Read the Docs build information Build id: 765129 Project: cyverse-visual-interactive-computing-environment Version: latest Commit: 216b1d62a7cbfe7914a8fb715f846c2cfc5fa8d0 Date: 2021-11-04T21:17:31.718556Z State: finished Success: False [rtd-command-info] start-time: 2021-11-04T21:17:33.673056Z, end-time: 2021-11-04T21:17:41.903942Z, duration: 8, exit-code: 0 git clone --no-single-branch --depth 50 https://github.com/CyVerse-learning-materials/Visual_Interactive_Computing_Environment.git . Cloning into '.'... [rtd-command-info] start-time: 2021-11-04T21:17:42.080827Z, end-time: 2021-11-04T21:17:42.437847Z, duration: 0, exit-code: 0 git checkout --force origin/master Note: checking out 'origin/master'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at 216b1d6 Delete buildenv directory [rtd-command-info] start-time: 2021-11-04T21:17:42.588035Z, end-time: 2021-11-04T21:17:42.653515Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2021-11-04T21:17:44.035623Z, end-time: 2021-11-04T21:17:48.414208Z, duration: 4, exit-code: 0 python2.7 -mvirtualenv New python executable in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/bin/python2.7 Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/bin/python Installing setuptools, pip, wheel... done. [rtd-command-info] start-time: 2021-11-04T21:17:48.530285Z, end-time: 2021-11-04T21:17:50.259269Z, duration: 1, exit-code: 0 python -m pip install --upgrade --no-cache-dir pip setuptools DEPRECATION: Python 2.7 reached the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 is no longer maintained. pip 21.0 will drop support for Python 2.7 in January 2021. More details about Python 2 support in pip can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support pip 21.0 will remove support for this functionality. Requirement already up-to-date: pip in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (20.3.4) Requirement already up-to-date: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (44.1.1) [rtd-command-info] start-time: 2021-11-04T21:17:50.371520Z, end-time: 2021-11-04T21:17:58.741611Z, duration: 8, exit-code: 0 python -m pip install --upgrade --no-cache-dir mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<2.2 DEPRECATION: Python 2.7 reached the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 is no longer maintained. pip 21.0 will drop support for Python 2.7 in January 2021. More details about Python 2 support in pip can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support pip 21.0 will remove support for this functionality. Collecting mock==1.0.1 Downloading mock-1.0.1.tar.gz (818 kB) Collecting pillow==5.4.1 Downloading Pillow-5.4.1-cp27-cp27mu-manylinux1_x86_64.whl (2.0 MB) Collecting alabaster!=0.7.5,<0.8,>=0.7 Downloading alabaster-0.7.12-py2.py3-none-any.whl (14 kB) Collecting commonmark==0.8.1 Downloading commonmark-0.8.1-py2.py3-none-any.whl (47 kB) Collecting recommonmark==0.5.0 Downloading recommonmark-0.5.0-py2.py3-none-any.whl (9.8 kB) Collecting sphinx<2 Downloading Sphinx-1.8.5-py2.py3-none-any.whl (3.1 MB) Collecting sphinx-rtd-theme<0.5 Downloading sphinx_rtd_theme-0.4.3-py2.py3-none-any.whl (6.4 MB) Collecting readthedocs-sphinx-ext<2.2 Downloading readthedocs_sphinx_ext-2.1.4-py2.py3-none-any.whl (29 kB) Collecting future Downloading future-0.18.2.tar.gz (829 kB) Collecting docutils>=0.11 Downloading docutils-0.18-py2.py3-none-any.whl (569 kB) Collecting imagesize Downloading imagesize-1.2.0-py2.py3-none-any.whl (4.8 kB) Collecting typing; python_version < "3.5" Downloading typing-3.10.0.0-py2-none-any.whl (26 kB) Collecting Pygments>=2.0 Downloading Pygments-2.5.2-py2.py3-none-any.whl (896 kB) Collecting Jinja2>=2.3 Downloading Jinja2-2.11.3-py2.py3-none-any.whl (125 kB) Collecting packaging Downloading packaging-20.9-py2.py3-none-any.whl (40 kB) Collecting snowballstemmer>=1.1 Downloading snowballstemmer-2.1.0-py2.py3-none-any.whl (93 kB) Requirement already satisfied, skipping upgrade: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from sphinx<2) (44.1.1) Collecting babel!=2.0,>=1.3 Downloading Babel-2.9.1-py2.py3-none-any.whl (8.8 MB) Collecting six>=1.5 Downloading six-1.16.0-py2.py3-none-any.whl (11 kB) Collecting requests>=2.0.0 Downloading requests-2.26.0-py2.py3-none-any.whl (62 kB) Collecting sphinxcontrib-websupport Downloading sphinxcontrib_websupport-1.1.2-py2.py3-none-any.whl (39 kB) Collecting MarkupSafe>=0.23 Downloading MarkupSafe-1.1.1-cp27-cp27mu-manylinux1_x86_64.whl (24 kB) Collecting pyparsing>=2.0.2 Downloading pyparsing-2.4.7-py2.py3-none-any.whl (67 kB) Collecting pytz>=2015.7 Downloading pytz-2021.3-py2.py3-none-any.whl (503 kB) Collecting certifi>=2017.4.17 Downloading certifi-2021.10.8-py2.py3-none-any.whl (149 kB) Collecting urllib3<1.27,>=1.21.1 Downloading urllib3-1.26.7-py2.py3-none-any.whl (138 kB) Collecting chardet<5,>=3.0.2; python_version < "3" Downloading chardet-4.0.0-py2.py3-none-any.whl (178 kB) Collecting idna<3,>=2.5; python_version < "3" Downloading idna-2.10-py2.py3-none-any.whl (58 kB) Building wheels for collected packages: mock, future Building wheel for mock (setup.py): started Building wheel for mock (setup.py): finished with status 'done' Created wheel for mock: filename=mock-1.0.1-py2-none-any.whl size=23754 sha256=74e63cab441552a83fe30d97af90cf26df8507f2a3831f31ad6a163687096888 Stored in directory: /tmp/pip-ephem-wheel-cache-KgmkqJ/wheels/ad/62/e0/a06cc957652749e64c7904e899eca3ecb2ec47c60d52653660 Building wheel for future (setup.py): started Building wheel for future (setup.py): finished with status 'done' Created wheel for future: filename=future-0.18.2-py2-none-any.whl size=502567 sha256=9c6a8887d25bf66ba4ad2e876f53d307f98a85455acee31fc23c0933bf5feeaa Stored in directory: /tmp/pip-ephem-wheel-cache-KgmkqJ/wheels/5f/11/0c/aad680baf5ef4fbcbab992c9f03e1130357e0c173a4fdabfff Successfully built mock future Installing collected packages: mock, pillow, alabaster, future, commonmark, imagesize, typing, Pygments, docutils, MarkupSafe, Jinja2, pyparsing, packaging, snowballstemmer, pytz, babel, six, certifi, urllib3, chardet, idna, requests, sphinxcontrib-websupport, sphinx, recommonmark, sphinx-rtd-theme, readthedocs-sphinx-ext Successfully installed Jinja2-2.11.3 MarkupSafe-1.1.1 Pygments-2.5.2 alabaster-0.7.12 babel-2.9.1 certifi-2021.10.8 chardet-4.0.0 commonmark-0.8.1 docutils-0.18 future-0.18.2 idna-2.10 imagesize-1.2.0 mock-1.0.1 packaging-20.9 pillow-5.4.1 pyparsing-2.4.7 pytz-2021.3 readthedocs-sphinx-ext-2.1.4 recommonmark-0.5.0 requests-2.26.0 six-1.16.0 snowballstemmer-2.1.0 sphinx-1.8.5 sphinx-rtd-theme-0.4.3 sphinxcontrib-websupport-1.1.2 typing-3.10.0.0 urllib3-1.26.7 [rtd-command-info] start-time: 2021-11-04T21:17:58.867541Z, end-time: 2021-11-04T21:18:11.162069Z, duration: 12, exit-code: 0 python -m pip install --exists-action=w --no-cache-dir -r requirements.txt DEPRECATION: Python 2.7 reached the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 is no longer maintained. pip 21.0 will drop support for Python 2.7 in January 2021. More details about Python 2 support in pip can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support pip 21.0 will remove support for this functionality. Requirement already satisfied: alabaster==0.7.12 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from -r requirements.txt (line 8)) (0.7.12) Requirement already satisfied: Babel==2.9.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from -r requirements.txt (line 9)) (2.9.1) Collecting commonmark==0.9.1 Downloading commonmark-0.9.1-py2.py3-none-any.whl (51 kB) Collecting decorator==4.4.2 Downloading decorator-4.4.2-py2.py3-none-any.whl (9.2 kB) Collecting dnspython==1.16.0 Downloading dnspython-1.16.0-py2.py3-none-any.whl (188 kB) Collecting docopt==0.6.2 Downloading docopt-0.6.2.tar.gz (25 kB) Collecting docutils==0.16 Downloading docutils-0.16-py2.py3-none-any.whl (548 kB) Collecting fett==0.3.2 Downloading fett-0.3.2.tar.gz (7.2 kB) Requirement already satisfied: imagesize==1.2.0 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from -r requirements.txt (line 16)) (1.2.0) Collecting livereload==2.6.3 Downloading livereload-2.6.3.tar.gz (25 kB) Collecting pymongo==3.11.4 Downloading pymongo-3.11.4-cp27-cp27mu-manylinux1_x86_64.whl (488 kB) Collecting python-jsonrpc-server==0.3.4 Downloading python-jsonrpc-server-0.3.4.tar.gz (26 kB) Collecting pytz==2021.1 Downloading pytz-2021.1-py2.py3-none-any.whl (510 kB) Collecting recommonmark==0.7.1 Downloading recommonmark-0.7.1-py2.py3-none-any.whl (10 kB) Collecting rstcheck==3.3.1 Downloading rstcheck-3.3.1.tar.gz (13 kB) Requirement already satisfied: Sphinx in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from -r requirements.txt (line 25)) (1.8.5) Collecting sphinx-autobuild Downloading sphinx_autobuild-0.7.1-py2-none-any.whl (12 kB) Requirement already satisfied: sphinx-rtd-theme in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from -r requirements.txt (line 27)) (0.4.3) Collecting sphinxcontrib-applehelp Downloading sphinxcontrib_applehelp-1.0.1-py2.py3-none-any.whl (121 kB) Collecting sphinxcontrib-devhelp Downloading sphinxcontrib_devhelp-1.0.1-py2.py3-none-any.whl (84 kB) Collecting sphinxcontrib-htmlhelp Downloading sphinxcontrib_htmlhelp-1.0.2-py2.py3-none-any.whl (96 kB) Collecting sphinxcontrib-qthelp Downloading sphinxcontrib_qthelp-1.0.2-py2.py3-none-any.whl (90 kB) Collecting sphinxcontrib-serializinghtml Downloading sphinxcontrib_serializinghtml-1.1.3-py2.py3-none-any.whl (89 kB) Collecting typing-extensions==3.7.4.3 Downloading typing_extensions-3.7.4.3-py2-none-any.whl (9.3 kB) Collecting ujson==1.35 Downloading ujson-1.35.tar.gz (192 kB) Collecting watchdog Downloading watchdog-0.10.7.tar.gz (102 kB) Requirement already satisfied: future>=0.14.0; python_version < "3" in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from commonmark==0.9.1->-r requirements.txt (line 10)) (0.18.2) Requirement already satisfied: typing in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from fett==0.3.2->-r requirements.txt (line 15)) (3.10.0.0) Requirement already satisfied: six in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from livereload==2.6.3->-r requirements.txt (line 17)) (1.16.0) Collecting tornado<6 Downloading tornado-5.1.1.tar.gz (516 kB) Collecting futures Downloading futures-3.3.0-py2-none-any.whl (16 kB) Requirement already satisfied: Pygments>=2.0 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from Sphinx->-r requirements.txt (line 25)) (2.5.2) Requirement already satisfied: Jinja2>=2.3 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from Sphinx->-r requirements.txt (line 25)) (2.11.3) Requirement already satisfied: packaging in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from Sphinx->-r requirements.txt (line 25)) (20.9) Requirement already satisfied: snowballstemmer>=1.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from Sphinx->-r requirements.txt (line 25)) (2.1.0) Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from Sphinx->-r requirements.txt (line 25)) (44.1.1) Requirement already satisfied: requests>=2.0.0 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from Sphinx->-r requirements.txt (line 25)) (2.26.0) Requirement already satisfied: sphinxcontrib-websupport in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from Sphinx->-r requirements.txt (line 25)) (1.1.2) Collecting pathtools>=0.1.2 Downloading pathtools-0.1.2.tar.gz (11 kB) Collecting argh>=0.24.1 Downloading argh-0.26.2-py2.py3-none-any.whl (30 kB) Collecting port-for==0.3.1 Downloading port-for-0.3.1.tar.gz (18 kB) Collecting PyYAML>=3.10 Downloading PyYAML-5.4.1-cp27-cp27mu-manylinux1_x86_64.whl (574 kB) Collecting singledispatch Downloading singledispatch-3.7.0-py2.py3-none-any.whl (9.2 kB) Collecting backports_abc>=0.4 Downloading backports_abc-0.5-py2.py3-none-any.whl (5.2 kB) Requirement already satisfied: MarkupSafe>=0.23 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from Jinja2>=2.3->Sphinx->-r requirements.txt (line 25)) (1.1.1) Requirement already satisfied: pyparsing>=2.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from packaging->Sphinx->-r requirements.txt (line 25)) (2.4.7) Requirement already satisfied: certifi>=2017.4.17 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from requests>=2.0.0->Sphinx->-r requirements.txt (line 25)) (2021.10.8) Requirement already satisfied: urllib3<1.27,>=1.21.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from requests>=2.0.0->Sphinx->-r requirements.txt (line 25)) (1.26.7) Requirement already satisfied: chardet<5,>=3.0.2; python_version < "3" in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from requests>=2.0.0->Sphinx->-r requirements.txt (line 25)) (4.0.0) Requirement already satisfied: idna<3,>=2.5; python_version < "3" in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages (from requests>=2.0.0->Sphinx->-r requirements.txt (line 25)) (2.10) Building wheels for collected packages: docopt, fett, livereload, python-jsonrpc-server, rstcheck, ujson, watchdog, tornado, pathtools, port-for Building wheel for docopt (setup.py): started Building wheel for docopt (setup.py): finished with status 'done' Created wheel for docopt: filename=docopt-0.6.2-py2.py3-none-any.whl size=13703 sha256=9cb5590ee072b4658be446f0d06864ec5a77c59c47842fb2ba26d78789ff0d8c Stored in directory: /tmp/pip-ephem-wheel-cache-QvRBl2/wheels/1c/d7/2d/aefbee2bf20e0ed968d4ab943e03451db0f14c52b5f624fc7e Building wheel for fett (setup.py): started Building wheel for fett (setup.py): finished with status 'done' Created wheel for fett: filename=fett-0.3.2-py2-none-any.whl size=6099 sha256=6744bfcad883a0cbbc8577dc36ceeff1fc0edb5abf52f1ca77556350dd1aef4c Stored in directory: /tmp/pip-ephem-wheel-cache-QvRBl2/wheels/38/85/20/4b8a51bf19f1160e888784dd67e312aa5a6014af5d4bcb15b7 Building wheel for livereload (setup.py): started Building wheel for livereload (setup.py): finished with status 'done' Created wheel for livereload: filename=livereload-2.6.3-py2.py3-none-any.whl size=24713 sha256=70959ecc4e87b9ba07ff806de40c32e678fb1066b8271829e2d19bc1665bdc3b Stored in directory: /tmp/pip-ephem-wheel-cache-QvRBl2/wheels/7d/e7/58/c5f84d9cb0a61c83f4c43498de28f3aff73e5ff99a108ae399 Building wheel for python-jsonrpc-server (setup.py): started Building wheel for python-jsonrpc-server (setup.py): finished with status 'done' Created wheel for python-jsonrpc-server: filename=python_jsonrpc_server-0.3.4-py2-none-any.whl size=8965 sha256=d5039afc0f2cc45029573b3f81481bc8d3c8b8cfa4fd5fa3aacd156bf9a23656 Stored in directory: /tmp/pip-ephem-wheel-cache-QvRBl2/wheels/88/5d/df/ce4461f6b468e0358b1066d098772aa08288ce47afcebc5db6 Building wheel for rstcheck (setup.py): started Building wheel for rstcheck (setup.py): finished with status 'done' Created wheel for rstcheck: filename=rstcheck-3.3.1-py2-none-any.whl size=13722 sha256=c0576c46711cf8a7ca2c60201a6fd8ac0826eaab5c69e0a8483006001651008f Stored in directory: /tmp/pip-ephem-wheel-cache-QvRBl2/wheels/47/46/34/8cb0cf81d6f2843ba26e968807caf5bd5129c2ed8eda415a14 Building wheel for ujson (setup.py): started Building wheel for ujson (setup.py): finished with status 'done' Created wheel for ujson: filename=ujson-1.35-cp27-cp27mu-linux_x86_64.whl size=66160 sha256=f19686b54fab59f7c9754735aa6406759a77ba2f3332323a8dc749a75cdba68b Stored in directory: /tmp/pip-ephem-wheel-cache-QvRBl2/wheels/15/7a/1b/0804c274252cdae19c6556ec9c569585e2d71f2c811cd8b322 Building wheel for watchdog (setup.py): started Building wheel for watchdog (setup.py): finished with status 'done' Created wheel for watchdog: filename=watchdog-0.10.7-py2-none-any.whl size=76125 sha256=88b6eba9c1e60c65ea357fe518cf8be60d422823fa491d6ad249609aba7e9c48 Stored in directory: /tmp/pip-ephem-wheel-cache-QvRBl2/wheels/c1/ba/5c/7e1f604d6bfc0975cb4235c6e51a8708771bcd55a285dc1757 Building wheel for tornado (setup.py): started Building wheel for tornado (setup.py): finished with status 'done' Created wheel for tornado: filename=tornado-5.1.1-cp27-cp27mu-linux_x86_64.whl size=461137 sha256=4d7c3f5019602170aa1cf166d735ae8e74bda747771583fa55e727939a28f19a Stored in directory: /tmp/pip-ephem-wheel-cache-QvRBl2/wheels/d8/83/af/e0dc6afbf3a2c51af8d6e3f9fbe790d0c581c2de05bc5d50f5 Building wheel for pathtools (setup.py): started Building wheel for pathtools (setup.py): finished with status 'done' Created wheel for pathtools: filename=pathtools-0.1.2-py2-none-any.whl size=8784 sha256=38d277c934ca8090ec3ae9736e1a00534c5d59203f4256d0d8cfcabb465a1571 Stored in directory: /tmp/pip-ephem-wheel-cache-QvRBl2/wheels/da/24/4e/5b716376944d90d1406666897dbd020764405d5242afb5b236 Building wheel for port-for (setup.py): started Building wheel for port-for (setup.py): finished with status 'done' Created wheel for port-for: filename=port_for-0.3.1-py2-none-any.whl size=19605 sha256=49ee61ac186da52d7272826be58fec313c72aaca2c3a0ea4aa7e457cbe75f8f2 Stored in directory: /tmp/pip-ephem-wheel-cache-QvRBl2/wheels/82/f0/bd/5223799a0cfc58821ff0244d8866444f7210b9bca8b8fe89ed Successfully built docopt fett livereload python-jsonrpc-server rstcheck ujson watchdog tornado pathtools port-for Installing collected packages: commonmark, decorator, dnspython, docopt, docutils, fett, futures, singledispatch, backports-abc, tornado, livereload, pymongo, ujson, python-jsonrpc-server, pytz, recommonmark, rstcheck, pathtools, argh, watchdog, port-for, PyYAML, sphinx-autobuild, sphinxcontrib-applehelp, sphinxcontrib-devhelp, sphinxcontrib-htmlhelp, sphinxcontrib-qthelp, sphinxcontrib-serializinghtml, typing-extensions Attempting uninstall: commonmark Found existing installation: commonmark 0.8.1 Uninstalling commonmark-0.8.1: Successfully uninstalled commonmark-0.8.1 Attempting uninstall: docutils Found existing installation: docutils 0.18 Uninstalling docutils-0.18: Successfully uninstalled docutils-0.18 Attempting uninstall: pytz Found existing installation: pytz 2021.3 Uninstalling pytz-2021.3: Successfully uninstalled pytz-2021.3 Attempting uninstall: recommonmark Found existing installation: recommonmark 0.5.0 Uninstalling recommonmark-0.5.0: Successfully uninstalled recommonmark-0.5.0 Successfully installed PyYAML-5.4.1 argh-0.26.2 backports-abc-0.5 commonmark-0.9.1 decorator-4.4.2 dnspython-1.16.0 docopt-0.6.2 docutils-0.16 fett-0.3.2 futures-3.3.0 livereload-2.6.3 pathtools-0.1.2 port-for-0.3.1 pymongo-3.11.4 python-jsonrpc-server-0.3.4 pytz-2021.1 recommonmark-0.7.1 rstcheck-3.3.1 singledispatch-3.7.0 sphinx-autobuild-0.7.1 sphinxcontrib-applehelp-1.0.1 sphinxcontrib-devhelp-1.0.1 sphinxcontrib-htmlhelp-1.0.2 sphinxcontrib-qthelp-1.0.2 sphinxcontrib-serializinghtml-1.1.3 tornado-5.1.1 typing-extensions-3.7.4.3 ujson-1.35 watchdog-0.10.7 [rtd-command-info] start-time: 2021-11-04T21:18:12.171568Z, end-time: 2021-11-04T21:18:12.236029Z, duration: 0, exit-code: 0 cat conf.py #!/usr/bin/env python3 # -*- coding: utf-8 -*- # # General information about the project. import sys import os sys.path.insert(0, os.path.dirname(__file__)) from misc.cyverse_sphinx_conf import * # noqa project = 'Visual Interactive Computing Environment' copyright = '2021, CyVerse' author = 'CyVerse' version = '2.1' version = '2.1' epub_title = project epub_author = author epub_publisher = author epub_copyright = copyright exclude_patterns = ['README.md', 'License.md', 'Contributors_maintainers.md'] ########################################################################### # auto-created readthedocs.org specific configuration # ########################################################################### # # The following code was added during an automated build on readthedocs.org # It is auto created and injected for every build. The result is based on the # conf.py.tmpl file found in the readthedocs.org codebase: # https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl # # Note: this file shouldn't rely on extra dependencies. import importlib import sys import os.path # Borrowed from six. PY3 = sys.version_info[0] == 3 string_types = str if PY3 else basestring from sphinx import version_info # Get suffix for proper linking to GitHub # This is deprecated in Sphinx 1.3+, # as each page can have its own suffix if globals().get('source_suffix', False): if isinstance(source_suffix, string_types): SUFFIX = source_suffix elif isinstance(source_suffix, (list, tuple)): # Sphinx >= 1.3 supports list/tuple to define multiple suffixes SUFFIX = source_suffix[0] elif isinstance(source_suffix, dict): # Sphinx >= 1.8 supports a mapping dictionary for multiple suffixes SUFFIX = list(source_suffix.keys())[0] # make a ``list()`` for py2/py3 compatibility else: # default to .rst SUFFIX = '.rst' else: SUFFIX = '.rst' # Add RTD Static Path. Add to the end because it overwrites previous files. if not 'html_static_path' in globals(): html_static_path = [] if os.path.exists('_static'): html_static_path.append('_static') # Add RTD Theme only if they aren't overriding it already using_rtd_theme = ( ( 'html_theme' in globals() and html_theme in ['default'] and # Allow people to bail with a hack of having an html_style 'html_style' not in globals() ) or 'html_theme' not in globals() ) if using_rtd_theme: theme = importlib.import_module('sphinx_rtd_theme') html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(theme.get_html_theme_path()) else: html_theme_path = [theme.get_html_theme_path()] if globals().get('websupport2_base_url', False): websupport2_base_url = 'https://readthedocs.com/websupport' websupport2_static_url = 'https://assets.readthedocs.com/' #Add project information to the template context. context = { 'using_theme': using_rtd_theme, 'html_theme': html_theme, 'current_version': "latest", 'version_slug': "latest", 'MEDIA_URL': "https://media.readthedocs.com/media/", 'STATIC_URL': "https://assets.readthedocs.com/", 'PRODUCTION_DOMAIN': "readthedocs.com", 'versions': [ ("latest", "/en/latest/"), ], 'downloads': [ ("pdf", "//learning.cyverse.org/_/downloads/vice/en/latest/pdf/"), ("html", "//learning.cyverse.org/_/downloads/vice/en/latest/htmlzip/"), ("epub", "//learning.cyverse.org/_/downloads/vice/en/latest/epub/"), ], 'subprojects': [ ], 'slug': 'cyverse-visual-interactive-computing-environment', 'name': u'Visual_Interactive_Computing_Environment', 'rtd_language': u'en', 'programming_language': u'words', 'canonical_url': 'https://learning.cyverse.org/projects/vice/en/latest/', 'analytics_code': 'UA-72224033-6', 'single_version': False, 'conf_py_path': '/', 'api_host': 'https://readthedocs.com', 'github_user': 'CyVerse-learning-materials', 'proxied_api_host': '/_', 'github_repo': 'Visual_Interactive_Computing_Environment', 'github_version': 'master', 'display_github': True, 'bitbucket_user': 'None', 'bitbucket_repo': 'None', 'bitbucket_version': 'master', 'display_bitbucket': False, 'gitlab_user': 'None', 'gitlab_repo': 'None', 'gitlab_version': 'master', 'display_gitlab': False, 'READTHEDOCS': True, 'using_theme': (html_theme == "default"), 'new_theme': (html_theme == "sphinx_rtd_theme"), 'source_suffix': SUFFIX, 'ad_free': False, 'docsearch_disabled': False, 'user_analytics_code': 'UA-72224033-6', 'global_analytics_code': 'UA-17997319-2', 'commit': '216b1d62', } # For sphinx >=1.8 we can use html_baseurl to set the canonical URL. # https://www.sphinx-doc.org/en/master/usage/configuration.html#confval-html_baseurl if version_info >= (1, 8): if not globals().get('html_baseurl'): html_baseurl = context['canonical_url'] context['canonical_url'] = None if 'html_context' in globals(): html_context.update(context) else: html_context = context # Add custom RTD extension if 'extensions' in globals(): # Insert at the beginning because it can interfere # with other extensions. # See https://github.com/rtfd/readthedocs.org/pull/4054 extensions.insert(0, "readthedocs_ext.readthedocs") else: extensions = ["readthedocs_ext.readthedocs"] # Add External version warning banner to the external version documentation if 'branch' == 'external': extensions.insert(1, "readthedocs_ext.external_version_warning") readthedocs_vcs_url = 'None' readthedocs_build_url = 'https://readthedocs.com/projects/cyverse-visual-interactive-computing-environment/builds/765129/' project_language = 'en' # User's Sphinx configurations language_user = globals().get('language', None) latex_engine_user = globals().get('latex_engine', None) latex_elements_user = globals().get('latex_elements', None) # Remove this once xindy gets installed in Docker image and XINDYOPS # env variable is supported # https://github.com/rtfd/readthedocs-docker-images/pull/98 latex_use_xindy = False chinese = any([ language_user in ('zh_CN', 'zh_TW'), project_language in ('zh_CN', 'zh_TW'), ]) japanese = any([ language_user == 'ja', project_language == 'ja', ]) if chinese: latex_engine = latex_engine_user or 'xelatex' latex_elements_rtd = { 'preamble': '\\usepackage[UTF8]{ctex}\n', } latex_elements = latex_elements_user or latex_elements_rtd elif japanese: latex_engine = latex_engine_user or 'platex' # Make sure our build directory is always excluded exclude_patterns = globals().get('exclude_patterns', []) exclude_patterns.extend(['_build']) [rtd-command-info] start-time: 2021-11-04T21:18:12.349789Z, end-time: 2021-11-04T21:18:12.704430Z, duration: 0, exit-code: 1 python -m sphinx -T -E -b html -d _build/doctrees -D language=en . _build/html Traceback (most recent call last): File "/home/docs/.pyenv/versions/2.7.18/lib/python2.7/runpy.py", line 174, in _run_module_as_main "__main__", fname, loader, pkg_name) File "/home/docs/.pyenv/versions/2.7.18/lib/python2.7/runpy.py", line 72, in _run_code exec code in run_globals File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages/sphinx/__main__.py", line 14, in from sphinx.cmd.build import main File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages/sphinx/cmd/build.py", line 25, in from sphinx.application import Sphinx File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages/sphinx/application.py", line 34, in from sphinx.environment import BuildEnvironment File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages/sphinx/environment/__init__.py", line 38, in from sphinx.util.websupport import is_commentable File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages/sphinx/util/websupport.py", line 11, in from sphinxcontrib.websupport.utils import is_commentable # NOQA File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages/sphinxcontrib/websupport/__init__.py", line 16, in from sphinxcontrib.websupport.core import WebSupport # NOQA File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages/sphinxcontrib/websupport/core.py", line 29, in from sphinxcontrib.serializinghtml.jsonimpl import dumps as dump_json File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-visual-interactive-computing-environment/envs/latest/lib/python2.7/site-packages/sphinxcontrib/serializinghtml/__init__.py", line 177 def setup(app: Sphinx) -> Dict[str, Any]: ^ SyntaxError: invalid syntax