en/latest/', None), 'pycomps': ('https://docs.idmod.org/projects/pycomps/en/latest/', None) } ########################################################################### # auto-created readthedocs.org specific configuration # ########################################################################### # # The following code was added during an automated build on readthedocs.org # It is auto created and injected for every build. The result is based on the # conf.py.tmpl file found in the readthedocs.org codebase: # https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl # # Note: this file shouldn't rely on extra dependencies. import importlib import sys import os.path # Borrowed from six. PY3 = sys.version_info[0] == 3 string_types = str if PY3 else basestring from sphinx import version_info # Get suffix for proper linking to GitHub # This is deprecated in Sphinx 1.3+, # as each page can have its own suffix if globals().get('source_suffix', False): if isinstance(source_suffix, string_types): SUFFIX = source_suffix elif isinstance(source_suffix, (list, tuple)): # Sphinx >= 1.3 supports list/tuple to define multiple suffixes SUFFIX = source_suffix[0] elif isinstance(source_suffix, dict): # Sphinx >= 1.8 supports a mapping dictionary for multiple suffixes SUFFIX = list(source_suffix.keys())[0] # make a ``list()`` for py2/py3 compatibility else: # default to .rst SUFFIX = '.rst' else: SUFFIX = '.rst' # Add RTD Static Path. Add to the end because it overwrites previous files. if not 'html_static_path' in globals(): html_static_path = [] if os.path.exists('_static'): html_static_path.append('_static') # Add RTD Theme only if they aren't overriding it already using_rtd_theme = ( ( 'html_theme' in globals() and html_theme in ['default'] and # Allow people to bail with a hack of having an html_style 'html_style' not in globals() ) or 'html_theme' not in globals() ) if using_rtd_theme: theme = importlib.import_module('sphinx_rtd_theme') html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(theme.get_html_theme_path()) else: html_theme_path = [theme.get_html_theme_path()] if globals().get('websupport2_base_url', False): websupport2_base_url = 'https://readthedocs.com/websupport' websupport2_static_url = 'https://assets.readthedocs.com/' #Add project information to the template context. context = { 'using_theme': using_rtd_theme, 'html_theme': html_theme, 'current_version': "latest", 'version_slug': "latest", 'MEDIA_URL': "https://media.readthedocs.com/media/", 'STATIC_URL': "https://assets.readthedocs.com/", 'PRODUCTION_DOMAIN': "readthedocs.com", 'versions': [ ("latest", "/en/latest/"), ("stable", "/en/stable/"), ("v1.0.2", "/en/v1.0.2/"), ("v0.0.61", "/en/v0.0.61/"), ("v0.0.50", "/en/v0.0.50/"), ("0.0.50", "/en/0.0.50/"), ("v0.0.48", "/en/v0.0.48/"), ("v0.0.45", "/en/v0.0.45/"), ("v0.0.44", "/en/v0.0.44/"), ("v0.0.29", "/en/v0.0.29/"), ("v0.0.18", "/en/v0.0.18/"), ], 'downloads': [ ("pdf", "//docs.idmod.org/_/downloads/emodpy-malaria/en/latest/pdf/"), ("html", "//docs.idmod.org/_/downloads/emodpy-malaria/en/latest/htmlzip/"), ], 'subprojects': [ ], 'slug': 'institute-for-disease-modeling-emodpy-malaria', 'name': u'emodpy-malaria', 'rtd_language': u'en', 'programming_language': u'words', 'canonical_url': 'https://docs.idmod.org/projects/emodpy-malaria/en/latest/', 'analytics_code': 'UA-87656833-3', 'single_version': False, 'conf_py_path': '/docs/', 'api_host': 'https://readthedocs.com', 'github_user': 'InstituteforDiseaseModeling', 'proxied_api_host': '/_', 'github_repo': 'emodpy-malaria', 'github_version': 'main', 'display_github': True, 'bitbucket_user': 'None', 'bitbucket_repo': 'None', 'bitbucket_version': 'main', 'display_bitbucket': False, 'gitlab_user': 'None', 'gitlab_repo': 'None', 'gitlab_version': 'main', 'display_gitlab': False, 'READTHEDOCS': True, 'using_theme': (html_theme == "default"), 'new_theme': (html_theme == "sphinx_rtd_theme"), 'source_suffix': SUFFIX, 'ad_free': False, 'docsearch_disabled': False, 'user_analytics_code': 'UA-87656833-3', 'global_analytics_code': 'UA-17997319-2', 'commit': '86546256', } # For sphinx >=1.8 we can use html_baseurl to set the canonical URL. # https://www.sphinx-doc.org/en/master/usage/configuration.html#confval-html_baseurl if version_info >= (1, 8): if not globals().get('html_baseurl'): html_baseurl = context['canonical_url'] context['canonical_url'] = None if 'html_context' in globals(): html_context.update(context) else: html_context = context # Add custom RTD extension if 'extensions' in globals(): # Insert at the beginning because it can interfere # with other extensions. # See https://github.com/rtfd/readthedocs.org/pull/4054 extensions.insert(0, "readthedocs_ext.readthedocs") else: extensions = ["readthedocs_ext.readthedocs"] # Add External version warning banner to the external version documentation if 'branch' == 'external': extensions.insert(1, "readthedocs_ext.external_version_warning") readthedocs_vcs_url = 'None' readthedocs_build_url = 'https://readthedocs.com/projects/institute-for-disease-modeling-emodpy-malaria/builds/804653/' project_language = 'en' # User's Sphinx configurations language_user = globals().get('language', None) latex_engine_user = globals().get('latex_engine', None) latex_elements_user = globals().get('latex_elements', None) # Remove this once xindy gets installed in Docker image and XINDYOPS # env variable is supported # https://github.com/rtfd/readthedocs-docker-images/pull/98 latex_use_xindy = False chinese = any([ language_user in ('zh_CN', 'zh_TW'), project_language in ('zh_CN', 'zh_TW'), ]) japanese = any([ language_user == 'ja', project_language == 'ja', ]) if chinese: latex_engine = latex_engine_user or 'xelatex' latex_elements_rtd = { 'preamble': '\\usepackage[UTF8]{ctex}\n', } latex_elements = latex_elements_user or latex_elements_rtd elif japanese: latex_engine = latex_engine_user or 'platex' # Make sure our build directory is always excluded exclude_patterns = globals().get('exclude_patterns', []) exclude_patterns.extend(['_build']) [rtd-command-info] start-time: 2021-12-18T16:06:13.600221Z, end-time: 2021-12-18T16:06:20.193817Z, duration: 6, exit-code: 0 python -m sphinx -T -E -W --keep-going -b html -d _build/doctrees -D language=en . _build/html Running Sphinx v3.3.1 rm: cannot remove 'modules.rst': No such file or directory make: [generate-api] Error 1 (ignored) rm: cannot remove 'emodpy_malaria_index.rst': No such file or directory make: [generate-api] Error 1 (ignored) loading translations [en]... done making output directory... done loading intersphinx inventory from https://docs.python.org/3/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/emod-api/en/latest/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/emodpy/en/latest/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/idmtools/en/latest/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/emod-malaria/en/latest/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/pycomps/en/latest/objects.inv... building [mo]: targets for 0 po files that are out of date building [html]: targets for 31 source files that are out of date updating environment: [new config] 31 added, 0 changed, 0 removed reading sources... [ 3%] emodpy_malaria reading sources... [ 6%] emodpy_malaria.demographics reading sources... [ 9%] emodpy_malaria.demographics.MalariaDemographics reading sources... [ 12%] emodpy_malaria.interventions reading sources... [ 16%] emodpy_malaria.interventions.bednet reading sources... [ 19%] emodpy_malaria.interventions.common reading sources... [ 22%] emodpy_malaria.interventions.community_health_worker reading sources... [ 25%] emodpy_malaria.interventions.diag_survey reading sources... [ 29%] emodpy_malaria.interventions.drug reading sources... [ 32%] emodpy_malaria.interventions.drug_campaign reading sources... [ 35%] emodpy_malaria.interventions.inputeir reading sources... [ 38%] emodpy_malaria.interventions.irs reading sources... [ 41%] emodpy_malaria.interventions.ivermectin reading sources... [ 45%] emodpy_malaria.interventions.mosquitorelease reading sources... [ 48%] emodpy_malaria.interventions.outbreak reading sources... [ 51%] emodpy_malaria.interventions.outdoorrestkill reading sources... [ 54%] emodpy_malaria.interventions.spacespraying reading sources... [ 58%] emodpy_malaria.interventions.sugartrap reading sources... [ 61%] emodpy_malaria.interventions.treatment_seeking reading sources... [ 64%] emodpy_malaria.interventions.udbednet reading sources... [ 67%] emodpy_malaria.interventions.vaccine reading sources... [ 70%] emodpy_malaria.malaria_config reading sources... [ 74%] emodpy_malaria.malaria_vector_species_params reading sources... [ 77%] emodpy_malaria.reporters reading sources... [ 80%] emodpy_malaria.reporters.builtin /!\ WARNING: File 'idmtools.ini' Not Found! For details on how to configure idmtools, see https://docs.idmod.org/projects/idmtools/en/v1.6.4/configuration.html for details on how to configure idmtools. reading sources... [ 83%] emodpy_malaria.vector_config reading sources... [ 87%] emodpy_malaria_index reading sources... [ 90%] faq reading sources... [ 93%] index reading sources... [ 96%] installation reading sources... [100%] installation-basic looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 3%] emodpy_malaria writing output... [ 6%] emodpy_malaria.demographics writing output... [ 9%] emodpy_malaria.demographics.MalariaDemographics writing output... [ 12%] emodpy_malaria.interventions writing output... [ 16%] emodpy_malaria.interventions.bednet writing output... [ 19%] emodpy_malaria.interventions.common writing output... [ 22%] emodpy_malaria.interventions.community_health_worker writing output... [ 25%] emodpy_malaria.interventions.diag_survey writing output... [ 29%] emodpy_malaria.interventions.drug writing output... [ 32%] emodpy_malaria.interventions.drug_campaign writing output... [ 35%] emodpy_malaria.interventions.inputeir writing output... [ 38%] emodpy_malaria.interventions.irs writing output... [ 41%] emodpy_malaria.interventions.ivermectin writing output... [ 45%] emodpy_malaria.interventions.mosquitorelease writing output... [ 48%] emodpy_malaria.interventions.outbreak writing output... [ 51%] emodpy_malaria.interventions.outdoorrestkill writing output... [ 54%] emodpy_malaria.interventions.spacespraying writing output... [ 58%] emodpy_malaria.interventions.sugartrap writing output... [ 61%] emodpy_malaria.interventions.treatment_seeking writing output... [ 64%] emodpy_malaria.interventions.udbednet writing output... [ 67%] emodpy_malaria.interventions.vaccine writing output... [ 70%] emodpy_malaria.malaria_config writing output... [ 74%] emodpy_malaria.malaria_vector_species_params writing output... [ 77%] emodpy_malaria.reporters writing output... [ 80%] emodpy_malaria.reporters.builtin writing output... [ 83%] emodpy_malaria.vector_config writing output... [ 87%] emodpy_malaria_index writing output... [ 90%] faq writing output... [ 93%] index writing output... [ 96%] installation writing output... [100%] installation-basic generating indices... genindex py-modindex done writing additional pages... search opensearch done copying static files... done copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done build succeeded. The HTML pages are in _build/html. Updating searchtools for Read the Docs search... [rtd-command-info] start-time: 2021-12-18T16:06:20.349344Z, end-time: 2021-12-18T16:06:22.735161Z, duration: 2, exit-code: 0 python -m sphinx -T -W --keep-going -b readthedocssinglehtmllocalmedia -d _build/doctrees -D language=en . _build/localmedia Running Sphinx v3.3.1 rm: cannot remove 'modules.rst': No such file or directory make: [generate-api] Error 1 (ignored) loading translations [en]... done making output directory... done loading pickled environment... done building [mo]: targets for 0 po files that are out of date building [readthedocssinglehtmllocalmedia]: all documents updating environment: 0 added, 1 changed, 0 removed reading sources... [100%] emodpy_malaria_index looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done assembling single document... installation installation-basic faq emodpy_malaria_index emodpy_malaria emodpy_malaria.demographics emodpy_malaria.demographics.MalariaDemographics emodpy_malaria.interventions emodpy_malaria.interventions.bednet emodpy_malaria.interventions.common emodpy_malaria.interventions.community_health_worker emodpy_malaria.interventions.diag_survey emodpy_malaria.interventions.drug emodpy_malaria.interventions.drug_campaign emodpy_malaria.interventions.inputeir emodpy_malaria.interventions.irs emodpy_malaria.interventions.ivermectin emodpy_malaria.interventions.mosquitorelease emodpy_malaria.interventions.outbreak emodpy_malaria.interventions.outdoorrestkill emodpy_malaria.interventions.spacespraying emodpy_malaria.interventions.sugartrap emodpy_malaria.interventions.treatment_seeking emodpy_malaria.interventions.udbednet emodpy_malaria.interventions.vaccine emodpy_malaria.reporters emodpy_malaria.reporters.builtin emodpy_malaria.malaria_config emodpy_malaria.malaria_vector_species_params emodpy_malaria.vector_config done writing... done writing additional files... opensearchdone copying static files... done copying extra files... done dumping object inventory... done build succeeded. The HTML page is in _build/localmedia. Updating searchtools for Read the Docs search... [rtd-command-info] start-time: 2021-12-18T16:06:22.879474Z, end-time: 2021-12-18T16:06:25.236282Z, duration: 2, exit-code: 0 python -m sphinx -b latex -D language=en -d _build/doctrees . _build/latex Running Sphinx v3.3.1 rm: cannot remove 'modules.rst': No such file or directory make: [generate-api] Error 1 (ignored) loading translations [en]... done making output directory... done loading pickled environment... done building [mo]: targets for 0 po files that are out of date building [latex]: all documents updating environment: 0 added, 1 changed, 0 removed reading sources... [100%] emodpy_malaria_index looking for now-outdated files... none found pickling environment... done checking consistency... done processing emodpy-malaria-docs.tex... index installation installation-basic faq emodpy_malaria_index emodpy_malaria emodpy_malaria.demographics emodpy_malaria.demographics.MalariaDemographics emodpy_malaria.interventions emodpy_malaria.interventions.bednet emodpy_malaria.interventions.common emodpy_malaria.interventions.community_health_worker emodpy_malaria.interventions.diag_survey emodpy_malaria.interventions.drug emodpy_malaria.interventions.drug_campaign emodpy_malaria.interventions.inputeir emodpy_malaria.interventions.irs emodpy_malaria.interventions.ivermectin emodpy_malaria.interventions.mosquitorelease emodpy_malaria.interventions.outbreak emodpy_malaria.interventions.outdoorrestkill emodpy_malaria.interventions.spacespraying emodpy_malaria.interventions.sugartrap emodpy_malaria.interventions.treatment_seeking emodpy_malaria.interventions.udbednet emodpy_malaria.interventions.vaccine emodpy_malaria.reporters emodpy_malaria.reporters.builtin emodpy_malaria.malaria_config emodpy_malaria.malaria_vector_species_params emodpy_malaria.vector_config resolving references... done writing... done copying TeX support files... copying TeX support files... done build succeeded. The LaTeX files are in _build/latex. Run 'make' in that directory to run these through (pdf)latex (use `make latexpdf' here to do that automatically). WARNING: Missing searchtools: /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/checkouts/latest/docs/_build/latex/_static/searchtools.js [rtd-command-info] start-time: 2021-12-18T16:06:25.465373Z, end-time: 2021-12-18T16:06:25.539691Z, duration: 0, exit-code: 0 cat latexmkrc $latex = 'latex ' . $ENV{'LATEXOPTS'} . ' %O %S'; $pdflatex = 'pdflatex ' . $ENV{'LATEXOPTS'} . ' %O %S'; $lualatex = 'lualatex ' . $ENV{'LATEXOPTS'} . ' %O %S'; $xelatex = 'xelatex --no-pdf ' . $ENV{'LATEXOPTS'} . ' %O %S'; $makeindex = 'makeindex -s python.ist %O -o %D %S'; add_cus_dep( "glo", "gls", 0, "makeglo" ); sub makeglo { return system( "makeindex -s gglo.ist -o '$_[0].gls' '$_[0].glo'" ); } [rtd-command-info] start-time: 2021-12-18T16:06:25.647257Z, end-time: 2021-12-18T16:06:28.570207Z, duration: 2, exit-code: 0 latexmk -r latexmkrc -pdf -f -dvi- -ps- -jobname=institute-for-disease-modeling-emodpy-malaria -interaction=nonstopmode Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 1, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 2, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 3, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 4, chunk 1. Subroutine makeglo redefined at (eval 11) line 7, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 1, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 2, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 3, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 4, chunk 1. Latexmk: This is Latexmk, John Collins, 1 January 2015, version: 4.41. File::Glob::glob() will disappear in perl 5.30. Use File::Glob::bsd_glob() instead. at /usr/bin/latexmk line 7482. Rule 'pdflatex': Rules & subrules not known to be previously run: pdflatex Rule 'pdflatex': The following rules & subrules became out-of-date: 'pdflatex' ------------ Run number 1 of rule 'pdflatex' ------------ ------------ Running 'pdflatex -interaction=nonstopmode -recorder --jobname="institute-for-disease-modeling-emodpy-malaria" "emodpy-malaria-docs.tex"' ------------ Latexmk: applying rule 'pdflatex'... This is pdfTeX, Version 3.14159265-2.6-1.40.18 (TeX Live 2017/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./emodpy-malaria-docs.tex LaTeX2e <2017-04-15> Babel <3.18> and hyphenation patterns for 84 language(s) loaded. 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Underfull \hbox (badness 10000) in paragraph at lines 709--709 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block-ing_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 709--709 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block- Underfull \hbox (badness 10000) in paragraph at lines 709--709 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 709--709 \T1/ptm/m/it/10 killing_predecay_duration: Underfull \hbox (badness 10000) in paragraph at lines 709--709 [][]\T1/ptm/m/it/10 int[][] = 1460\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 709--709 \T1/ptm/m/it/10 pelling_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 709--709 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 709--709 \T1/ptm/m/it/10 pelling_predecay_duration: Underfull \hbox (badness 10000) in paragraph at lines 709--709 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us- Underfull \hbox (badness 10000) in paragraph at lines 709--709 \T1/ptm/m/it/10 us-age_predecay_duration: [11] Underfull \hbox (badness 10000) in paragraph at lines 734--734 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block-ing_pre decay_duration: Underfull \hbox (badness 10000) in paragraph at lines 734--734 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_decay _rate: [][]float[][] Underfull \hbox (badness 10000) in paragraph at lines 734--734 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_predecay_duration: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 734--734 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-pelling_decay_rate: [] []float[][] = Underfull \hbox (badness 10000) in paragraph at lines 734--734 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-pelling_predecay_duration: [][]int[][] = Underfull \hbox (badness 5091) in paragraph at lines 734--734 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us-age_decay_rate: [][]floa t[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us- [12] Underfull \hbox (badness 10000) in paragraph at lines 811--811 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age=1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 811--811 \T1/ptm/m/it/10 block-ing_eff=1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_eff=1\T 1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 854--854 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , [13] LaTeX Warning: Hyper reference `emodpy_malaria.interventions.bednet:emodpy_mala ria.interventions.bednet.BednetIntervention' on page 14 undefined on input line 880. 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[][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 948--948 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 954--954 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start: [][]int[][] = 0\T 1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Underfull \hbox (badness 10000) in paragraph at lines 954--954 [][]\T1/ptm/m/it/10 emod_api.schema_to_class.ReadOnlyDict[][] Underfull \hbox (badness 7308) in paragraph at lines 954--954 [][]\T1/ptm/m/it/10 str[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_propert y_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 954--954 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_propert y_restrictions: Underfull \hbox (badness 6477) in paragraph at lines 954--954 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-gered_ campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 967--971 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"coverage":1,"min": 1, "max": 10}, { "coverage":1, Underfull \hbox (badness 10000) in paragraph at lines 967--971 \T1/pcr/m/n/10 "min": 11, "max": 50},{ "coverage":0.5, "birth":"birth", [15] Underfull \hbox (badness 10000) in paragraph at lines 1029--1039 \T1/ptm/m/n/10 camp = DTK-Con-fig-Builder.from_defaults(sim_example) cov-er-age _by_ages = [{^^Pcov-er-age^^Q: 1, Underfull \hbox (badness 10000) in paragraph at lines 1029--1039 \T1/ptm/m/n/10 ^^Pmin^^Q: 1, ^^Pmax^^Q: 10}, {^^Pcov-er-age^^Q: 0.75, ^^Pmin^^Q : 11, ^^Pmax^^Q: 60}] add_ITN(camp, Underfull \hbox (badness 10000) in paragraph at lines 1029--1039 \T1/ptm/m/n/10 start=1, cov-er-age_by_ages, nodeIDs=[2, 5, 7, 21], node_propert y_restrictions=[{^^PPlace^^Q: ^^PUr- Underfull \hbox (badness 10000) in paragraph at lines 1029--1039 \T1/ptm/m/n/10 ban^^Q}], ind_property_restrictions=[{^^PBiting_Risk^^Q: ^^PHigh ^^Q], trig-gered_campaign_delay=14, trig- Underfull \hbox (badness 10000) in paragraph at lines 1050--1050 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 Mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1050--1050 \T1/ptm/m/it/10 ment_Sensitivity\T1/ptm/m/n/10 , \T1/ptm/m/it/10 De-tec- Underfull \hbox (badness 10000) in paragraph at lines 1050--1050 \T1/ptm/m/it/10 tion_Threshold\T1/ptm/m/n/10 , \T1/ptm/m/it/10 Di-ag-nos- [16] Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 trig-ger\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 de-lay\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 in-ter- Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 ven-tion\T1/ptm/m/n/10 , Overfull \hbox (36.58427pt too wide) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 ip_targeting=None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 cov-er- Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 age=1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 tar- Overfull \hbox (22.85468pt too wide) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 get_age_min=0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 tar- Overfull \hbox (45.51472pt too wide) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 get_age_max=125.0\T1/pcr/m/n/10 ) [17] Overfull \hbox (83.18481pt too wide) in paragraph at lines 1161--1161 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (82.35448pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 start_day: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , Overfull \hbox (59.02464pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 trig- Overfull \hbox (117.814pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ger_condition_list: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (54.01491pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 de- Overfull \hbox (56.79494pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 mo- Overfull \hbox (116.73457pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (56.24501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , Overfull \hbox (80.6847pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 node_ids: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (146.53346pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ind_property_restrictions: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (153.19351pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 node_property_restrictions: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tar- Overfull \hbox (95.93463pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 get_age_min: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tar- Overfull \hbox (97.59468pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 get_age_max: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (58.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tar- Overfull \hbox (89.3646pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 get_gender: Overfull \hbox (51.80469pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (59.69456pt too wide) in paragraph at lines 1161--1161 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Overfull \hbox (55.13475pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ini- Overfull \hbox (92.9145pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tial_amount: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 6\T1/ptm/m/n/10 , Overfull \hbox (128.46431pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 amount_in_shipment: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (145.67392pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 days_between_shipments: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 7\T1/ptm/m/n/10 , Overfull \hbox (54.57497pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 du- Overfull \hbox (53.31496pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ra- Overfull \hbox (60.13475pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tion: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (97.43495pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 3.40282e+38\T1/ptm/m/n/10 , Overfull \hbox (52.35486pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 in- Overfull \hbox (55.48474pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ter- Overfull \hbox (58.45485pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ven- Overfull \hbox (89.57469pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tion_config: Overfull \hbox (55.68495pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 any Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (147.144pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 max_distributed_per_day: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (86.5846pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 max_stock: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (61.80467pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 wait- Overfull \hbox (88.46458pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ing_period: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (52.24501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 0\T1/pcr/m/n/10 ) [18] Overfull \vbox (355.66753pt too high) has occurred while \output is active [19] [20] Overfull \hbox (31.21352pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 get: [][]ob-ject[][] Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 5203) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag-nos- Overfull \hbox (63.55446pt too wide) in paragraph at lines 1250--1250 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 tic_threshold: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 float[][] = 40\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 mea-sure- Overfull \hbox (1.01384pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 event_name: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Di-ag- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 nos-tic Sur-vey\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (27.58405pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 tive_diagnosis_configs: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 neg-a- Overfull \hbox (27.58405pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 tive_diagnosis_configs: Overfull \hbox (6.95406pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ceived_test_event: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ceived_Test\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 IP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 NP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ing_properties: Overfull \hbox (9.814pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ing_duration: Overfull \hbox (29.97432pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (47.68343pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 check_eligibility_at_trigger: Overfull \hbox (9.71407pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 pire_recent_drugs: LaTeX Warning: Hyper reference `emodpy_malaria.interventions.common:emodpy_mala ria.interventions.common.MalariaDiagnostic' on page 21 undefined on input line 1253. [21] Underfull \hbox (badness 10000) in paragraph at lines 1283--1286 []\T1/pcr/b/n/10 diagnostic_type \T1/ptm/m/n/10 ^^U Type of malaria di-ag-nos-t ic used. De-fault is Underfull \hbox (badness 10000) in paragraph at lines 1325--1328 []\T1/ptm/m/n/10 In ga-me-to-cytes/microliter, use mea-sure- LaTeX Warning: Hyper reference `emodpy_malaria.interventions.common:emodpy_mala ria.interventions.common.MalariaDiagnostic' on page 22 undefined on input line 1349. Underfull \hbox (badness 10000) in paragraph at lines 1348--1350 []\T1/pcr/b/n/10 measurement_sensitivity \T1/ptm/m/n/10 ^^U Set-ting for \T1/pt m/b/n/10 Mea-sure-ment_Sensitivity \T1/ptm/m/n/10 in [22] Underfull \hbox (badness 10000) in paragraph at lines 1371--1376 []\T1/pcr/b/n/10 IP_restrictions \T1/ptm/m/n/10 ^^U List of In-di-vid-u-al-Prop -erty key:value pairs that Underfull \hbox (badness 10000) in paragraph at lines 1371--1376 \T1/ptm/m/n/10 in-di-vid-u-als must have to re-ceive the di-ag-nos-tic in-ter-v en-tion. For Underfull \hbox (badness 10000) in paragraph at lines 1371--1376 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue 1"}, Underfull \hbox (badness 10000) in paragraph at lines 1378--1383 []\T1/pcr/b/n/10 NP_restrictions \T1/ptm/m/n/10 ^^U List of Node-Prop-erty key: value pairs Underfull \hbox (badness 10000) in paragraph at lines 1378--1383 \T1/ptm/m/n/10 that nodes must have to re-ceive the di-ag-nos-tic in-ter-ven-ti on. Underfull \hbox (badness 10000) in paragraph at lines 1378--1383 \T1/ptm/m/n/10 For ex-am-ple, \T1/pcr/m/n/10 [{"NodeProperty1":"PropertyValue1" }, Underfull \hbox (badness 10000) in paragraph at lines 1385--1389 []\T1/pcr/b/n/10 disqualifying_properties \T1/ptm/m/n/10 ^^U List of In-di-vid- u-al-Prop-erty Underfull \hbox (badness 10000) in paragraph at lines 1385--1389 \T1/ptm/m/n/10 key:value pairs that cause an in-ter-ven-tion to be aborted. For ex- Underfull \hbox (badness 10000) in paragraph at lines 1385--1389 \T1/ptm/m/n/10 am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue1"} , Underfull \hbox (badness 10000) in paragraph at lines 1408--1411 []\T1/pcr/b/n/10 expire_recent_drugs \T1/ptm/m/n/10 ^^U Adds \T1/pcr/m/n/10 [{" DrugStatus:None"}] \T1/ptm/m/n/10 to \T1/ptm/b/n/10 Prop- [23] Underfull \hbox (badness 10000) in paragraph at lines 1497--1497 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1497--1497 \T1/ptm/m/it/10 drug_code: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cam- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 paign_type: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 MDA\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6775) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: Overfull \hbox (19.21352pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 7344) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag- Overfull \hbox (51.55446pt too wide) in paragraph at lines 1528--1528 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 = 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 fmda_radius: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (6.22408pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 5667) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 balls: [][]int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 treat-ment_delay: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Overfull \hbox (17.97432pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 tar-get_group: Overfull \hbox (33.88365pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (33.19351pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (26.53346pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ing_properties: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ent_drug_configs: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 get_residents_only: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (35.68343pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 False\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Overfull \hbox (144.47322pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ing_drugs_event_name=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Received _Campaign_Drugs\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) [24] [25] [26] Underfull \hbox (badness 10000) in paragraph at lines 1679--1682 []\T1/pcr/b/n/10 ind_property_restrictions \T1/ptm/m/n/10 ^^U The set-ting for \T1/ptm/b/n/10 Prop- Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (57.71327pt too wide) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e-ti-tions: [][]int[ ][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 6348) in paragraph at lines 1724--1724 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][] list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (86.50304pt too wide) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 6032) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 ing_properties: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 trig-ger_condition_list: [][]list[][] = LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 27 undefined on input line 1726. [27] Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 7504) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 treat-ment_delay: [][]int[ ][] Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure-ment_sensitivity: Underfull \hbox (badness 6063) in paragraph at lines 1739--1739 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [ ][]list[][] Overfull \hbox (92.50304pt too wide) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 check_eligibility_at_trigger: LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 28 undefined on input line 1741. Underfull \hbox (badness 10000) in paragraph at lines 1740--1743 \T1/ptm/m/n/10 Add an MSAT (mass screen-ing and treat-ment) drug in-ter-ven-tio n to your cam-paign. See [28] Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 7221) in paragraph at lines 1754--1754 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [ ][]float[][] Underfull \hbox (badness 7595) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (92.50304pt too wide) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 29 undefined on input line 1756. Underfull \hbox (badness 7869) in paragraph at lines 1755--1758 \T1/ptm/m/n/10 Add an fMDA (fo-cal mass drug ad-min-is-tra-tion) drug in-ter-ve n-tion to your cam-paign. See Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 6141) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (75.71327pt too wide) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Overfull \hbox (9.55446pt too wide) in paragraph at lines 1769--1769 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (104.50304pt too wide) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 29 undefined on input line 1771. [29] Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (69.71327pt too wide) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 7613) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_covera ge: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS-TANCE_ONLY\ TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 node_ids: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (98.50304pt too wide) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 30 undefined on input line 1786. Underfull \hbox (badness 10000) in paragraph at lines 1799--1799 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ev ent_trigger: [30] Underfull \hbox (badness 5756) in paragraph at lines 1831--1831 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 daily_eir: [][]list[][] Underfull \hbox (badness 5091) in paragraph at lines 1865--1865 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][]l ist[][] = None\T1/ptm/m/n/10 , [31] Underfull \hbox (badness 10000) in paragraph at lines 1905--1905 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1905--1905 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , [32] Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Overfull \hbox (11.51352pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (38.20403pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 killing_box_duration_days: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (98.1333pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 killing_exponential_decay_constant_days: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 int[][] = 90\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (13.73363pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 pelling_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (40.42413pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 pelling_box_duration_days: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (100.35341pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 pelling_exponential_decay_constant_days: [33] Underfull \hbox (badness 10000) in paragraph at lines 2038--2038 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n /10 , Underfull \hbox (badness 10000) in paragraph at lines 2047--2047 []\T1/ptm/m/it/10 schema_path_container\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2047--2047 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2047--2047 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 re-leased_number: Underfull \hbox (badness 5954) in paragraph at lines 2090--2090 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 leased_fraction: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 leased_infectious: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 leased_species: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 re-leased_genome: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , [34] Underfull \hbox (badness 10000) in paragraph at lines 2110--2112 []\T1/pcr/b/n/10 released_infectious \T1/ptm/m/n/10 ^^U The frac-tion of vec-to rs re-leased that Underfull \hbox (badness 10000) in paragraph at lines 2110--2112 \T1/ptm/m/n/10 are to be in-fec-tious. One can only use this fea-ture when Overfull \hbox (16.27205pt too wide) in paragraph at lines 2110--2112 \T1/ptm/m/n/10 `Malaria_Model'!='MALARIA_MECHANISTIC_MODEL_WITH_PARASITE_GENETI CS' Underfull \hbox (badness 10000) in paragraph at lines 2136--2136 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (16.35448pt too wide) in paragraph at lines 2136--2136 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2136--2136 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 2136--2136 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2136--2136 \T1/ptm/m/it/10 file- Overfull \hbox (2.35487pt too wide) in paragraph at lines 2136--2136 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [35] Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Overfull \hbox (2.73457pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (14.36418pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (52.97314pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (32.53346pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (39.19351pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 5359) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ig- Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 bool[][] = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (16.02399pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5893) in paragraph at lines 2186--2188 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [36] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2241--2241 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 de-mo- Overfull \hbox (38.73457pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 float[][] = Overfull \hbox (50.36418pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (2.6847pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 tions: Overfull \hbox (88.97314pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , Overfull \hbox (68.53346pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (75.19351pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 tar- Overfull \hbox (17.93463pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Overfull \hbox (19.59468pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (11.3646pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 str[][] = Overfull \hbox (26.75435pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (52.02399pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5077) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = - Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cre- Overfull \hbox (90.54375pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 ate_nucleotide_sequence_from: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BAR- Overfull \hbox (33.99452pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 CODE_STRING\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 bar- Overfull \hbox (13.79442pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 code_string: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (52.88371pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 drug_resistant_string: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (43.23422pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 msp_variant_value: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (64.34395pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 pfemp1_variants_values: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 bar- Overfull \hbox (155.51305pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 code_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (194.60234pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 drug_resistant_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = [37] Overfull \vbox (135.66997pt too high) has occurred while \output is active [38] Underfull \hbox (badness 5893) in paragraph at lines 2268--2270 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [39] Overfull \hbox (11.18481pt too wide) in paragraph at lines 2357--2357 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 de-mo- Overfull \hbox (44.73457pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 float[][] Underfull \hbox (badness 8151) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tar- Overfull \hbox (56.36418pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tions: Overfull \hbox (94.97314pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.19351pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tar- Overfull \hbox (23.93463pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (25.59468pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tar- Overfull \hbox (17.3646pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 ig- Overfull \hbox (32.75435pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (58.02399pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Overfull \hbox (10.34447pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 irbc_type: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 mi- Overfull \hbox (42.5643pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 nor_epitope_type: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (10.3446pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 msp_type: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = [40] Overfull \vbox (3.66997pt too high) has occurred while \output is active [41] Underfull \hbox (badness 5893) in paragraph at lines 2384--2386 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e- Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (22.97314pt too wide) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (2.53346pt too wide) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (9.19351pt too wide) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 get_age_min: [][]int[][] = [42] Underfull \hbox (badness 5893) in paragraph at lines 2468--2470 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [43] Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 \T1/ptm/m/it/10 cide_name: Overfull \hbox (29.51352pt too wide) in paragraph at lines 2509--2509 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (32.87419pt too wide) in paragraph at lines 2509--2509 \T1/ptm/m/it/10 killing_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (74.87367pt too wide) in paragraph at lines 2509--2509 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spray_coverage: [44] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2576--2576 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2576--2576 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2576--2576 \T1/ptm/m/it/10 file- Underfull \hbox (badness 10000) in paragraph at lines 2576--2576 \T1/ptm/m/it/10 name: Underfull \hbox (badness 10000) in paragraph at lines 2576--2576 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 6893) in paragraph at lines 2593--2593 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[] [] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2637--2637 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , [45] Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 tar-gets: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 drug: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.88365pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 6204) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du- Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 ra-tion: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 broad- Overfull \hbox (41.29442pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 cast_event_name: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Overfull \hbox (48.38399pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 ceived_Treatment\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 2673--2677 []\T1/pcr/b/n/10 of individuals to target with the intervention. Default is Underfull \hbox (badness 10000) in paragraph at lines 2673--2677 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 properties\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 [ { "trigger":"NewClinicalCase","coverage":0. Underfull \hbox (badness 10000) in paragraph at lines 2673--2677 \T1/pcr/m/n/10 8,"agemin":15,"agemax":70, "seek":0.4,"rate":0.3}, Underfull \hbox (badness 10000) in paragraph at lines 2673--2677 \T1/pcr/m/n/10 {"trigger":"NewSevereCase","coverage":0.8,"seek":0.6, Underfull \hbox (badness 10000) in paragraph at lines 2691--2692 []\T1/pcr/b/n/10 must have to receive the intervention. For example, Underfull \hbox (badness 10000) in paragraph at lines 2691--2692 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 individuals\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 ["IndividualProperty1:PropertyValue1", [46] Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis- Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 \T1/ptm/m/it/10 0.0013698630136986301\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_e ff: Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 \T1/ptm/m/it/10 0.0006849315068493151\T1/ptm/m/n/10 , \T1/ptm/m/it/10 iv_name: Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Us-ageDe-pen-de ntBed-net\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 \T1/ptm/m/it/10 sonal_dependence: [][]dict[][] = None\T1/ptm/m/n/10 , [47] [48] Underfull \hbox (badness 10000) in paragraph at lines 2920--2920 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2920--2920 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [49] Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep- Underfull \hbox (badness 7273) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 e-ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (34.97314pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (14.53346pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (21.19351pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 7667) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 broad- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 cast_event: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac-cine_type: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ac-qui-si-tion- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 Block-ing\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac - Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 vac-cine_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 cine_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac- Overfull \hbox (29.97394pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 cine_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ef-fi- Overfull \hbox (2.56361pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 cacy_is_multiplicative: [50] Underfull \hbox (badness 5893) in paragraph at lines 2957--2959 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 3019--3019 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3019--3019 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [51] Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 clude_vector_state: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 ify_by: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 GENOME\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 com- Overfull \hbox (9.02399pt too wide) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 bine_similar_genomes: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spe- Overfull \hbox (102.76315pt too wide) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 cific_genome_combinations_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Overfull \hbox (64.54318pt too wide) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 lele_combinations_for_stratification: Overfull \hbox (2.32376pt too wide) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 les_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [52] Underfull \hbox (badness 10000) in paragraph at lines 3134--3134 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 6893) in paragraph at lines 3153--3153 \T1/ptm/m/it/10 = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 \T1/ptm/m/it/10 ual_property_filter: Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 in-fec- Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 \T1/ptm/m/it/10 tious-ness_bins: Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (4.30418pt too wide) in paragraph at lines 3153--3153 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 7291) in paragraph at lines 3153--3153 [][]\T1/ptm/m/it/10 int[][] = 100\T1/ptm/m/n/10 , \T1/ptm/m/it/10 par-a- Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [53] Underfull \hbox (badness 10000) in paragraph at lines 3214--3214 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i- Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 nodes: Overfull \hbox (3.20416pt too wide) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 pretty_format: Overfull \hbox (15.2441pt too wide) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 port_description: [54] Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re-port-Malar- Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 i-aFil-tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 min_age_years: Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 max_age_years: Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 [][]\T1/ptm/m/it/10 float[][] = 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 has_interventions: Overfull \hbox (74.41385pt too wide) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 clude_30day_avg_infection_duration: [55] Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 start_day: Overfull \hbox (6.45485pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 re-port- Overfull \hbox (21.46431pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 re- Overfull \hbox (28.1245pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 port_filename: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Spa- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 tial-Re- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 port- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 Malar- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 i-aFil- Overfull \hbox (13.23434pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 spa- Overfull \hbox (56.87419pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 tial_output_channels: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 ^^PBlood_Smear_Gametocyte_Prevalence^^Q, ^^PBlood_Smear_Parasite _Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 ^^PCam-paign_Cost^^Q, ^^PDaily_Bites_Per_Human^^Q, ^^PDaily_EIR^ ^Q, ^^PDis-ease_Deaths^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 ^^PNew_Reported_Infections^^Q, ^^PNew_Severe_Cases^^Q, ^^PPCR_Ga metocyte_Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 ^^PPCR_Parasite_Prevalence^^Q, ^^PPfHRP2_Prevalence^^Q, ^^PPop-u -la-tion^^Q, ^^PPreva- Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 lence^^Q, ^^PRain-fall^^Q, ^^PRel-a-tive_Humidity^^Q, ^^PTrue_Pr evalence^^Q De-faults: [56] Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 6893) in paragraph at lines 3369--3369 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3390--3390 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 3390--3390 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- Underfull \hbox (badness 10000) in paragraph at lines 3390--3390 \T1/ptm/m/it/10 clude_infection_table: Underfull \hbox (badness 10000) in paragraph at lines 3390--3390 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- [57] Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 re-port-ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Overfull \hbox (10.30418pt too wide) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 port-ing_interval: Overfull \hbox (10.30418pt too wide) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (20.78384pt too wide) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 port_description: [58] [59] Underfull \hbox (badness 10000) in paragraph at lines 3607--3607 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3607--3607 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (26.78384pt too wide) in paragraph at lines 3607--3607 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 6526) in paragraph at lines 3607--3607 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3607--3607 \T1/ptm/m/it/10 ify_by_gender: Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (14.48471pt too wide) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 in-di- Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 vid- Overfull \hbox (74.78384pt too wide) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 [][]\T1/ptm/m/it/10 str[][] Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 strat- Overfull \hbox (35.68442pt too wide) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 ify_by_gender: [60] Overfull \hbox (47.85474pt too wide) in paragraph at lines 3675--3675 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (49.79494pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 man- Overfull \hbox (35.35486pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 i- Overfull \hbox (45.63463pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (46.26491pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 bar- Overfull \hbox (55.34474pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 codes: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (122.7736pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 drug_resistant_strings: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (148.3231pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 drug_resistant_statistic_type: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (240.52356pt too wide) in paragraph at lines 3675--3675 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 NUM_PEOPLE_WITH_RESISTANT_INFECTION\TS1/ptm/m /it/10 '\T1/ptm/m/n/10 , Overfull \hbox (68.48471pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 age_bins: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (40.35486pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 in- Overfull \hbox (40.35486pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 di- Overfull \hbox (44.7948pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 vid- Overfull \hbox (128.78384pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 ual_property_to_collect: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (36.0248pt too wide) in paragraph at lines 3675--3675 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Overfull \hbox (50.76463pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 strat- Overfull \hbox (89.68442pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 ify_by_gender: Overfull \hbox (39.8048pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (40.24501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 1\T1/pcr/m/n/10 ) [61] Underfull \hbox (badness 10000) in paragraph at lines 3726--3726 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Overfull \hbox (17.85474pt too wide) in paragraph at lines 3755--3755 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (19.79494pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 man- Overfull \hbox (5.35486pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 i- Overfull \hbox (15.63463pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (48.68404pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 species_list: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (22.85487pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (20.76463pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 strat- Overfull \hbox (60.89413pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 ify_by_species: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 in- Overfull \hbox (70.75449pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 clude_wolbachia: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 in- Overfull \hbox (65.80426pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 clude_gestation: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (16.26491pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 bar- Overfull \hbox (25.34474pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 codes: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (26.35487pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [62] Underfull \hbox (badness 10000) in paragraph at lines 3795--3795 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 event_list\T1/ptm/m/n/10 , Overfull \hbox (6.34352pt too wide) in paragraph at lines 3795--3795 \T1/ptm/m/it/10 only_include_events_in_list=True\T1/ptm/m/n/10 , [63] Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 36500000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 re- Overfull \hbox (15.2441pt too wide) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3858--3858 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3858--3858 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 3858--3858 \T1/ptm/m/it/10 En-abled: bool = [64] Underfull \hbox (badness 10000) in paragraph at lines 3906--3906 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3906--3906 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 3906--3906 \T1/ptm/m/it/10 En-abled: bool = Underfull \hbox (badness 10000) in paragraph at lines 3930--3930 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3930--3930 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3930--3930 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 3930--3930 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (55.2345pt too wide) in paragraph at lines 3955--3955 []\T1/ptm/m/it/10 class_name: Overfull \hbox (15.80469pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 str Overfull \hbox (11.99501pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 = Overfull \hbox (28.85487pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (18.57497pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 pa- Overfull \hbox (24.53493pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 ram- Overfull \hbox (13.01491pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 e- Overfull \hbox (23.4746pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 ters: Overfull \hbox (20.24474pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 dict Overfull \hbox (11.99501pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 = Overfull \hbox (27.5448pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (19.68495pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 En- Overfull \hbox (30.7948pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 abled: Overfull \hbox (23.0249pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 = Overfull \hbox (26.08485pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (66.5943pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (23.0249pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 = Overfull \hbox (29.58485pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) [65] Underfull \hbox (badness 5832) in paragraph at lines 3958--3963 \T1/ptm/m/n/10 The re-port can only be used when the sim-u-la-tion setup pa-ram -e-ter \T1/ptm/b/n/10 Malaria_Model \T1/ptm/m/n/10 is set to Underfull \hbox (badness 10000) in paragraph at lines 3980--3980 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 3980--3980 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 3980--3980 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 3980--3980 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 3980--3980 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 4004--4004 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 bool = [66] Underfull \hbox (badness 10000) in paragraph at lines 4029--4029 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 4029--4029 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 6236) in paragraph at lines 4077--4077 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 4077--4077 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4077--4077 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , [67] Underfull \hbox (badness 10000) in paragraph at lines 4101--4101 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4101--4101 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4101--4101 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4101--4101 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4101--4101 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4130--4130 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4130--4130 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4130--4130 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4130--4130 \T1/ptm/m/it/10 En-abled: Overfull \hbox (6.5943pt too wide) in paragraph at lines 4130--4130 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 4174--4174 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 bool = [68] Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 str = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 bool = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (19.2345pt too wide) in paragraph at lines 4221--4221 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 e-ters: Underfull \hbox (badness 8151) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 dict = Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 abled: Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (30.5943pt too wide) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 Pretty_Format: [69] Overfull \hbox (67.2345pt too wide) in paragraph at lines 4249--4249 []\T1/ptm/m/it/10 class_name: Overfull \hbox (27.80469pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 str Overfull \hbox (23.99501pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 = Overfull \hbox (40.85487pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (30.57497pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 pa- Overfull \hbox (36.53493pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 ram- Overfull \hbox (25.01491pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 e- Overfull \hbox (35.4746pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 ters: Overfull \hbox (32.24474pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 dict Overfull \hbox (23.99501pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 = Overfull \hbox (39.5448pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (31.68495pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 En- Overfull \hbox (42.7948pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 abled: Overfull \hbox (35.0249pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 = Overfull \hbox (38.08485pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (78.5943pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (35.0249pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 = Overfull \hbox (41.58485pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 4277--4277 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4277--4277 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4277--4277 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4277--4277 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4277--4277 \T1/ptm/m/it/10 Pretty_Format: [70] Overfull \hbox (37.2345pt too wide) in paragraph at lines 4301--4301 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 str Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 = Overfull \hbox (10.85487pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (0.57497pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 pa- Overfull \hbox (6.53493pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 ram- Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 e- Overfull \hbox (5.4746pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 ters: Overfull \hbox (2.24474pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 dict Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 = Overfull \hbox (9.5448pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (1.68495pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 En- Overfull \hbox (12.7948pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 abled: Overfull \hbox (5.0249pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 = Overfull \hbox (8.08485pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (48.5943pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (5.0249pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 = Overfull \hbox (11.58485pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 4326--4326 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4326--4326 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4326--4326 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 4326--4326 \T1/ptm/m/it/10 Pretty_Format: [71] Underfull \hbox (badness 10000) in paragraph at lines 4383--4383 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , Overfull \hbox (24.52415pt too wide) in paragraph at lines 4383--4383 \T1/ptm/m/it/10 var_gene_randomness_type: Underfull \hbox (badness 10000) in paragraph at lines 4383--4383 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 4384--4386 \T1/ptm/m/n/10 Sets up the de-fault pa-ram-e-ters for par-a-site ge-net-ics sim -u-la-tions Malaria_Model = [72] Underfull \hbox (badness 10000) in paragraph at lines 4524--4524 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 species_name: Underfull \hbox (badness 10000) in paragraph at lines 4524--4524 [][]\T1/ptm/m/it/10 str[][]\T1/ptm/m/n/10 , \T1/ptm/m/it/10 habi-tat_type: [][] str[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7631) in paragraph at lines 4525--4528 \T1/ptm/m/n/10 Set the Max_Larval_Capacity for a given species and habi-tat. Ef -fec-tively do-ing some-thing [73] [74] [75] Underfull \hbox (badness 10000) in paragraph at lines 4862--4862 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , \T1/ptm/m/it/10 in-sec- Underfull \hbox (badness 6675) in paragraph at lines 4862--4862 \T1/ptm/m/it/10 ti-cide_name: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 5939) in paragraph at lines 4862--4862 \T1/ptm/m/it/10 species: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 al- Underfull \hbox (badness 6047) in paragraph at lines 4862--4862 \T1/ptm/m/it/10 block-ing: [][]float[][] = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4862--4862 \T1/ptm/m/it/10 pelling: [][]float[][] = 1.0\T1/ptm/m/n/10 , [76] Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 \T1/ptm/m/it/10 driver_type: [][]str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 CL AS-SIC\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 shred-ding_allele_required : Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al-lele_shredding_fraction : Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 [][]\T1/ptm/m/it/10 float[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 \T1/ptm/m/it/10 lele_to_shred_to_surviving_fraction: [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 5064--5064 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 species_name\T1/ptm/m/ n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5064--5064 \T1/ptm/m/it/10 habi-tat_type\T1/ptm/m/n/10 , Underfull \hbox (badness 7631) in paragraph at lines 5065--5068 \T1/ptm/m/n/10 Set the Max_Larval_Capacity for a given species and habi-tat. Ef -fec-tively do-ing some-thing [79] [80] LaTeX Warning: Reference `emodpy_malaria:module-emodpy_malaria' on page 81 unde fined on input line 5097. LaTeX Warning: Reference `emodpy_malaria.demographics:module-emodpy_malaria.dem ographics' on page 81 undefined on input line 5098. LaTeX Warning: Reference `emodpy_malaria.demographics.MalariaDemographics:modul e-emodpy_malaria.demographics.MalariaDemographics' on page 81 undefined on inpu t line 5099. Overfull \hbox (54.6225pt too wide) in paragraph at lines 5099--5100 []\T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions:module-emodpy_malaria.in terventions' on page 81 undefined on input line 5100. LaTeX Warning: Reference `emodpy_malaria.interventions.bednet:module-emodpy_mal aria.interventions.bednet' on page 81 undefined on input line 5101. LaTeX Warning: Reference `emodpy_malaria.interventions.common:module-emodpy_mal aria.interventions.common' on page 81 undefined on input line 5102. LaTeX Warning: Reference `emodpy_malaria.interventions.community_health_worker: module-emodpy_malaria.interventions.community_health_worker' on page 81 undefin ed on input line 5103. Overfull \hbox (84.6225pt too wide) in paragraph at lines 5103--5104 []\T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/m/ n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.diag_survey:module-emodp y_malaria.interventions.diag_survey' on page 81 undefined on input line 5104. Overfull \hbox (12.6225pt too wide) in paragraph at lines 5104--5105 []\T1/pcr/m/n/10 emodpy_malaria.interventions.diag_survey\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.drug:module-emodpy_malar ia.interventions.drug' on page 81 undefined on input line 5105. LaTeX Warning: Reference `emodpy_malaria.interventions.drug_campaign:module-emo dpy_malaria.interventions.drug_campaign' on page 81 undefined on input line 510 6. Overfull \hbox (24.6225pt too wide) in paragraph at lines 5106--5107 []\T1/pcr/m/n/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.inputeir:module-emodpy_m alaria.interventions.inputeir' on page 81 undefined on input line 5107. Underfull \hbox (badness 10000) in paragraph at lines 5107--5108 []\T1/pcr/m/n/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.irs:module-emodpy_malari a.interventions.irs' on page 81 undefined on input line 5108. LaTeX Warning: Reference `emodpy_malaria.interventions.ivermectin:module-emodpy _malaria.interventions.ivermectin' on page 81 undefined on input line 5109. Overfull \hbox (6.6225pt too wide) in paragraph at lines 5109--5110 []\T1/pcr/m/n/10 emodpy_malaria.interventions.ivermectin\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.mosquitorelease:module-e modpy_malaria.interventions.mosquitorelease' on page 81 undefined on input line 5110. Overfull \hbox (36.6225pt too wide) in paragraph at lines 5110--5111 []\T1/pcr/m/n/10 emodpy_malaria.interventions.mosquitorelease\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.outbreak:module-emodpy_m alaria.interventions.outbreak' on page 81 undefined on input line 5111. Underfull \hbox (badness 10000) in paragraph at lines 5111--5112 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.outdoorrestkill:module-e modpy_malaria.interventions.outdoorrestkill' on page 81 undefined on input line 5112. Overfull \hbox (36.6225pt too wide) in paragraph at lines 5112--5113 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outdoorrestkill\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.spacespraying:module-emo dpy_malaria.interventions.spacespraying' on page 81 undefined on input line 511 3. Overfull \hbox (24.6225pt too wide) in paragraph at lines 5113--5114 []\T1/pcr/m/n/10 emodpy_malaria.interventions.spacespraying\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.sugartrap:module-emodpy_ malaria.interventions.sugartrap' on page 81 undefined on input line 5114. Overfull \hbox (0.6225pt too wide) in paragraph at lines 5114--5115 []\T1/pcr/m/n/10 emodpy_malaria.interventions.sugartrap\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.treatment_seeking:module -emodpy_malaria.interventions.treatment_seeking' on page 81 undefined on input line 5115. Overfull \hbox (48.6225pt too wide) in paragraph at lines 5115--5116 []\T1/pcr/m/n/10 emodpy_malaria.interventions.treatment_seeking\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.udbednet:module-emodpy_m alaria.interventions.udbednet' on page 81 undefined on input line 5116. Underfull \hbox (badness 10000) in paragraph at lines 5116--5117 []\T1/pcr/m/n/10 emodpy_malaria.interventions.udbednet\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.vaccine:module-emodpy_ma laria.interventions.vaccine' on page 81 undefined on input line 5117. Underfull \hbox (badness 10000) in paragraph at lines 5117--5118 []\T1/pcr/m/n/10 emodpy_malaria.interventions.vaccine\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.malaria_config:module-emodpy_malaria.m alaria_config' on page 81 undefined on input line 5118. LaTeX Warning: Reference `emodpy_malaria.malaria_vector_species_params:module-e modpy_malaria.malaria_vector_species_params' on page 81 undefined on input line 5119. Overfull \hbox (36.6225pt too wide) in paragraph at lines 5119--5120 []\T1/pcr/m/n/10 emodpy_malaria.malaria_vector_species_params\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.reporters:module-emodpy_malaria.report ers' on page 81 undefined on input line 5120. LaTeX Warning: Reference `emodpy_malaria.reporters.builtin:module-emodpy_malari a.reporters.builtin' on page 81 undefined on input line 5121. LaTeX Warning: Reference `emodpy_malaria.vector_config:module-emodpy_malaria.ve ctor_config' on page 81 undefined on input line 5122. [81] No file institute-for-disease-modeling-emodpy-malaria.ind. (./institute-for-disease-modeling-emodpy-malaria.aux) Package rerunfilecheck Warning: File `institute-for-disease-modeling-emodpy-mal aria.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on institute-for-disease-modeling-emodpy-malaria.pdf (85 pages, 323569 bytes). Transcript written on institute-for-disease-modeling-emodpy-malaria.log. Latexmk: Index file 'institute-for-disease-modeling-emodpy-malaria.idx' was written Latexmk: Missing input file: 'institute-for-disease-modeling-emodpy-malaria.ind' from line 'No file institute-for-disease-modeling-emodpy-malaria.ind.' Latexmk: References changed. Latexmk: References changed. Latexmk: Log file says output to 'institute-for-disease-modeling-emodpy-malaria.pdf' Latexmk: Log file says output to 'institute-for-disease-modeling-emodpy-malaria.pdf' Latexmk: List of undefined refs and citations: Reference `emodpy_malaria.demographics.MalariaDemographics:module-emodpy_malaria.demographics.MalariaDemographics' on page 81 undefined on input line 5099 Reference `emodpy_malaria.demographics:module-emodpy_malaria.demographics' on page 81 undefined on input line 5098 Reference `emodpy_malaria.interventions.bednet:module-emodpy_malaria.interventions.bednet' on page 81 undefined on input line 5101 Reference `emodpy_malaria.interventions.common:module-emodpy_malaria.interventions.common' on page 81 undefined on input line 5102 Reference `emodpy_malaria.interventions.community_health_worker:module-emodpy_malaria.interventions.community_health_worker' on page 81 undefined on input line 5103 Reference `emodpy_malaria.interventions.diag_survey:module-emodpy_malaria.interventions.diag_survey' on page 81 undefined on input line 5104 Reference `emodpy_malaria.interventions.drug:module-emodpy_malaria.interventions.drug' on page 81 undefined on input line 5105 Reference `emodpy_malaria.interventions.drug_campaign:module-emodpy_malaria.interventions.drug_campaign' on page 81 undefined on input line 5106 Reference `emodpy_malaria.interventions.inputeir:module-emodpy_malaria.interventions.inputeir' on page 81 undefined on input line 5107 Reference `emodpy_malaria.interventions.irs:module-emodpy_malaria.interventions.irs' on page 81 undefined on input line 5108 Reference `emodpy_malaria.interventions.ivermectin:module-emodpy_malaria.interventions.ivermectin' on page 81 undefined on input line 5109 Reference `emodpy_malaria.interventions.mosquitorelease:module-emodpy_malaria.interventions.mosquitorelease' on page 81 undefined on input line 5110 Reference `emodpy_malaria.interventions.outbreak:module-emodpy_malaria.interventions.outbreak' on page 81 undefined on input line 5111 Reference `emodpy_malaria.interventions.outdoorrestkill:module-emodpy_malaria.interventions.outdoorrestkill' on page 81 undefined on input line 5112 Reference `emodpy_malaria.interventions.spacespraying:module-emodpy_malaria.interventions.spacespraying' on page 81 undefined on input line 5113 Reference `emodpy_malaria.interventions.sugartrap:module-emodpy_malaria.interventions.sugartrap' on page 81 undefined on input line 5114 Reference `emodpy_malaria.interventions.treatment_seeking:module-emodpy_malaria.interventions.treatment_seeking' on page 81 undefined on input line 5115 Reference `emodpy_malaria.interventions.udbednet:module-emodpy_malaria.interventions.udbednet' on page 81 undefined on input line 5116 Reference `emodpy_malaria.interventions.vaccine:module-emodpy_malaria.interventions.vaccine' on page 81 undefined on input line 5117 Reference `emodpy_malaria.interventions:module-emodpy_malaria.interventions' on page 81 undefined on input line 5100 Reference `emodpy_malaria.malaria_config:module-emodpy_malaria.malaria_config' on page 81 undefined on input line 5118 Reference `emodpy_malaria.malaria_vector_species_params:module-emodpy_malaria.malaria_vector_species_params' on page 81 undefined on input line 5119 Reference `emodpy_malaria.reporters.builtin:module-emodpy_malaria.reporters.builtin' on page 81 undefined on input line 5121 Reference `emodpy_malaria.reporters:module-emodpy_malaria.reporters' on page 81 undefined on input line 5120 Reference `emodpy_malaria.vector_config:module-emodpy_malaria.vector_config' on page 81 undefined on input line 5122 Reference `emodpy_malaria:module-emodpy_malaria' on page 81 undefined on input line 5097 Latexmk: Summary of warnings: Latex failed to resolve 26 reference(s) Rule 'makeindex institute-for-disease-modeling-emodpy-malaria.idx': File changes, etc: Non-existent destination files: 'institute-for-disease-modeling-emodpy-malaria.ind' ------------ Run number 1 of rule 'makeindex institute-for-disease-modeling-emodpy-malaria.idx' ------------ ------------ Running 'makeindex -s python.ist -o "institute-for-disease-modeling-emodpy-malaria.ind" "institute-for-disease-modeling-emodpy-malaria.idx"' ------------ Latexmk: applying rule 'makeindex institute-for-disease-modeling-emodpy-malaria.idx'... This is makeindex, version 2.15 [TeX Live 2017] (kpathsea + Thai support). Scanning style file ./python.ist.......done (7 attributes redefined, 0 ignored). Scanning input file institute-for-disease-modeling-emodpy-malaria.idx....done (209 entries accepted, 0 rejected). Sorting entries.....done (1655 comparisons). Generating output file institute-for-disease-modeling-emodpy-malaria.ind....done (446 lines written, 0 warnings). Output written in institute-for-disease-modeling-emodpy-malaria.ind. Transcript written in institute-for-disease-modeling-emodpy-malaria.ilg. 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= 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us- [12] Underfull \hbox (badness 10000) in paragraph at lines 811--811 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age=1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 811--811 \T1/ptm/m/it/10 block-ing_eff=1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_eff=1\T 1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 854--854 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , [13] Underfull \hbox (badness 10000) in paragraph at lines 880--880 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age_by_ages: Underfull \hbox (badness 10000) in paragraph at lines 880--880 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 880--880 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 itn_bednet: Overfull \hbox (109.64275pt too wide) in paragraph at lines 880--880 [][]\T1/ptm/m/n/10 emodpy_malaria.interventions.bednet.BednetIntervention[][] Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block-ing_eff: Underfull \hbox (badness 10000) in paragraph at lines 880--880 [][]\T1/ptm/m/it/10 float[][] = 0.9\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block- Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 = 0.000136986301369863\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 killing_eff: [][]float[][] = 0.6\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 killing_predecay_duration: Underfull \hbox (badness 10000) in paragraph at lines 880--880 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 killing_decay_rate: [][]float[][] Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 = 0.000136986301369863\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 880--880 [][]\T1/ptm/m/it/10 int[][] = 1095\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 ing_itn_event_name: [][]str[][] Underfull \hbox (badness 10000) in paragraph at lines 891--895 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"coverage":1,"min": 1, "max": 10}, { "coverage":1, Underfull \hbox (badness 10000) in paragraph at lines 891--895 \T1/pcr/m/n/10 "min": 11, "max": 50},{ "coverage":0.5, "birth":"birth", [14] Underfull \hbox (badness 10000) in paragraph at lines 948--948 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 948--948 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 event_name: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 948--948 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age_by_ages: Underfull \hbox (badness 10000) in paragraph at lines 948--948 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 itn_bednet: Overfull \hbox (60.91318pt too wide) in paragraph at lines 948--948 [][]\T1/ptm/m/n/10 emodpy_malaria.interventions.bednet.Bednet[][] Underfull \hbox (badness 10000) in paragraph at lines 948--948 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 948--948 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 948--948 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 948--948 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 954--954 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start: [][]int[][] = 0\T 1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Underfull \hbox (badness 10000) in paragraph at lines 954--954 [][]\T1/ptm/m/it/10 emod_api.schema_to_class.ReadOnlyDict[][] Underfull \hbox (badness 7308) in paragraph at lines 954--954 [][]\T1/ptm/m/it/10 str[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_propert y_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 954--954 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_propert y_restrictions: Underfull \hbox (badness 6477) in paragraph at lines 954--954 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-gered_ campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 967--971 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"coverage":1,"min": 1, "max": 10}, { "coverage":1, Underfull \hbox (badness 10000) in paragraph at lines 967--971 \T1/pcr/m/n/10 "min": 11, "max": 50},{ "coverage":0.5, "birth":"birth", [15] Underfull \hbox (badness 10000) in paragraph at lines 1029--1039 \T1/ptm/m/n/10 camp = DTK-Con-fig-Builder.from_defaults(sim_example) cov-er-age _by_ages = [{^^Pcov-er-age^^Q: 1, Underfull \hbox (badness 10000) in paragraph at lines 1029--1039 \T1/ptm/m/n/10 ^^Pmin^^Q: 1, ^^Pmax^^Q: 10}, {^^Pcov-er-age^^Q: 0.75, ^^Pmin^^Q : 11, ^^Pmax^^Q: 60}] add_ITN(camp, Underfull \hbox (badness 10000) in paragraph at lines 1029--1039 \T1/ptm/m/n/10 start=1, cov-er-age_by_ages, nodeIDs=[2, 5, 7, 21], node_propert y_restrictions=[{^^PPlace^^Q: ^^PUr- Underfull \hbox (badness 10000) in paragraph at lines 1029--1039 \T1/ptm/m/n/10 ban^^Q}], ind_property_restrictions=[{^^PBiting_Risk^^Q: ^^PHigh ^^Q], trig-gered_campaign_delay=14, trig- Underfull \hbox (badness 10000) in paragraph at lines 1050--1050 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 Mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1050--1050 \T1/ptm/m/it/10 ment_Sensitivity\T1/ptm/m/n/10 , \T1/ptm/m/it/10 De-tec- Underfull \hbox (badness 10000) in paragraph at lines 1050--1050 \T1/ptm/m/it/10 tion_Threshold\T1/ptm/m/n/10 , \T1/ptm/m/it/10 Di-ag-nos- [16] Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 trig-ger\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 de-lay\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 in-ter- Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 ven-tion\T1/ptm/m/n/10 , Overfull \hbox (36.58427pt too wide) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 ip_targeting=None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 cov-er- Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 age=1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 tar- Overfull \hbox (22.85468pt too wide) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 get_age_min=0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 tar- Overfull \hbox (45.51472pt too wide) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 get_age_max=125.0\T1/pcr/m/n/10 ) [17] Overfull \hbox (83.18481pt too wide) in paragraph at lines 1161--1161 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (82.35448pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 start_day: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , Overfull \hbox (59.02464pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 trig- Overfull \hbox (117.814pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ger_condition_list: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (54.01491pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 de- Overfull \hbox (56.79494pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 mo- Overfull \hbox (116.73457pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (56.24501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , Overfull \hbox (80.6847pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 node_ids: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (146.53346pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ind_property_restrictions: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (153.19351pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 node_property_restrictions: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tar- Overfull \hbox (95.93463pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 get_age_min: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tar- Overfull \hbox (97.59468pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 get_age_max: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (58.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tar- Overfull \hbox (89.3646pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 get_gender: Overfull \hbox (51.80469pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (59.69456pt too wide) in paragraph at lines 1161--1161 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Overfull \hbox (55.13475pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ini- Overfull \hbox (92.9145pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tial_amount: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 6\T1/ptm/m/n/10 , Overfull \hbox (128.46431pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 amount_in_shipment: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (145.67392pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 days_between_shipments: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 7\T1/ptm/m/n/10 , Overfull \hbox (54.57497pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 du- Overfull \hbox (53.31496pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ra- Overfull \hbox (60.13475pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tion: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (97.43495pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 3.40282e+38\T1/ptm/m/n/10 , Overfull \hbox (52.35486pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 in- Overfull \hbox (55.48474pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ter- Overfull \hbox (58.45485pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ven- Overfull \hbox (89.57469pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tion_config: Overfull \hbox (55.68495pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 any Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (147.144pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 max_distributed_per_day: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (86.5846pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 max_stock: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (61.80467pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 wait- Overfull \hbox (88.46458pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ing_period: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (52.24501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 0\T1/pcr/m/n/10 ) [18] Overfull \vbox (355.66753pt too high) has occurred while \output is active [19] [20] Overfull \hbox (31.21352pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 get: [][]ob-ject[][] Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 5203) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag-nos- Overfull \hbox (63.55446pt too wide) in paragraph at lines 1250--1250 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 tic_threshold: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 float[][] = 40\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 mea-sure- Overfull \hbox (1.01384pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 event_name: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Di-ag- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 nos-tic Sur-vey\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (27.58405pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 tive_diagnosis_configs: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 neg-a- Overfull \hbox (27.58405pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 tive_diagnosis_configs: Overfull \hbox (6.95406pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ceived_test_event: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ceived_Test\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 IP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 NP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ing_properties: Overfull \hbox (9.814pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ing_duration: Overfull \hbox (29.97432pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (47.68343pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 check_eligibility_at_trigger: Overfull \hbox (9.71407pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 pire_recent_drugs: [21] Underfull \hbox (badness 10000) in paragraph at lines 1283--1286 []\T1/pcr/b/n/10 diagnostic_type \T1/ptm/m/n/10 ^^U Type of malaria di-ag-nos-t ic used. De-fault is Underfull \hbox (badness 10000) in paragraph at lines 1325--1328 []\T1/ptm/m/n/10 In ga-me-to-cytes/microliter, use mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1348--1350 []\T1/pcr/b/n/10 measurement_sensitivity \T1/ptm/m/n/10 ^^U Set-ting for \T1/pt m/b/n/10 Mea-sure-ment_Sensitivity \T1/ptm/m/n/10 in [22] Underfull \hbox (badness 10000) in paragraph at lines 1371--1376 []\T1/pcr/b/n/10 IP_restrictions \T1/ptm/m/n/10 ^^U List of In-di-vid-u-al-Prop -erty key:value pairs that Underfull \hbox (badness 10000) in paragraph at lines 1371--1376 \T1/ptm/m/n/10 in-di-vid-u-als must have to re-ceive the di-ag-nos-tic in-ter-v en-tion. For Underfull \hbox (badness 10000) in paragraph at lines 1371--1376 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue 1"}, Underfull \hbox (badness 10000) in paragraph at lines 1378--1383 []\T1/pcr/b/n/10 NP_restrictions \T1/ptm/m/n/10 ^^U List of Node-Prop-erty key: value pairs Underfull \hbox (badness 10000) in paragraph at lines 1378--1383 \T1/ptm/m/n/10 that nodes must have to re-ceive the di-ag-nos-tic in-ter-ven-ti on. Underfull \hbox (badness 10000) in paragraph at lines 1378--1383 \T1/ptm/m/n/10 For ex-am-ple, \T1/pcr/m/n/10 [{"NodeProperty1":"PropertyValue1" }, Underfull \hbox (badness 10000) in paragraph at lines 1385--1389 []\T1/pcr/b/n/10 disqualifying_properties \T1/ptm/m/n/10 ^^U List of In-di-vid- u-al-Prop-erty Underfull \hbox (badness 10000) in paragraph at lines 1385--1389 \T1/ptm/m/n/10 key:value pairs that cause an in-ter-ven-tion to be aborted. For ex- Underfull \hbox (badness 10000) in paragraph at lines 1385--1389 \T1/ptm/m/n/10 am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue1"} , Underfull \hbox (badness 10000) in paragraph at lines 1408--1411 []\T1/pcr/b/n/10 expire_recent_drugs \T1/ptm/m/n/10 ^^U Adds \T1/pcr/m/n/10 [{" DrugStatus:None"}] \T1/ptm/m/n/10 to \T1/ptm/b/n/10 Prop- [23] Underfull \hbox (badness 10000) in paragraph at lines 1497--1497 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1497--1497 \T1/ptm/m/it/10 drug_code: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cam- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 paign_type: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 MDA\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6775) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: Overfull \hbox (19.21352pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 7344) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag- Overfull \hbox (51.55446pt too wide) in paragraph at lines 1528--1528 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 = 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 fmda_radius: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (6.22408pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 5667) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 balls: [][]int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 treat-ment_delay: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Overfull \hbox (17.97432pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 tar-get_group: Overfull \hbox (33.88365pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (33.19351pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (26.53346pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ing_properties: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ent_drug_configs: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 get_residents_only: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (35.68343pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 False\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Overfull \hbox (144.47322pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ing_drugs_event_name=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Received _Campaign_Drugs\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) [24] [25] [26] Underfull \hbox (badness 10000) in paragraph at lines 1679--1682 []\T1/pcr/b/n/10 ind_property_restrictions \T1/ptm/m/n/10 ^^U The set-ting for \T1/ptm/b/n/10 Prop- Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (57.71327pt too wide) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e-ti-tions: [][]int[ ][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 6348) in paragraph at lines 1724--1724 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][] list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (86.50304pt too wide) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 6032) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 ing_properties: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 trig-ger_condition_list: [][]list[][] = [27] Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 7504) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 treat-ment_delay: [][]int[ ][] Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure-ment_sensitivity: Underfull \hbox (badness 6063) in paragraph at lines 1739--1739 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [ ][]list[][] Overfull \hbox (92.50304pt too wide) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1740--1743 \T1/ptm/m/n/10 Add an MSAT (mass screen-ing and treat-ment) drug in-ter-ven-tio n to your cam-paign. See [28] Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 7221) in paragraph at lines 1754--1754 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [ ][]float[][] Underfull \hbox (badness 7595) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (92.50304pt too wide) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 7869) in paragraph at lines 1755--1758 \T1/ptm/m/n/10 Add an fMDA (fo-cal mass drug ad-min-is-tra-tion) drug in-ter-ve n-tion to your cam-paign. See Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 6141) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (75.71327pt too wide) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Overfull \hbox (9.55446pt too wide) in paragraph at lines 1769--1769 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (104.50304pt too wide) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- [29] Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (69.71327pt too wide) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 7613) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_covera ge: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS-TANCE_ONLY\ TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 node_ids: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (98.50304pt too wide) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1799--1799 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ev ent_trigger: [30] Underfull \hbox (badness 5756) in paragraph at lines 1831--1831 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 daily_eir: [][]list[][] Underfull \hbox (badness 5091) in paragraph at lines 1865--1865 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][]l ist[][] = None\T1/ptm/m/n/10 , [31] Underfull \hbox (badness 10000) in paragraph at lines 1905--1905 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1905--1905 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , [32] Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Overfull \hbox (11.51352pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (38.20403pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 killing_box_duration_days: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (98.1333pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 killing_exponential_decay_constant_days: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 int[][] = 90\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (13.73363pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 pelling_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (40.42413pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 pelling_box_duration_days: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (100.35341pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 pelling_exponential_decay_constant_days: [33] Underfull \hbox (badness 10000) in paragraph at lines 2038--2038 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n /10 , Underfull \hbox (badness 10000) in paragraph at lines 2047--2047 []\T1/ptm/m/it/10 schema_path_container\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2047--2047 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2047--2047 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 re-leased_number: Underfull \hbox (badness 5954) in paragraph at lines 2090--2090 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 leased_fraction: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 leased_infectious: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 leased_species: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 re-leased_genome: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , [34] Underfull \hbox (badness 10000) in paragraph at lines 2110--2112 []\T1/pcr/b/n/10 released_infectious \T1/ptm/m/n/10 ^^U The frac-tion of vec-to rs re-leased that Underfull \hbox (badness 10000) in paragraph at lines 2110--2112 \T1/ptm/m/n/10 are to be in-fec-tious. One can only use this fea-ture when Overfull \hbox (16.27205pt too wide) in paragraph at lines 2110--2112 \T1/ptm/m/n/10 `Malaria_Model'!='MALARIA_MECHANISTIC_MODEL_WITH_PARASITE_GENETI CS' Underfull \hbox (badness 10000) in paragraph at lines 2136--2136 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (16.35448pt too wide) in paragraph at lines 2136--2136 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2136--2136 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 2136--2136 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2136--2136 \T1/ptm/m/it/10 file- Overfull \hbox (2.35487pt too wide) in paragraph at lines 2136--2136 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [35] Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Overfull \hbox (2.73457pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (14.36418pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (52.97314pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (32.53346pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (39.19351pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 5359) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ig- Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 bool[][] = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (16.02399pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5893) in paragraph at lines 2186--2188 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [36] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2241--2241 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 de-mo- Overfull \hbox (38.73457pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 float[][] = Overfull \hbox (50.36418pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (2.6847pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 tions: Overfull \hbox (88.97314pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , Overfull \hbox (68.53346pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (75.19351pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 tar- Overfull \hbox (17.93463pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Overfull \hbox (19.59468pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (11.3646pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 str[][] = Overfull \hbox (26.75435pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (52.02399pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5077) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = - Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cre- Overfull \hbox (90.54375pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 ate_nucleotide_sequence_from: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BAR- Overfull \hbox (33.99452pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 CODE_STRING\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 bar- Overfull \hbox (13.79442pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 code_string: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (52.88371pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 drug_resistant_string: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (43.23422pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 msp_variant_value: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (64.34395pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 pfemp1_variants_values: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 bar- Overfull \hbox (155.51305pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 code_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (194.60234pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 drug_resistant_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = [37] Overfull \vbox (135.66997pt too high) has occurred while \output is active [38] Underfull \hbox (badness 5893) in paragraph at lines 2268--2270 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [39] Overfull \hbox (11.18481pt too wide) in paragraph at lines 2357--2357 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 de-mo- Overfull \hbox (44.73457pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 float[][] Underfull \hbox (badness 8151) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tar- Overfull \hbox (56.36418pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tions: Overfull \hbox (94.97314pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.19351pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tar- Overfull \hbox (23.93463pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (25.59468pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tar- Overfull \hbox (17.3646pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 ig- Overfull \hbox (32.75435pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (58.02399pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Overfull \hbox (10.34447pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 irbc_type: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 mi- Overfull \hbox (42.5643pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 nor_epitope_type: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (10.3446pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 msp_type: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = [40] Overfull \vbox (3.66997pt too high) has occurred while \output is active [41] Underfull \hbox (badness 5893) in paragraph at lines 2384--2386 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e- Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (22.97314pt too wide) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (2.53346pt too wide) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (9.19351pt too wide) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 get_age_min: [][]int[][] = [42] Underfull \hbox (badness 5893) in paragraph at lines 2468--2470 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [43] Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 \T1/ptm/m/it/10 cide_name: Overfull \hbox (29.51352pt too wide) in paragraph at lines 2509--2509 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (32.87419pt too wide) in paragraph at lines 2509--2509 \T1/ptm/m/it/10 killing_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (74.87367pt too wide) in paragraph at lines 2509--2509 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spray_coverage: [44] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2576--2576 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2576--2576 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2576--2576 \T1/ptm/m/it/10 file- Underfull \hbox (badness 10000) in paragraph at lines 2576--2576 \T1/ptm/m/it/10 name: Underfull \hbox (badness 10000) in paragraph at lines 2576--2576 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 6893) in paragraph at lines 2593--2593 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[] [] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2637--2637 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , [45] Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 tar-gets: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 drug: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.88365pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 6204) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du- Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 ra-tion: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 broad- Overfull \hbox (41.29442pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 cast_event_name: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Overfull \hbox (48.38399pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 ceived_Treatment\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 2673--2677 []\T1/pcr/b/n/10 of individuals to target with the intervention. Default is Underfull \hbox (badness 10000) in paragraph at lines 2673--2677 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 properties\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 [ { "trigger":"NewClinicalCase","coverage":0. Underfull \hbox (badness 10000) in paragraph at lines 2673--2677 \T1/pcr/m/n/10 8,"agemin":15,"agemax":70, "seek":0.4,"rate":0.3}, Underfull \hbox (badness 10000) in paragraph at lines 2673--2677 \T1/pcr/m/n/10 {"trigger":"NewSevereCase","coverage":0.8,"seek":0.6, Underfull \hbox (badness 10000) in paragraph at lines 2691--2692 []\T1/pcr/b/n/10 must have to receive the intervention. For example, Underfull \hbox (badness 10000) in paragraph at lines 2691--2692 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 individuals\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 ["IndividualProperty1:PropertyValue1", [46] Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis- Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 \T1/ptm/m/it/10 0.0013698630136986301\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_e ff: Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 \T1/ptm/m/it/10 0.0006849315068493151\T1/ptm/m/n/10 , \T1/ptm/m/it/10 iv_name: Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Us-ageDe-pen-de ntBed-net\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 \T1/ptm/m/it/10 sonal_dependence: [][]dict[][] = None\T1/ptm/m/n/10 , [47] [48] Underfull \hbox (badness 10000) in paragraph at lines 2920--2920 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2920--2920 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [49] Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep- Underfull \hbox (badness 7273) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 e-ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (34.97314pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (14.53346pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (21.19351pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 7667) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 broad- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 cast_event: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac-cine_type: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ac-qui-si-tion- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 Block-ing\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac - Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 vac-cine_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 cine_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac- Overfull \hbox (29.97394pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 cine_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ef-fi- Overfull \hbox (2.56361pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 cacy_is_multiplicative: [50] Underfull \hbox (badness 5893) in paragraph at lines 2957--2959 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 3019--3019 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3019--3019 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [51] Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 clude_vector_state: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 ify_by: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 GENOME\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 com- Overfull \hbox (9.02399pt too wide) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 bine_similar_genomes: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spe- Overfull \hbox (102.76315pt too wide) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 cific_genome_combinations_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Overfull \hbox (64.54318pt too wide) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 lele_combinations_for_stratification: Overfull \hbox (2.32376pt too wide) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 les_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [52] Underfull \hbox (badness 10000) in paragraph at lines 3134--3134 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 6893) in paragraph at lines 3153--3153 \T1/ptm/m/it/10 = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 \T1/ptm/m/it/10 ual_property_filter: Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 in-fec- Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 \T1/ptm/m/it/10 tious-ness_bins: Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (4.30418pt too wide) in paragraph at lines 3153--3153 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 7291) in paragraph at lines 3153--3153 [][]\T1/ptm/m/it/10 int[][] = 100\T1/ptm/m/n/10 , \T1/ptm/m/it/10 par-a- Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [53] Underfull \hbox (badness 10000) in paragraph at lines 3214--3214 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i- Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 nodes: Overfull \hbox (3.20416pt too wide) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 pretty_format: Overfull \hbox (15.2441pt too wide) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 port_description: [54] Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re-port-Malar- Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 i-aFil-tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 min_age_years: Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 max_age_years: Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 [][]\T1/ptm/m/it/10 float[][] = 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 has_interventions: Overfull \hbox (74.41385pt too wide) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 clude_30day_avg_infection_duration: [55] Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 start_day: Overfull \hbox (6.45485pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 re-port- Overfull \hbox (21.46431pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 re- Overfull \hbox (28.1245pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 port_filename: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Spa- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 tial-Re- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 port- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 Malar- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 i-aFil- Overfull \hbox (13.23434pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 spa- Overfull \hbox (56.87419pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 tial_output_channels: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 ^^PBlood_Smear_Gametocyte_Prevalence^^Q, ^^PBlood_Smear_Parasite _Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 ^^PCam-paign_Cost^^Q, ^^PDaily_Bites_Per_Human^^Q, ^^PDaily_EIR^ ^Q, ^^PDis-ease_Deaths^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 ^^PNew_Reported_Infections^^Q, ^^PNew_Severe_Cases^^Q, ^^PPCR_Ga metocyte_Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 ^^PPCR_Parasite_Prevalence^^Q, ^^PPfHRP2_Prevalence^^Q, ^^PPop-u -la-tion^^Q, ^^PPreva- Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 lence^^Q, ^^PRain-fall^^Q, ^^PRel-a-tive_Humidity^^Q, ^^PTrue_Pr evalence^^Q De-faults: [56] Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 6893) in paragraph at lines 3369--3369 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3390--3390 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 3390--3390 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- Underfull \hbox (badness 10000) in paragraph at lines 3390--3390 \T1/ptm/m/it/10 clude_infection_table: Underfull \hbox (badness 10000) in paragraph at lines 3390--3390 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- [57] Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 re-port-ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Overfull \hbox (10.30418pt too wide) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 port-ing_interval: Overfull \hbox (10.30418pt too wide) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (20.78384pt too wide) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 port_description: [58] [59] Underfull \hbox (badness 10000) in paragraph at lines 3607--3607 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3607--3607 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (26.78384pt too wide) in paragraph at lines 3607--3607 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 6526) in paragraph at lines 3607--3607 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3607--3607 \T1/ptm/m/it/10 ify_by_gender: Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (14.48471pt too wide) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 in-di- Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 vid- Overfull \hbox (74.78384pt too wide) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 [][]\T1/ptm/m/it/10 str[][] Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 strat- Overfull \hbox (35.68442pt too wide) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 ify_by_gender: [60] Overfull \hbox (47.85474pt too wide) in paragraph at lines 3675--3675 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (49.79494pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 man- Overfull \hbox (35.35486pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 i- Overfull \hbox (45.63463pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (46.26491pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 bar- Overfull \hbox (55.34474pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 codes: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (122.7736pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 drug_resistant_strings: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (148.3231pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 drug_resistant_statistic_type: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (240.52356pt too wide) in paragraph at lines 3675--3675 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 NUM_PEOPLE_WITH_RESISTANT_INFECTION\TS1/ptm/m /it/10 '\T1/ptm/m/n/10 , Overfull \hbox (68.48471pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 age_bins: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (40.35486pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 in- Overfull \hbox (40.35486pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 di- Overfull \hbox (44.7948pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 vid- Overfull \hbox (128.78384pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 ual_property_to_collect: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (36.0248pt too wide) in paragraph at lines 3675--3675 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Overfull \hbox (50.76463pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 strat- Overfull \hbox (89.68442pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 ify_by_gender: Overfull \hbox (39.8048pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (40.24501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 1\T1/pcr/m/n/10 ) [61] Underfull \hbox (badness 10000) in paragraph at lines 3726--3726 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Overfull \hbox (17.85474pt too wide) in paragraph at lines 3755--3755 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (19.79494pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 man- Overfull \hbox (5.35486pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 i- Overfull \hbox (15.63463pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (48.68404pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 species_list: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (22.85487pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (20.76463pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 strat- Overfull \hbox (60.89413pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 ify_by_species: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 in- Overfull \hbox (70.75449pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 clude_wolbachia: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 in- Overfull \hbox (65.80426pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 clude_gestation: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (16.26491pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 bar- Overfull \hbox (25.34474pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 codes: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (26.35487pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [62] Underfull \hbox (badness 10000) in paragraph at lines 3795--3795 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 event_list\T1/ptm/m/n/10 , Overfull \hbox (6.34352pt too wide) in paragraph at lines 3795--3795 \T1/ptm/m/it/10 only_include_events_in_list=True\T1/ptm/m/n/10 , [63] Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 36500000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 re- Overfull \hbox (15.2441pt too wide) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3858--3858 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3858--3858 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 3858--3858 \T1/ptm/m/it/10 En-abled: bool = [64] Underfull \hbox (badness 10000) in paragraph at lines 3906--3906 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3906--3906 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 3906--3906 \T1/ptm/m/it/10 En-abled: bool = Underfull \hbox (badness 10000) in paragraph at lines 3930--3930 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3930--3930 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3930--3930 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 3930--3930 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (55.2345pt too wide) in paragraph at lines 3955--3955 []\T1/ptm/m/it/10 class_name: Overfull \hbox (15.80469pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 str Overfull \hbox (11.99501pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 = Overfull \hbox (28.85487pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (18.57497pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 pa- Overfull \hbox (24.53493pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 ram- Overfull \hbox (13.01491pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 e- Overfull \hbox (23.4746pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 ters: Overfull \hbox (20.24474pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 dict Overfull \hbox (11.99501pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 = Overfull \hbox (27.5448pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (19.68495pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 En- Overfull \hbox (30.7948pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 abled: Overfull \hbox (23.0249pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 = Overfull \hbox (26.08485pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (66.5943pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (23.0249pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 = Overfull \hbox (29.58485pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) [65] Underfull \hbox (badness 5832) in paragraph at lines 3958--3963 \T1/ptm/m/n/10 The re-port can only be used when the sim-u-la-tion setup pa-ram -e-ter \T1/ptm/b/n/10 Malaria_Model \T1/ptm/m/n/10 is set to Underfull \hbox (badness 10000) in paragraph at lines 3980--3980 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 3980--3980 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 3980--3980 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 3980--3980 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 3980--3980 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 4004--4004 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 bool = [66] Underfull \hbox (badness 10000) in paragraph at lines 4029--4029 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 4029--4029 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 6236) in paragraph at lines 4077--4077 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 4077--4077 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4077--4077 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , [67] Underfull \hbox (badness 10000) in paragraph at lines 4101--4101 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4101--4101 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4101--4101 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4101--4101 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4101--4101 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4130--4130 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4130--4130 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4130--4130 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4130--4130 \T1/ptm/m/it/10 En-abled: Overfull \hbox (6.5943pt too wide) in paragraph at lines 4130--4130 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 4174--4174 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 bool = [68] Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 str = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 bool = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (19.2345pt too wide) in paragraph at lines 4221--4221 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 e-ters: Underfull \hbox (badness 8151) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 dict = Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 abled: Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (30.5943pt too wide) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 Pretty_Format: [69] Overfull \hbox (67.2345pt too wide) in paragraph at lines 4249--4249 []\T1/ptm/m/it/10 class_name: Overfull \hbox (27.80469pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 str Overfull \hbox (23.99501pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 = Overfull \hbox (40.85487pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (30.57497pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 pa- Overfull \hbox (36.53493pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 ram- Overfull \hbox (25.01491pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 e- Overfull \hbox (35.4746pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 ters: Overfull \hbox (32.24474pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 dict Overfull \hbox (23.99501pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 = Overfull \hbox (39.5448pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (31.68495pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 En- Overfull \hbox (42.7948pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 abled: Overfull \hbox (35.0249pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 = Overfull \hbox (38.08485pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (78.5943pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (35.0249pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 = Overfull \hbox (41.58485pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 4277--4277 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4277--4277 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4277--4277 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4277--4277 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4277--4277 \T1/ptm/m/it/10 Pretty_Format: [70] Overfull \hbox (37.2345pt too wide) in paragraph at lines 4301--4301 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 str Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 = Overfull \hbox (10.85487pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (0.57497pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 pa- Overfull \hbox (6.53493pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 ram- Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 e- Overfull \hbox (5.4746pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 ters: Overfull \hbox (2.24474pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 dict Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 = Overfull \hbox (9.5448pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (1.68495pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 En- Overfull \hbox (12.7948pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 abled: Overfull \hbox (5.0249pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 = Overfull \hbox (8.08485pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (48.5943pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (5.0249pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 = Overfull \hbox (11.58485pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 4326--4326 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4326--4326 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4326--4326 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 4326--4326 \T1/ptm/m/it/10 Pretty_Format: [71] Underfull \hbox (badness 10000) in paragraph at lines 4383--4383 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , Overfull \hbox (24.52415pt too wide) in paragraph at lines 4383--4383 \T1/ptm/m/it/10 var_gene_randomness_type: Underfull \hbox (badness 10000) in paragraph at lines 4383--4383 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 4384--4386 \T1/ptm/m/n/10 Sets up the de-fault pa-ram-e-ters for par-a-site ge-net-ics sim -u-la-tions Malaria_Model = [72] Underfull \hbox (badness 10000) in paragraph at lines 4524--4524 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 species_name: Underfull \hbox (badness 10000) in paragraph at lines 4524--4524 [][]\T1/ptm/m/it/10 str[][]\T1/ptm/m/n/10 , \T1/ptm/m/it/10 habi-tat_type: [][] str[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7631) in paragraph at lines 4525--4528 \T1/ptm/m/n/10 Set the Max_Larval_Capacity for a given species and habi-tat. Ef -fec-tively do-ing some-thing [73] [74] [75] Underfull \hbox (badness 10000) in paragraph at lines 4862--4862 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , \T1/ptm/m/it/10 in-sec- Underfull \hbox (badness 6675) in paragraph at lines 4862--4862 \T1/ptm/m/it/10 ti-cide_name: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 5939) in paragraph at lines 4862--4862 \T1/ptm/m/it/10 species: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 al- Underfull \hbox (badness 6047) in paragraph at lines 4862--4862 \T1/ptm/m/it/10 block-ing: [][]float[][] = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4862--4862 \T1/ptm/m/it/10 pelling: [][]float[][] = 1.0\T1/ptm/m/n/10 , [76] Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 \T1/ptm/m/it/10 driver_type: [][]str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 CL AS-SIC\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 shred-ding_allele_required : Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al-lele_shredding_fraction : Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 [][]\T1/ptm/m/it/10 float[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 \T1/ptm/m/it/10 lele_to_shred_to_surviving_fraction: [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 5064--5064 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 species_name\T1/ptm/m/ n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5064--5064 \T1/ptm/m/it/10 habi-tat_type\T1/ptm/m/n/10 , Underfull \hbox (badness 7631) in paragraph at lines 5065--5068 \T1/ptm/m/n/10 Set the Max_Larval_Capacity for a given species and habi-tat. Ef -fec-tively do-ing some-thing [79] [80] Overfull \hbox (54.6225pt too wide) in paragraph at lines 5099--5100 []\T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 , Overfull \hbox (84.6225pt too wide) in paragraph at lines 5103--5104 []\T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/m/ n/10 , Overfull \hbox (12.6225pt too wide) in paragraph at lines 5104--5105 []\T1/pcr/m/n/10 emodpy_malaria.interventions.diag_survey\T1/ptm/m/n/10 , Overfull \hbox (24.6225pt too wide) in paragraph at lines 5106--5107 []\T1/pcr/m/n/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5107--5108 []\T1/pcr/m/n/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 , Overfull \hbox (6.6225pt too wide) in paragraph at lines 5109--5110 []\T1/pcr/m/n/10 emodpy_malaria.interventions.ivermectin\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 5110--5111 []\T1/pcr/m/n/10 emodpy_malaria.interventions.mosquitorelease\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5111--5112 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 5112--5113 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outdoorrestkill\T1/ptm/m/n/10 , Overfull \hbox (24.6225pt too wide) in paragraph at lines 5113--5114 []\T1/pcr/m/n/10 emodpy_malaria.interventions.spacespraying\T1/ptm/m/n/10 , Overfull \hbox (0.6225pt too wide) in paragraph at lines 5114--5115 []\T1/pcr/m/n/10 emodpy_malaria.interventions.sugartrap\T1/ptm/m/n/10 , Overfull \hbox (48.6225pt too wide) in paragraph at lines 5115--5116 []\T1/pcr/m/n/10 emodpy_malaria.interventions.treatment_seeking\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5116--5117 []\T1/pcr/m/n/10 emodpy_malaria.interventions.udbednet\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5117--5118 []\T1/pcr/m/n/10 emodpy_malaria.interventions.vaccine\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 5119--5120 []\T1/pcr/m/n/10 emodpy_malaria.malaria_vector_species_params\T1/ptm/m/n/10 , [81] (./institute-for-disease-modeling-emodpy-malaria.ind [82] Underfull \hbox (badness 10000) in paragraph at lines 8--10 []\T1/pcr/m/n/10 add_campaign_event() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 8--10 \T1/ptm/m/it/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Overfull \hbox (48.28003pt too wide) in paragraph at lines 10--12 \T1/ptm/m/it/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/m/n /10 ), Underfull \hbox (badness 10000) in paragraph at lines 12--14 []\T1/pcr/m/n/10 add_diagnostic_survey() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Underfull \hbox (badness 10000) in paragraph at lines 12--14 \T1/ptm/m/it/10 emodpy_malaria.interventions.diag_survey\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 14--16 []\T1/pcr/m/n/10 add_drug_campaign() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 14--16 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 16--18 []\T1/pcr/m/n/10 add_drug_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 18--20 []\T1/pcr/m/n/10 add_drug_status_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Underfull \hbox (badness 10000) in paragraph at lines 20--22 []\T1/pcr/m/n/10 add_event_recorder() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/pcr/m/n/10 add_fMDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 22--24 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 24--26 []\T1/pcr/m/n/10 add_genes_and_alleles() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Underfull \hbox (badness 10000) in paragraph at lines 28--30 []\T1/pcr/m/n/10 add_InputEIR() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 28--30 \T1/ptm/m/it/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 30--32 []\T1/pcr/m/n/10 add_insecticide_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 32--34 []\T1/pcr/m/n/10 add_insecticide_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 36--38 []\T1/pcr/m/n/10 add_ITN() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 38--40 []\T1/pcr/m/n/10 add_ITN_scheduled() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 40--42 []\T1/pcr/m/n/10 add_ITN_triggered() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 42--44 []\T1/pcr/m/n/10 add_larval_habitat_multiplier() Overfull \hbox (127.95007pt too wide) in paragraph at lines 42--44 \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics .MalariaDemographics Underfull \hbox (badness 10000) in paragraph at lines 46--48 []\T1/pcr/m/n/10 add_malaria_patient_json_report() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 48--50 []\T1/pcr/m/n/10 add_malaria_sql_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Underfull \hbox (badness 10000) in paragraph at lines 50--52 []\T1/pcr/m/n/10 add_malaria_summary_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 54--56 []\T1/pcr/m/n/10 add_malaria_transmission_report() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 56--58 []\T1/pcr/m/n/10 add_MDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 56--58 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 58--60 []\T1/pcr/m/n/10 add_MSAT() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 58--60 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 60--62 []\T1/pcr/m/n/10 add_mutation() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 62--64 []\T1/pcr/m/n/10 add_outbreak_individual() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in m od-ule Underfull \hbox (badness 10000) in paragraph at lines 62--64 \T1/ptm/m/it/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 64--66 \T1/ptm/m/it/10 ule emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 66--68 \T1/ptm/m/it/10 ule emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 68--70 []\T1/pcr/m/n/10 add_OutdoorRestKill() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 70--72 []\T1/pcr/m/n/10 add_report_event_counter() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 72--74 []\T1/pcr/m/n/10 add_report_intervention_pop_avg() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/pcr/m/n/10 add_report_node_demographics_malaria() [83] Overfull \hbox (52.1225pt too wide) in paragraph at lines 80--82 []\T1/pcr/m/n/10 add_report_node_demographics_malaria_genetics() Underfull \hbox (badness 10000) in paragraph at lines 82--84 []\T1/pcr/m/n/10 add_report_vector_genetics() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 86--88 []\T1/pcr/m/n/10 add_report_vector_stats() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in m od-ule Overfull \hbox (22.1225pt too wide) in paragraph at lines 88--90 []\T1/pcr/m/n/10 add_report_vector_stats_malaria_genetics() Underfull \hbox (badness 10000) in paragraph at lines 90--92 []\T1/pcr/m/n/10 add_rfMDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 90--92 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 92--94 []\T1/pcr/m/n/10 add_rfMSAT() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 92--94 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 94--96 []\T1/pcr/m/n/10 add_scheduled_vaccine() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Underfull \hbox (badness 10000) in paragraph at lines 94--96 \T1/ptm/m/it/10 emodpy_malaria.interventions.vaccine\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 96--98 []\T1/pcr/m/n/10 add_spatial_report_malaria_filtered() Underfull \hbox (badness 10000) in paragraph at lines 98--100 []\T1/pcr/m/n/10 add_species() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 100--102 []\T1/pcr/m/n/10 add_species() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 102--104 []\T1/pcr/m/n/10 add_species_drivers() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 104--105 []\T1/pcr/m/n/10 add_trait() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 105--107 []\T1/pcr/m/n/10 add_treatment_seeking() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Overfull \hbox (13.89015pt too wide) in paragraph at lines 105--107 \T1/ptm/m/it/10 emodpy_malaria.interventions.treatment_seeking\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 107--109 []\T1/pcr/m/n/10 add_vector_habitat_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 109--111 []\T1/pcr/m/n/10 AntimalarialDrug() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 109--111 \T1/ptm/m/it/10 emodpy_malaria.interventions.common\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 111--113 []\T1/pcr/m/n/10 AntimalarialDrug() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 116--118 []\T1/pcr/m/n/10 BasicBednet() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 118--120 []\T1/pcr/m/n/10 Bednet() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 120--122 []\T1/pcr/m/n/10 BednetIntervention() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Overfull \hbox (59.0599pt too wide) in paragraph at lines 125--127 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaImmunityReport Overfull \hbox (72.70978pt too wide) in paragraph at lines 127--129 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaPatientJSONReport Overfull \hbox (34.07018pt too wide) in paragraph at lines 129--131 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSqlReport Overfull \hbox (59.06006pt too wide) in paragraph at lines 131--133 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSummaryReport Overfull \hbox (79.58981pt too wide) in paragraph at lines 133--135 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSurveyJSONAnalyzer Overfull \hbox (34.07019pt too wide) in paragraph at lines 135--137 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportDrugStatus Overfull \hbox (44.06006pt too wide) in paragraph at lines 137--139 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportEventCounter Overfull \hbox (93.57004pt too wide) in paragraph at lines 139--141 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportHumanMigrationTracking Overfull \hbox (67.70004pt too wide) in paragraph at lines 141--143 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportInterventionPopAvg Overfull \hbox (52.68974pt too wide) in paragraph at lines 143--145 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportMalariaFiltered Overfull \hbox (68.25012pt too wide) in paragraph at lines 145--147 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographics Overfull \hbox (101.02975pt too wide) in paragraph at lines 147--149 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographicsMalaria Overfull \hbox (136.01923pt too wide) in paragraph at lines 149--151 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographicsMalariaGenetics Overfull \hbox (125.03925pt too wide) in paragraph at lines 151--153 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportSimpleMalariaTransmissionJSON Overfull \hbox (49.04977pt too wide) in paragraph at lines 153--155 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportVectorGenetics Overfull \hbox (54.46992pt too wide) in paragraph at lines 155--157 []\T1/pcr/m/n/10 config() 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Underfull \hbox (badness 10000) in paragraph at lines 232--234 []\T1/pcr/m/n/10 from_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (36.54083pt too wide) in paragraph at lines 232--234 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 234--236 []\T1/pcr/m/n/10 from_pop_csv() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (36.54083pt too wide) in paragraph at lines 234--236 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 236--238 []\T1/pcr/m/n/10 from_template_node() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Overfull \hbox (36.54083pt too wide) in paragraph at lines 236--238 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 241--243 []\T1/pcr/m/n/10 get_drug_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 243--245 []\T1/pcr/m/n/10 get_file_from_http() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 245--247 []\T1/pcr/m/n/10 get_species_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 247--249 []\T1/pcr/m/n/10 get_species_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 252--254 []\T1/pcr/m/n/10 InputEIR() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 252--254 \T1/ptm/m/it/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 254--256 []\T1/pcr/m/n/10 Ivermectin() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 254--256 \T1/ptm/m/it/10 emodpy_malaria.interventions.ivermectin\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 259--261 []\T1/pcr/m/n/10 MalariaDemographics \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Overfull \hbox (36.54083pt too wide) in paragraph at lines 259--261 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 261--263 []\T1/pcr/m/n/10 MalariaDiagnostic() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 261--263 \T1/ptm/m/it/10 emodpy_malaria.interventions.common\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 263--265 []\T1/pcr/m/n/10 MalariaImmunityReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 265--267 []\T1/pcr/m/n/10 MalariaPatientJSONReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 267--269 []\T1/pcr/m/n/10 MalariaSqlReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 269--271 []\T1/pcr/m/n/10 MalariaSummaryReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 271--273 []\T1/pcr/m/n/10 MalariaSurveyJSONAnalyzer \T1/ptm/m/n/10 (\T1/ptm/m/it/10 clas s in Overfull \hbox (74.6225pt too wide) in paragraph at lines 276--277 []| \T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/1 0 , Overfull \hbox (2.6225pt too wide) in paragraph at lines 278--279 []| \T1/pcr/m/n/10 emodpy_malaria.interventions.bednet\T1/ptm/m/n/10 , Overfull \hbox (2.6225pt too wide) in paragraph at lines 279--280 []| \T1/pcr/m/n/10 emodpy_malaria.interventions.common\T1/ptm/m/n/10 , [85] Overfull \hbox (104.6225pt too wide) in paragraph at lines 280--281 []| \T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/ m/n/10 , Overfull \hbox (32.6225pt too wide) in paragraph at lines 281--282 []| \T1/pcr/m/n/10 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= 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us- [12] Underfull \hbox (badness 10000) in paragraph at lines 811--811 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age=1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 811--811 \T1/ptm/m/it/10 block-ing_eff=1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_eff=1\T 1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 854--854 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , [13] Underfull \hbox (badness 10000) in paragraph at lines 880--880 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age_by_ages: Underfull \hbox (badness 10000) in paragraph at lines 880--880 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 880--880 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 itn_bednet: Overfull \hbox (109.64275pt too wide) in paragraph at lines 880--880 [][]\T1/ptm/m/n/10 emodpy_malaria.interventions.bednet.BednetIntervention[][] Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block-ing_eff: Underfull \hbox (badness 10000) in paragraph at lines 880--880 [][]\T1/ptm/m/it/10 float[][] = 0.9\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block- Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 = 0.000136986301369863\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 killing_eff: [][]float[][] = 0.6\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 killing_predecay_duration: Underfull \hbox (badness 10000) in paragraph at lines 880--880 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 killing_decay_rate: [][]float[][] Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 = 0.000136986301369863\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 880--880 [][]\T1/ptm/m/it/10 int[][] = 1095\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Underfull \hbox (badness 10000) in paragraph at lines 880--880 \T1/ptm/m/it/10 ing_itn_event_name: [][]str[][] Underfull \hbox (badness 10000) in paragraph at lines 891--895 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"coverage":1,"min": 1, "max": 10}, { "coverage":1, Underfull \hbox (badness 10000) in paragraph at lines 891--895 \T1/pcr/m/n/10 "min": 11, "max": 50},{ "coverage":0.5, "birth":"birth", [14] Underfull \hbox (badness 10000) in paragraph at lines 948--948 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 948--948 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 event_name: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 948--948 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age_by_ages: Underfull \hbox (badness 10000) in paragraph at lines 948--948 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 itn_bednet: Overfull \hbox (60.91318pt too wide) in paragraph at lines 948--948 [][]\T1/ptm/m/n/10 emodpy_malaria.interventions.bednet.Bednet[][] Underfull \hbox (badness 10000) in paragraph at lines 948--948 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 948--948 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 948--948 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 948--948 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 954--954 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start: [][]int[][] = 0\T 1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Underfull \hbox (badness 10000) in paragraph at lines 954--954 [][]\T1/ptm/m/it/10 emod_api.schema_to_class.ReadOnlyDict[][] Underfull \hbox (badness 7308) in paragraph at lines 954--954 [][]\T1/ptm/m/it/10 str[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_propert y_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 954--954 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_propert y_restrictions: Underfull \hbox (badness 6477) in paragraph at lines 954--954 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-gered_ campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 967--971 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"coverage":1,"min": 1, "max": 10}, { "coverage":1, Underfull \hbox (badness 10000) in paragraph at lines 967--971 \T1/pcr/m/n/10 "min": 11, "max": 50},{ "coverage":0.5, "birth":"birth", [15] Underfull \hbox (badness 10000) in paragraph at lines 1029--1039 \T1/ptm/m/n/10 camp = DTK-Con-fig-Builder.from_defaults(sim_example) cov-er-age _by_ages = [{^^Pcov-er-age^^Q: 1, Underfull \hbox (badness 10000) in paragraph at lines 1029--1039 \T1/ptm/m/n/10 ^^Pmin^^Q: 1, ^^Pmax^^Q: 10}, {^^Pcov-er-age^^Q: 0.75, ^^Pmin^^Q : 11, ^^Pmax^^Q: 60}] add_ITN(camp, Underfull \hbox (badness 10000) in paragraph at lines 1029--1039 \T1/ptm/m/n/10 start=1, cov-er-age_by_ages, nodeIDs=[2, 5, 7, 21], node_propert y_restrictions=[{^^PPlace^^Q: ^^PUr- Underfull \hbox (badness 10000) in paragraph at lines 1029--1039 \T1/ptm/m/n/10 ban^^Q}], ind_property_restrictions=[{^^PBiting_Risk^^Q: ^^PHigh ^^Q], trig-gered_campaign_delay=14, trig- Underfull \hbox (badness 10000) in paragraph at lines 1050--1050 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 Mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1050--1050 \T1/ptm/m/it/10 ment_Sensitivity\T1/ptm/m/n/10 , \T1/ptm/m/it/10 De-tec- Underfull \hbox (badness 10000) in paragraph at lines 1050--1050 \T1/ptm/m/it/10 tion_Threshold\T1/ptm/m/n/10 , \T1/ptm/m/it/10 Di-ag-nos- [16] Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 trig-ger\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 de-lay\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 in-ter- Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 ven-tion\T1/ptm/m/n/10 , Overfull \hbox (36.58427pt too wide) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 ip_targeting=None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 cov-er- Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 age=1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 tar- Overfull \hbox (22.85468pt too wide) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 get_age_min=0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 tar- Overfull \hbox (45.51472pt too wide) in paragraph at lines 1114--1114 \T1/ptm/m/it/10 get_age_max=125.0\T1/pcr/m/n/10 ) [17] Overfull \hbox (83.18481pt too wide) in paragraph at lines 1161--1161 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (82.35448pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 start_day: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , Overfull \hbox (59.02464pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 trig- Overfull \hbox (117.814pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ger_condition_list: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (54.01491pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 de- Overfull \hbox (56.79494pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 mo- Overfull \hbox (116.73457pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (56.24501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , Overfull \hbox (80.6847pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 node_ids: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (146.53346pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ind_property_restrictions: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (153.19351pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 node_property_restrictions: Overfull \hbox (53.47458pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tar- Overfull \hbox (95.93463pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 get_age_min: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tar- Overfull \hbox (97.59468pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 get_age_max: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (58.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tar- Overfull \hbox (89.3646pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 get_gender: Overfull \hbox (51.80469pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (59.69456pt too wide) in paragraph at lines 1161--1161 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Overfull \hbox (55.13475pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ini- Overfull \hbox (92.9145pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tial_amount: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 6\T1/ptm/m/n/10 , Overfull \hbox (128.46431pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 amount_in_shipment: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (145.67392pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 days_between_shipments: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 7\T1/ptm/m/n/10 , Overfull \hbox (54.57497pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 du- Overfull \hbox (53.31496pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ra- Overfull \hbox (60.13475pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tion: Overfull \hbox (59.0249pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (97.43495pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 3.40282e+38\T1/ptm/m/n/10 , Overfull \hbox (52.35486pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 in- Overfull \hbox (55.48474pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ter- Overfull \hbox (58.45485pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ven- Overfull \hbox (89.57469pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 tion_config: Overfull \hbox (55.68495pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 any Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (147.144pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 max_distributed_per_day: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (86.5846pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 max_stock: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (61.80467pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 wait- Overfull \hbox (88.46458pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 ing_period: Overfull \hbox (51.8048pt too wide) in paragraph at lines 1161--1161 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 = Overfull \hbox (52.24501pt too wide) in paragraph at lines 1161--1161 \T1/ptm/m/it/10 0\T1/pcr/m/n/10 ) [18] Overfull \vbox (355.66753pt too high) has occurred while \output is active [19] [20] Overfull \hbox (31.21352pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 get: [][]ob-ject[][] Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 5203) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag-nos- Overfull \hbox (63.55446pt too wide) in paragraph at lines 1250--1250 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 tic_threshold: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 float[][] = 40\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 mea-sure- Overfull \hbox (1.01384pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 event_name: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Di-ag- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 nos-tic Sur-vey\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (27.58405pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 tive_diagnosis_configs: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 neg-a- Overfull \hbox (27.58405pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 tive_diagnosis_configs: Overfull \hbox (6.95406pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ceived_test_event: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ceived_Test\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 IP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 NP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ing_properties: Overfull \hbox (9.814pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 ing_duration: Overfull \hbox (29.97432pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1250--1250 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (47.68343pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 check_eligibility_at_trigger: Overfull \hbox (9.71407pt too wide) in paragraph at lines 1250--1250 \T1/ptm/m/it/10 pire_recent_drugs: [21] Underfull \hbox (badness 10000) in paragraph at lines 1283--1286 []\T1/pcr/b/n/10 diagnostic_type \T1/ptm/m/n/10 ^^U Type of malaria di-ag-nos-t ic used. De-fault is Underfull \hbox (badness 10000) in paragraph at lines 1325--1328 []\T1/ptm/m/n/10 In ga-me-to-cytes/microliter, use mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1348--1350 []\T1/pcr/b/n/10 measurement_sensitivity \T1/ptm/m/n/10 ^^U Set-ting for \T1/pt m/b/n/10 Mea-sure-ment_Sensitivity \T1/ptm/m/n/10 in [22] Underfull \hbox (badness 10000) in paragraph at lines 1371--1376 []\T1/pcr/b/n/10 IP_restrictions \T1/ptm/m/n/10 ^^U List of In-di-vid-u-al-Prop -erty key:value pairs that Underfull \hbox (badness 10000) in paragraph at lines 1371--1376 \T1/ptm/m/n/10 in-di-vid-u-als must have to re-ceive the di-ag-nos-tic in-ter-v en-tion. For Underfull \hbox (badness 10000) in paragraph at lines 1371--1376 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue 1"}, Underfull \hbox (badness 10000) in paragraph at lines 1378--1383 []\T1/pcr/b/n/10 NP_restrictions \T1/ptm/m/n/10 ^^U List of Node-Prop-erty key: value pairs Underfull \hbox (badness 10000) in paragraph at lines 1378--1383 \T1/ptm/m/n/10 that nodes must have to re-ceive the di-ag-nos-tic in-ter-ven-ti on. Underfull \hbox (badness 10000) in paragraph at lines 1378--1383 \T1/ptm/m/n/10 For ex-am-ple, \T1/pcr/m/n/10 [{"NodeProperty1":"PropertyValue1" }, Underfull \hbox (badness 10000) in paragraph at lines 1385--1389 []\T1/pcr/b/n/10 disqualifying_properties \T1/ptm/m/n/10 ^^U List of In-di-vid- u-al-Prop-erty Underfull \hbox (badness 10000) in paragraph at lines 1385--1389 \T1/ptm/m/n/10 key:value pairs that cause an in-ter-ven-tion to be aborted. For ex- Underfull \hbox (badness 10000) in paragraph at lines 1385--1389 \T1/ptm/m/n/10 am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue1"} , Underfull \hbox (badness 10000) in paragraph at lines 1408--1411 []\T1/pcr/b/n/10 expire_recent_drugs \T1/ptm/m/n/10 ^^U Adds \T1/pcr/m/n/10 [{" DrugStatus:None"}] \T1/ptm/m/n/10 to \T1/ptm/b/n/10 Prop- [23] Underfull \hbox (badness 10000) in paragraph at lines 1497--1497 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1497--1497 \T1/ptm/m/it/10 drug_code: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cam- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 paign_type: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 MDA\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6775) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: Overfull \hbox (19.21352pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 7344) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag- Overfull \hbox (51.55446pt too wide) in paragraph at lines 1528--1528 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 = 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 fmda_radius: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (6.22408pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 5667) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 balls: [][]int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 treat-ment_delay: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Overfull \hbox (17.97432pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 tar-get_group: Overfull \hbox (33.88365pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (33.19351pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (26.53346pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ing_properties: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ent_drug_configs: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 get_residents_only: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (35.68343pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 False\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Overfull \hbox (144.47322pt too wide) in paragraph at lines 1528--1528 \T1/ptm/m/it/10 ing_drugs_event_name=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Received _Campaign_Drugs\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) [24] [25] [26] Underfull \hbox (badness 10000) in paragraph at lines 1679--1682 []\T1/pcr/b/n/10 ind_property_restrictions \T1/ptm/m/n/10 ^^U The set-ting for \T1/ptm/b/n/10 Prop- Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (57.71327pt too wide) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e-ti-tions: [][]int[ ][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 6348) in paragraph at lines 1724--1724 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][] list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (86.50304pt too wide) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 6032) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 ing_properties: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1724--1724 \T1/ptm/m/it/10 trig-ger_condition_list: [][]list[][] = [27] Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 7504) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 treat-ment_delay: [][]int[ ][] Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure-ment_sensitivity: Underfull \hbox (badness 6063) in paragraph at lines 1739--1739 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [ ][]list[][] Overfull \hbox (92.50304pt too wide) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 1739--1739 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1740--1743 \T1/ptm/m/n/10 Add an MSAT (mass screen-ing and treat-ment) drug in-ter-ven-tio n to your cam-paign. See [28] Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 7221) in paragraph at lines 1754--1754 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [ ][]float[][] Underfull \hbox (badness 7595) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (92.50304pt too wide) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 7869) in paragraph at lines 1755--1758 \T1/ptm/m/n/10 Add an fMDA (fo-cal mass drug ad-min-is-tra-tion) drug in-ter-ve n-tion to your cam-paign. See Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 6141) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (75.71327pt too wide) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Overfull \hbox (9.55446pt too wide) in paragraph at lines 1769--1769 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (104.50304pt too wide) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1769--1769 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- [29] Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (69.71327pt too wide) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 7613) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_covera ge: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS-TANCE_ONLY\ TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 node_ids: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (98.50304pt too wide) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1784--1784 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1799--1799 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ev ent_trigger: [30] Underfull \hbox (badness 5756) in paragraph at lines 1831--1831 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 daily_eir: [][]list[][] Underfull \hbox (badness 5091) in paragraph at lines 1865--1865 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][]l ist[][] = None\T1/ptm/m/n/10 , [31] Underfull \hbox (badness 10000) in paragraph at lines 1905--1905 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1905--1905 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , [32] Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Overfull \hbox (11.51352pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (38.20403pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 killing_box_duration_days: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (98.1333pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 killing_exponential_decay_constant_days: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 int[][] = 90\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (13.73363pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 pelling_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (40.42413pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 pelling_box_duration_days: Underfull \hbox (badness 10000) in paragraph at lines 1978--1978 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Overfull \hbox (100.35341pt too wide) in paragraph at lines 1978--1978 \T1/ptm/m/it/10 pelling_exponential_decay_constant_days: [33] Underfull \hbox (badness 10000) in paragraph at lines 2038--2038 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n /10 , Underfull \hbox (badness 10000) in paragraph at lines 2047--2047 []\T1/ptm/m/it/10 schema_path_container\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2047--2047 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2047--2047 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 re-leased_number: Underfull \hbox (badness 5954) in paragraph at lines 2090--2090 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 leased_fraction: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 leased_infectious: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 leased_species: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 \T1/ptm/m/it/10 re-leased_genome: Underfull \hbox (badness 10000) in paragraph at lines 2090--2090 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , [34] Underfull \hbox (badness 10000) in paragraph at lines 2110--2112 []\T1/pcr/b/n/10 released_infectious \T1/ptm/m/n/10 ^^U The frac-tion of vec-to rs re-leased that Underfull \hbox (badness 10000) in paragraph at lines 2110--2112 \T1/ptm/m/n/10 are to be in-fec-tious. One can only use this fea-ture when Overfull \hbox (16.27205pt too wide) in paragraph at lines 2110--2112 \T1/ptm/m/n/10 `Malaria_Model'!='MALARIA_MECHANISTIC_MODEL_WITH_PARASITE_GENETI CS' Underfull \hbox (badness 10000) in paragraph at lines 2136--2136 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (16.35448pt too wide) in paragraph at lines 2136--2136 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2136--2136 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 2136--2136 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2136--2136 \T1/ptm/m/it/10 file- Overfull \hbox (2.35487pt too wide) in paragraph at lines 2136--2136 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [35] Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Overfull \hbox (2.73457pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (14.36418pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (52.97314pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (32.53346pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (39.19351pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 5359) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ig- Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 [][]\T1/ptm/m/it/10 bool[][] = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (16.02399pt too wide) in paragraph at lines 2162--2162 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5893) in paragraph at lines 2186--2188 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [36] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2241--2241 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 de-mo- Overfull \hbox (38.73457pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 float[][] = Overfull \hbox (50.36418pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (2.6847pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 tions: Overfull \hbox (88.97314pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , Overfull \hbox (68.53346pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (75.19351pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 tar- Overfull \hbox (17.93463pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Overfull \hbox (19.59468pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (11.3646pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 str[][] = Overfull \hbox (26.75435pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (52.02399pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5077) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = - Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cre- Overfull \hbox (90.54375pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 ate_nucleotide_sequence_from: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BAR- Overfull \hbox (33.99452pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 CODE_STRING\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 bar- Overfull \hbox (13.79442pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 code_string: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (52.88371pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 drug_resistant_string: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (43.23422pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 msp_variant_value: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (64.34395pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 pfemp1_variants_values: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 bar- Overfull \hbox (155.51305pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 code_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (194.60234pt too wide) in paragraph at lines 2241--2241 \T1/ptm/m/it/10 drug_resistant_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 2241--2241 [][]\T1/ptm/m/it/10 list[][] = [37] Overfull \vbox (135.66997pt too high) has occurred while \output is active [38] Underfull \hbox (badness 5893) in paragraph at lines 2268--2270 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [39] Overfull \hbox (11.18481pt too wide) in paragraph at lines 2357--2357 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 de-mo- Overfull \hbox (44.73457pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 float[][] Underfull \hbox (badness 8151) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tar- Overfull \hbox (56.36418pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tions: Overfull \hbox (94.97314pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.19351pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tar- Overfull \hbox (23.93463pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (25.59468pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tar- Overfull \hbox (17.3646pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 ig- Overfull \hbox (32.75435pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (58.02399pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Overfull \hbox (10.34447pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 irbc_type: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 mi- Overfull \hbox (42.5643pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 nor_epitope_type: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (10.3446pt too wide) in paragraph at lines 2357--2357 \T1/ptm/m/it/10 msp_type: Underfull \hbox (badness 10000) in paragraph at lines 2357--2357 [][]\T1/ptm/m/it/10 int[][] = [40] Overfull \vbox (3.66997pt too high) has occurred while \output is active [41] Underfull \hbox (badness 5893) in paragraph at lines 2384--2386 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e- Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (22.97314pt too wide) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (2.53346pt too wide) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (9.19351pt too wide) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2442--2442 \T1/ptm/m/it/10 get_age_min: [][]int[][] = [42] Underfull \hbox (badness 5893) in paragraph at lines 2468--2470 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [43] Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 \T1/ptm/m/it/10 cide_name: Overfull \hbox (29.51352pt too wide) in paragraph at lines 2509--2509 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (32.87419pt too wide) in paragraph at lines 2509--2509 \T1/ptm/m/it/10 killing_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (74.87367pt too wide) in paragraph at lines 2509--2509 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2509--2509 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2551--2551 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spray_coverage: [44] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2576--2576 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2576--2576 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2576--2576 \T1/ptm/m/it/10 file- Underfull \hbox (badness 10000) in paragraph at lines 2576--2576 \T1/ptm/m/it/10 name: Underfull \hbox (badness 10000) in paragraph at lines 2576--2576 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 6893) in paragraph at lines 2593--2593 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[] [] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2637--2637 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , [45] Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 tar-gets: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 drug: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.88365pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 6204) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du- Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 ra-tion: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 broad- Overfull \hbox (41.29442pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 cast_event_name: Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2657--2657 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Overfull \hbox (48.38399pt too wide) in paragraph at lines 2657--2657 \T1/ptm/m/it/10 ceived_Treatment\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 2673--2677 []\T1/pcr/b/n/10 of individuals to target with the intervention. Default is Underfull \hbox (badness 10000) in paragraph at lines 2673--2677 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 properties\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 [ { "trigger":"NewClinicalCase","coverage":0. Underfull \hbox (badness 10000) in paragraph at lines 2673--2677 \T1/pcr/m/n/10 8,"agemin":15,"agemax":70, "seek":0.4,"rate":0.3}, Underfull \hbox (badness 10000) in paragraph at lines 2673--2677 \T1/pcr/m/n/10 {"trigger":"NewSevereCase","coverage":0.8,"seek":0.6, Underfull \hbox (badness 10000) in paragraph at lines 2691--2692 []\T1/pcr/b/n/10 must have to receive the intervention. For example, Underfull \hbox (badness 10000) in paragraph at lines 2691--2692 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 individuals\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 ["IndividualProperty1:PropertyValue1", [46] Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis- Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 \T1/ptm/m/it/10 0.0013698630136986301\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_e ff: Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 \T1/ptm/m/it/10 0.0006849315068493151\T1/ptm/m/n/10 , \T1/ptm/m/it/10 iv_name: Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Us-ageDe-pen-de ntBed-net\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2721--2721 \T1/ptm/m/it/10 sonal_dependence: [][]dict[][] = None\T1/ptm/m/n/10 , [47] [48] Underfull \hbox (badness 10000) in paragraph at lines 2920--2920 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2920--2920 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [49] Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep- Underfull \hbox (badness 7273) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 e-ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (34.97314pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (14.53346pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (21.19351pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 7667) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 broad- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 cast_event: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac-cine_type: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ac-qui-si-tion- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 Block-ing\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac - Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 vac-cine_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac- Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 cine_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 vac- Overfull \hbox (29.97394pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 cine_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2931--2931 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ef-fi- Overfull \hbox (2.56361pt too wide) in paragraph at lines 2931--2931 \T1/ptm/m/it/10 cacy_is_multiplicative: [50] Underfull \hbox (badness 5893) in paragraph at lines 2957--2959 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 3019--3019 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3019--3019 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [51] Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 clude_vector_state: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 ify_by: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 GENOME\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 com- Overfull \hbox (9.02399pt too wide) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 bine_similar_genomes: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spe- Overfull \hbox (102.76315pt too wide) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 cific_genome_combinations_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Overfull \hbox (64.54318pt too wide) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 lele_combinations_for_stratification: Overfull \hbox (2.32376pt too wide) in paragraph at lines 3054--3054 \T1/ptm/m/it/10 les_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 3054--3054 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [52] Underfull \hbox (badness 10000) in paragraph at lines 3134--3134 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 6893) in paragraph at lines 3153--3153 \T1/ptm/m/it/10 = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 \T1/ptm/m/it/10 ual_property_filter: Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 in-fec- Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 \T1/ptm/m/it/10 tious-ness_bins: Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (4.30418pt too wide) in paragraph at lines 3153--3153 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 7291) in paragraph at lines 3153--3153 [][]\T1/ptm/m/it/10 int[][] = 100\T1/ptm/m/n/10 , \T1/ptm/m/it/10 par-a- Underfull \hbox (badness 10000) in paragraph at lines 3153--3153 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [53] Underfull \hbox (badness 10000) in paragraph at lines 3214--3214 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i- Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 nodes: Overfull \hbox (3.20416pt too wide) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 pretty_format: Overfull \hbox (15.2441pt too wide) in paragraph at lines 3230--3230 \T1/ptm/m/it/10 port_description: [54] Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re-port-Malar- Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 i-aFil-tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 min_age_years: Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 max_age_years: Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 [][]\T1/ptm/m/it/10 float[][] = 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 has_interventions: Overfull \hbox (74.41385pt too wide) in paragraph at lines 3270--3270 \T1/ptm/m/it/10 clude_30day_avg_infection_duration: [55] Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 start_day: Overfull \hbox (6.45485pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 re-port- Overfull \hbox (21.46431pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 re- Overfull \hbox (28.1245pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 port_filename: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Spa- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 tial-Re- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 port- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 Malar- Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 i-aFil- Overfull \hbox (13.23434pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 spa- Overfull \hbox (56.87419pt too wide) in paragraph at lines 3320--3320 \T1/ptm/m/it/10 tial_output_channels: Underfull \hbox (badness 10000) in paragraph at lines 3320--3320 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 ^^PBlood_Smear_Gametocyte_Prevalence^^Q, ^^PBlood_Smear_Parasite _Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 ^^PCam-paign_Cost^^Q, ^^PDaily_Bites_Per_Human^^Q, ^^PDaily_EIR^ ^Q, ^^PDis-ease_Deaths^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 ^^PNew_Reported_Infections^^Q, ^^PNew_Severe_Cases^^Q, ^^PPCR_Ga metocyte_Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 ^^PPCR_Parasite_Prevalence^^Q, ^^PPfHRP2_Prevalence^^Q, ^^PPop-u -la-tion^^Q, ^^PPreva- Underfull \hbox (badness 10000) in paragraph at lines 3348--3356 \T1/ptm/m/n/10 lence^^Q, ^^PRain-fall^^Q, ^^PRel-a-tive_Humidity^^Q, ^^PTrue_Pr evalence^^Q De-faults: [56] Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 6893) in paragraph at lines 3369--3369 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3369--3369 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3390--3390 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 3390--3390 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- Underfull \hbox (badness 10000) in paragraph at lines 3390--3390 \T1/ptm/m/it/10 clude_infection_table: Underfull \hbox (badness 10000) in paragraph at lines 3390--3390 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- [57] Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 re-port-ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Overfull \hbox (10.30418pt too wide) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3452--3452 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 port-ing_interval: Overfull \hbox (10.30418pt too wide) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (20.78384pt too wide) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 3502--3502 \T1/ptm/m/it/10 port_description: [58] [59] Underfull \hbox (badness 10000) in paragraph at lines 3607--3607 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3607--3607 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (26.78384pt too wide) in paragraph at lines 3607--3607 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 6526) in paragraph at lines 3607--3607 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3607--3607 \T1/ptm/m/it/10 ify_by_gender: Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (14.48471pt too wide) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 in-di- Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 vid- Overfull \hbox (74.78384pt too wide) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 [][]\T1/ptm/m/it/10 str[][] Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 strat- Overfull \hbox (35.68442pt too wide) in paragraph at lines 3641--3641 \T1/ptm/m/it/10 ify_by_gender: [60] Overfull \hbox (47.85474pt too wide) in paragraph at lines 3675--3675 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (49.79494pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 man- Overfull \hbox (35.35486pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 i- Overfull \hbox (45.63463pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (46.26491pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 bar- Overfull \hbox (55.34474pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 codes: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (122.7736pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 drug_resistant_strings: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (148.3231pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 drug_resistant_statistic_type: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (240.52356pt too wide) in paragraph at lines 3675--3675 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 NUM_PEOPLE_WITH_RESISTANT_INFECTION\TS1/ptm/m /it/10 '\T1/ptm/m/n/10 , Overfull \hbox (68.48471pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 age_bins: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (40.35486pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 in- Overfull \hbox (40.35486pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 di- Overfull \hbox (44.7948pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 vid- Overfull \hbox (128.78384pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 ual_property_to_collect: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (36.0248pt too wide) in paragraph at lines 3675--3675 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Overfull \hbox (50.76463pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 strat- Overfull \hbox (89.68442pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 ify_by_gender: Overfull \hbox (39.8048pt too wide) in paragraph at lines 3675--3675 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 = Overfull \hbox (40.24501pt too wide) in paragraph at lines 3675--3675 \T1/ptm/m/it/10 1\T1/pcr/m/n/10 ) [61] Underfull \hbox (badness 10000) in paragraph at lines 3726--3726 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Overfull \hbox (17.85474pt too wide) in paragraph at lines 3755--3755 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (19.79494pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 man- Overfull \hbox (5.35486pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 i- Overfull \hbox (15.63463pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (48.68404pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 species_list: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (22.85487pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (20.76463pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 strat- Overfull \hbox (60.89413pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 ify_by_species: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 in- Overfull \hbox (70.75449pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 clude_wolbachia: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 in- Overfull \hbox (65.80426pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 clude_gestation: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (16.26491pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 bar- Overfull \hbox (25.34474pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 codes: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3755--3755 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 = Overfull \hbox (26.35487pt too wide) in paragraph at lines 3755--3755 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [62] Underfull \hbox (badness 10000) in paragraph at lines 3795--3795 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 event_list\T1/ptm/m/n/10 , Overfull \hbox (6.34352pt too wide) in paragraph at lines 3795--3795 \T1/ptm/m/it/10 only_include_events_in_list=True\T1/ptm/m/n/10 , [63] Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 36500000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 re- Overfull \hbox (15.2441pt too wide) in paragraph at lines 3823--3823 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 3823--3823 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3858--3858 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3858--3858 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 3858--3858 \T1/ptm/m/it/10 En-abled: bool = [64] Underfull \hbox (badness 10000) in paragraph at lines 3906--3906 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3906--3906 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 3906--3906 \T1/ptm/m/it/10 En-abled: bool = Underfull \hbox (badness 10000) in paragraph at lines 3930--3930 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3930--3930 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3930--3930 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 3930--3930 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (55.2345pt too wide) in paragraph at lines 3955--3955 []\T1/ptm/m/it/10 class_name: Overfull \hbox (15.80469pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 str Overfull \hbox (11.99501pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 = Overfull \hbox (28.85487pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (18.57497pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 pa- Overfull \hbox (24.53493pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 ram- Overfull \hbox (13.01491pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 e- Overfull \hbox (23.4746pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 ters: Overfull \hbox (20.24474pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 dict Overfull \hbox (11.99501pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 = Overfull \hbox (27.5448pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (19.68495pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 En- Overfull \hbox (30.7948pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 abled: Overfull \hbox (23.0249pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 = Overfull \hbox (26.08485pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (66.5943pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (23.0249pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 = Overfull \hbox (29.58485pt too wide) in paragraph at lines 3955--3955 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) [65] Underfull \hbox (badness 5832) in paragraph at lines 3958--3963 \T1/ptm/m/n/10 The re-port can only be used when the sim-u-la-tion setup pa-ram -e-ter \T1/ptm/b/n/10 Malaria_Model \T1/ptm/m/n/10 is set to Underfull \hbox (badness 10000) in paragraph at lines 3980--3980 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 3980--3980 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 3980--3980 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 3980--3980 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 3980--3980 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 4004--4004 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4004--4004 \T1/ptm/m/it/10 bool = [66] Underfull \hbox (badness 10000) in paragraph at lines 4029--4029 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 4029--4029 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 6236) in paragraph at lines 4077--4077 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 4077--4077 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4077--4077 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , [67] Underfull \hbox (badness 10000) in paragraph at lines 4101--4101 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4101--4101 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4101--4101 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4101--4101 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4101--4101 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4130--4130 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4130--4130 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4130--4130 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4130--4130 \T1/ptm/m/it/10 En-abled: Overfull \hbox (6.5943pt too wide) in paragraph at lines 4130--4130 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 4174--4174 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 4174--4174 \T1/ptm/m/it/10 bool = [68] Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 str = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 bool = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4198--4198 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (19.2345pt too wide) in paragraph at lines 4221--4221 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 e-ters: Underfull \hbox (badness 8151) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 dict = Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 abled: Underfull \hbox (badness 10000) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (30.5943pt too wide) in paragraph at lines 4221--4221 \T1/ptm/m/it/10 Pretty_Format: [69] Overfull \hbox (67.2345pt too wide) in paragraph at lines 4249--4249 []\T1/ptm/m/it/10 class_name: Overfull \hbox (27.80469pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 str Overfull \hbox (23.99501pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 = Overfull \hbox (40.85487pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (30.57497pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 pa- Overfull \hbox (36.53493pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 ram- Overfull \hbox (25.01491pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 e- Overfull \hbox (35.4746pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 ters: Overfull \hbox (32.24474pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 dict Overfull \hbox (23.99501pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 = Overfull \hbox (39.5448pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (31.68495pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 En- Overfull \hbox (42.7948pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 abled: Overfull \hbox (35.0249pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 = Overfull \hbox (38.08485pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (78.5943pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (35.0249pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 = Overfull \hbox (41.58485pt too wide) in paragraph at lines 4249--4249 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 4277--4277 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 4277--4277 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 4277--4277 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 4277--4277 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 4277--4277 \T1/ptm/m/it/10 Pretty_Format: [70] Overfull \hbox (37.2345pt too wide) in paragraph at lines 4301--4301 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 str Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 = Overfull \hbox (10.85487pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (0.57497pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 pa- Overfull \hbox (6.53493pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 ram- Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 e- Overfull \hbox (5.4746pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 ters: Overfull \hbox (2.24474pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 dict Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 = Overfull \hbox (9.5448pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (1.68495pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 En- Overfull \hbox (12.7948pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 abled: Overfull \hbox (5.0249pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 = Overfull \hbox (8.08485pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (48.5943pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (5.0249pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 = Overfull \hbox (11.58485pt too wide) in paragraph at lines 4301--4301 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 10000) in paragraph at lines 4326--4326 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 4326--4326 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4326--4326 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 4326--4326 \T1/ptm/m/it/10 Pretty_Format: [71] Underfull \hbox (badness 10000) in paragraph at lines 4383--4383 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , Overfull \hbox (24.52415pt too wide) in paragraph at lines 4383--4383 \T1/ptm/m/it/10 var_gene_randomness_type: Underfull \hbox (badness 10000) in paragraph at lines 4383--4383 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 4384--4386 \T1/ptm/m/n/10 Sets up the de-fault pa-ram-e-ters for par-a-site ge-net-ics sim -u-la-tions Malaria_Model = [72] Underfull \hbox (badness 10000) in paragraph at lines 4524--4524 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 species_name: Underfull \hbox (badness 10000) in paragraph at lines 4524--4524 [][]\T1/ptm/m/it/10 str[][]\T1/ptm/m/n/10 , \T1/ptm/m/it/10 habi-tat_type: [][] str[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7631) in paragraph at lines 4525--4528 \T1/ptm/m/n/10 Set the Max_Larval_Capacity for a given species and habi-tat. Ef -fec-tively do-ing some-thing [73] [74] [75] Underfull \hbox (badness 10000) in paragraph at lines 4862--4862 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , \T1/ptm/m/it/10 in-sec- Underfull \hbox (badness 6675) in paragraph at lines 4862--4862 \T1/ptm/m/it/10 ti-cide_name: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 5939) in paragraph at lines 4862--4862 \T1/ptm/m/it/10 species: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 al- Underfull \hbox (badness 6047) in paragraph at lines 4862--4862 \T1/ptm/m/it/10 block-ing: [][]float[][] = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4862--4862 \T1/ptm/m/it/10 pelling: [][]float[][] = 1.0\T1/ptm/m/n/10 , [76] Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 \T1/ptm/m/it/10 driver_type: [][]str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 CL AS-SIC\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 shred-ding_allele_required : Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al-lele_shredding_fraction : Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 [][]\T1/ptm/m/it/10 float[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Underfull \hbox (badness 10000) in paragraph at lines 4932--4932 \T1/ptm/m/it/10 lele_to_shred_to_surviving_fraction: [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 5064--5064 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 species_name\T1/ptm/m/ n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5064--5064 \T1/ptm/m/it/10 habi-tat_type\T1/ptm/m/n/10 , Underfull \hbox (badness 7631) in paragraph at lines 5065--5068 \T1/ptm/m/n/10 Set the Max_Larval_Capacity for a given species and habi-tat. Ef -fec-tively do-ing some-thing [79] [80] Overfull \hbox (54.6225pt too wide) in paragraph at lines 5099--5100 []\T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 , Overfull \hbox (84.6225pt too wide) in paragraph at lines 5103--5104 []\T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/m/ n/10 , Overfull \hbox (12.6225pt too wide) in paragraph at lines 5104--5105 []\T1/pcr/m/n/10 emodpy_malaria.interventions.diag_survey\T1/ptm/m/n/10 , Overfull \hbox (24.6225pt too wide) in paragraph at lines 5106--5107 []\T1/pcr/m/n/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5107--5108 []\T1/pcr/m/n/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 , Overfull \hbox (6.6225pt too wide) in paragraph at lines 5109--5110 []\T1/pcr/m/n/10 emodpy_malaria.interventions.ivermectin\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 5110--5111 []\T1/pcr/m/n/10 emodpy_malaria.interventions.mosquitorelease\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5111--5112 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 5112--5113 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outdoorrestkill\T1/ptm/m/n/10 , Overfull \hbox (24.6225pt too wide) in paragraph at lines 5113--5114 []\T1/pcr/m/n/10 emodpy_malaria.interventions.spacespraying\T1/ptm/m/n/10 , Overfull \hbox (0.6225pt too wide) in paragraph at lines 5114--5115 []\T1/pcr/m/n/10 emodpy_malaria.interventions.sugartrap\T1/ptm/m/n/10 , Overfull \hbox (48.6225pt too wide) in paragraph at lines 5115--5116 []\T1/pcr/m/n/10 emodpy_malaria.interventions.treatment_seeking\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5116--5117 []\T1/pcr/m/n/10 emodpy_malaria.interventions.udbednet\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5117--5118 []\T1/pcr/m/n/10 emodpy_malaria.interventions.vaccine\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 5119--5120 []\T1/pcr/m/n/10 emodpy_malaria.malaria_vector_species_params\T1/ptm/m/n/10 , [81] (./institute-for-disease-modeling-emodpy-malaria.ind [82] Underfull \hbox (badness 10000) in paragraph at lines 8--10 []\T1/pcr/m/n/10 add_campaign_event() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 8--10 \T1/ptm/m/it/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Overfull \hbox (48.28003pt too wide) in paragraph at lines 10--12 \T1/ptm/m/it/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/m/n /10 ), Underfull \hbox (badness 10000) in paragraph at lines 12--14 []\T1/pcr/m/n/10 add_diagnostic_survey() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Underfull \hbox (badness 10000) in paragraph at lines 12--14 \T1/ptm/m/it/10 emodpy_malaria.interventions.diag_survey\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 14--16 []\T1/pcr/m/n/10 add_drug_campaign() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 14--16 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 16--18 []\T1/pcr/m/n/10 add_drug_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 18--20 []\T1/pcr/m/n/10 add_drug_status_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Underfull \hbox (badness 10000) in paragraph at lines 20--22 []\T1/pcr/m/n/10 add_event_recorder() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/pcr/m/n/10 add_fMDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 22--24 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 24--26 []\T1/pcr/m/n/10 add_genes_and_alleles() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Underfull \hbox (badness 10000) in paragraph at lines 28--30 []\T1/pcr/m/n/10 add_InputEIR() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 28--30 \T1/ptm/m/it/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 30--32 []\T1/pcr/m/n/10 add_insecticide_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 32--34 []\T1/pcr/m/n/10 add_insecticide_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 36--38 []\T1/pcr/m/n/10 add_ITN() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 38--40 []\T1/pcr/m/n/10 add_ITN_scheduled() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 40--42 []\T1/pcr/m/n/10 add_ITN_triggered() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 42--44 []\T1/pcr/m/n/10 add_larval_habitat_multiplier() Overfull \hbox (127.95007pt too wide) in paragraph at lines 42--44 \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics .MalariaDemographics Underfull \hbox (badness 10000) in paragraph at lines 46--48 []\T1/pcr/m/n/10 add_malaria_patient_json_report() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 48--50 []\T1/pcr/m/n/10 add_malaria_sql_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Underfull \hbox (badness 10000) in paragraph at lines 50--52 []\T1/pcr/m/n/10 add_malaria_summary_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 54--56 []\T1/pcr/m/n/10 add_malaria_transmission_report() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 56--58 []\T1/pcr/m/n/10 add_MDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 56--58 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 58--60 []\T1/pcr/m/n/10 add_MSAT() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 58--60 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 60--62 []\T1/pcr/m/n/10 add_mutation() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 62--64 []\T1/pcr/m/n/10 add_outbreak_individual() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in m od-ule Underfull \hbox (badness 10000) in paragraph at lines 62--64 \T1/ptm/m/it/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 64--66 \T1/ptm/m/it/10 ule emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 66--68 \T1/ptm/m/it/10 ule emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 68--70 []\T1/pcr/m/n/10 add_OutdoorRestKill() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 70--72 []\T1/pcr/m/n/10 add_report_event_counter() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 72--74 []\T1/pcr/m/n/10 add_report_intervention_pop_avg() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/pcr/m/n/10 add_report_node_demographics_malaria() [83] Overfull \hbox (52.1225pt too wide) in paragraph at lines 80--82 []\T1/pcr/m/n/10 add_report_node_demographics_malaria_genetics() Underfull \hbox (badness 10000) in paragraph at lines 82--84 []\T1/pcr/m/n/10 add_report_vector_genetics() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 86--88 []\T1/pcr/m/n/10 add_report_vector_stats() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in m od-ule Overfull \hbox (22.1225pt too wide) in paragraph at lines 88--90 []\T1/pcr/m/n/10 add_report_vector_stats_malaria_genetics() Underfull \hbox (badness 10000) in paragraph at lines 90--92 []\T1/pcr/m/n/10 add_rfMDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 90--92 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 92--94 []\T1/pcr/m/n/10 add_rfMSAT() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 92--94 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 94--96 []\T1/pcr/m/n/10 add_scheduled_vaccine() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Underfull \hbox (badness 10000) in paragraph at lines 94--96 \T1/ptm/m/it/10 emodpy_malaria.interventions.vaccine\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 96--98 []\T1/pcr/m/n/10 add_spatial_report_malaria_filtered() Underfull \hbox (badness 10000) in paragraph at lines 98--100 []\T1/pcr/m/n/10 add_species() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 100--102 []\T1/pcr/m/n/10 add_species() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 102--104 []\T1/pcr/m/n/10 add_species_drivers() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 104--105 []\T1/pcr/m/n/10 add_trait() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 105--107 []\T1/pcr/m/n/10 add_treatment_seeking() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Overfull \hbox (13.89015pt too wide) in paragraph at lines 105--107 \T1/ptm/m/it/10 emodpy_malaria.interventions.treatment_seeking\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 107--109 []\T1/pcr/m/n/10 add_vector_habitat_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 109--111 []\T1/pcr/m/n/10 AntimalarialDrug() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 109--111 \T1/ptm/m/it/10 emodpy_malaria.interventions.common\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 111--113 []\T1/pcr/m/n/10 AntimalarialDrug() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 116--118 []\T1/pcr/m/n/10 BasicBednet() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 118--120 []\T1/pcr/m/n/10 Bednet() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 120--122 []\T1/pcr/m/n/10 BednetIntervention() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Overfull \hbox (59.0599pt too wide) in paragraph at lines 125--127 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaImmunityReport Overfull \hbox (72.70978pt too wide) in paragraph at lines 127--129 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaPatientJSONReport Overfull \hbox (34.07018pt too wide) in paragraph at lines 129--131 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSqlReport Overfull \hbox (59.06006pt too wide) in paragraph at lines 131--133 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSummaryReport Overfull \hbox (79.58981pt too wide) in paragraph at lines 133--135 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSurveyJSONAnalyzer Overfull \hbox (34.07019pt too wide) in paragraph at lines 135--137 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportDrugStatus Overfull \hbox (44.06006pt too wide) in paragraph at lines 137--139 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportEventCounter Overfull \hbox (93.57004pt too wide) in paragraph at lines 139--141 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportHumanMigrationTracking Overfull \hbox (67.70004pt too wide) in paragraph at lines 141--143 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportInterventionPopAvg Overfull \hbox (52.68974pt too wide) in paragraph at lines 143--145 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportMalariaFiltered Overfull \hbox (68.25012pt too wide) in paragraph at lines 145--147 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographics Overfull \hbox (101.02975pt too wide) in paragraph at lines 147--149 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographicsMalaria Overfull \hbox (136.01923pt too wide) in paragraph at lines 149--151 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographicsMalariaGenetics Overfull \hbox (125.03925pt too wide) in paragraph at lines 151--153 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportSimpleMalariaTransmissionJSON Overfull \hbox (49.04977pt too wide) in paragraph at lines 153--155 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportVectorGenetics Overfull \hbox (54.46992pt too wide) in paragraph at lines 155--157 []\T1/pcr/m/n/10 config() 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Underfull \hbox (badness 10000) in paragraph at lines 232--234 []\T1/pcr/m/n/10 from_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (36.54083pt too wide) in paragraph at lines 232--234 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 234--236 []\T1/pcr/m/n/10 from_pop_csv() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (36.54083pt too wide) in paragraph at lines 234--236 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 236--238 []\T1/pcr/m/n/10 from_template_node() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Overfull \hbox (36.54083pt too wide) in paragraph at lines 236--238 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 241--243 []\T1/pcr/m/n/10 get_drug_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 243--245 []\T1/pcr/m/n/10 get_file_from_http() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 245--247 []\T1/pcr/m/n/10 get_species_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 247--249 []\T1/pcr/m/n/10 get_species_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 252--254 []\T1/pcr/m/n/10 InputEIR() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 252--254 \T1/ptm/m/it/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 254--256 []\T1/pcr/m/n/10 Ivermectin() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 254--256 \T1/ptm/m/it/10 emodpy_malaria.interventions.ivermectin\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 259--261 []\T1/pcr/m/n/10 MalariaDemographics \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Overfull \hbox (36.54083pt too wide) in paragraph at lines 259--261 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 261--263 []\T1/pcr/m/n/10 MalariaDiagnostic() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 261--263 \T1/ptm/m/it/10 emodpy_malaria.interventions.common\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 263--265 []\T1/pcr/m/n/10 MalariaImmunityReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 265--267 []\T1/pcr/m/n/10 MalariaPatientJSONReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 267--269 []\T1/pcr/m/n/10 MalariaSqlReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 269--271 []\T1/pcr/m/n/10 MalariaSummaryReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 271--273 []\T1/pcr/m/n/10 MalariaSurveyJSONAnalyzer \T1/ptm/m/n/10 (\T1/ptm/m/it/10 clas s in Overfull \hbox (74.6225pt too wide) in paragraph at lines 276--277 []| \T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/1 0 , Overfull \hbox (2.6225pt too wide) in paragraph at lines 278--279 []| \T1/pcr/m/n/10 emodpy_malaria.interventions.bednet\T1/ptm/m/n/10 , Overfull \hbox (2.6225pt too wide) in paragraph at lines 279--280 []| \T1/pcr/m/n/10 emodpy_malaria.interventions.common\T1/ptm/m/n/10 , [85] Overfull \hbox (104.6225pt too wide) in paragraph at lines 280--281 []| \T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/ m/n/10 , Overfull \hbox (32.6225pt too wide) in paragraph at lines 281--282 []| \T1/pcr/m/n/10 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ReportNodeDemographicsMalariaGenetics Underfull \hbox (badness 10000) in paragraph at lines 387--389 []\T1/pcr/m/n/10 ReportSimpleMalariaTransmissionJSON Underfull \hbox (badness 10000) in paragraph at lines 389--391 []\T1/pcr/m/n/10 ReportVectorGenetics \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 391--393 []\T1/pcr/m/n/10 ReportVectorMigration \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 393--395 []\T1/pcr/m/n/10 ReportVectorStats \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 400--402 []\T1/pcr/m/n/10 set_drug_param() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 402--404 []\T1/pcr/m/n/10 set_max_larval_capacity() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in m od-ule Underfull \hbox (badness 10000) in paragraph at lines 404--406 []\T1/pcr/m/n/10 set_max_larval_capacity() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in m od-ule Overfull \hbox (179.8501pt too wide) in paragraph at lines 408--410 []\T1/pcr/m/n/10 set_risk_high() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria .demographics.MalariaDemographics.MalariaDemographics Underfull \hbox (badness 10000) in paragraph at lines 410--412 []\T1/pcr/m/n/10 set_risk_lowmedium() Overfull \hbox (127.95007pt too wide) in paragraph at lines 410--412 \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics .MalariaDemographics Underfull \hbox (badness 10000) in paragraph at lines 412--414 []\T1/pcr/m/n/10 set_species_param() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 414--416 []\T1/pcr/m/n/10 set_species_param() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 416--418 []\T1/pcr/m/n/10 set_team_defaults() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 418--420 []\T1/pcr/m/n/10 set_team_defaults() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 420--422 []\T1/pcr/m/n/10 set_team_drug_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod- ule Underfull \hbox (badness 10000) in paragraph at lines 422--424 []\T1/pcr/m/n/10 SpaceSpraying() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 422--424 \T1/ptm/m/it/10 emodpy_malaria.interventions.spacespraying\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 424--426 []\T1/pcr/m/n/10 SpatialReportMalariaFiltered \T1/ptm/m/n/10 (\T1/ptm/m/it/10 c lass in Underfull \hbox (badness 10000) in paragraph at lines 426--428 []\T1/pcr/m/n/10 species_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (16.61057pt too wide) in paragraph at lines 426--428 \T1/ptm/m/it/10 emodpy_malaria.malaria_vector_species_params\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 428--430 []\T1/pcr/m/n/10 SugarTrap() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 428--430 \T1/ptm/m/it/10 emodpy_malaria.interventions.sugartrap\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 433--435 \T1/ptm/m/it/10 ule emodpy_malaria.interventions.common\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 438--440 []\T1/pcr/m/n/10 UDBednet() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 438--440 \T1/ptm/m/it/10 emodpy_malaria.interventions.udbednet\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 443--445 []\T1/pcr/m/n/10 VectorHabitatReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in [87]) (./institute-for-disease-modeling-emodpy-malaria.aux) ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on institute-for-disease-modeling-emodpy-malaria.pdf (91 pages, 344646 bytes). 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