Read the Docs build information Build id: 750463 Project: institute-for-disease-modeling-emodpy-malaria Version: latest Commit: 2e7c313fc6f03e7b4a452d9cb92a521a159cfa1f Date: 2021-10-19T19:39:36.094200Z State: finished Success: True [rtd-command-info] start-time: 2021-10-19T19:39:38.015405Z, end-time: 2021-10-19T19:39:40.600362Z, duration: 2, exit-code: 0 git clone --no-single-branch --depth 50 git@github.com:InstituteforDiseaseModeling/emodpy-malaria.git . Cloning into '.'... Warning: Permanently added 'github.com,192.30.255.112' (RSA) to the list of known hosts. [rtd-command-info] start-time: 2021-10-19T19:39:40.744607Z, end-time: 2021-10-19T19:39:40.990027Z, duration: 0, exit-code: 0 git checkout --force origin/main Note: checking out 'origin/main'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at 2e7c313 Important improvements to FAQ. (#321) [rtd-command-info] start-time: 2021-10-19T19:39:41.103753Z, end-time: 2021-10-19T19:39:41.168147Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2021-10-19T19:39:42.614244Z, end-time: 2021-10-19T19:39:47.801243Z, duration: 5, exit-code: 0 python3.7 -mvirtualenv Using base prefix '/home/docs/.pyenv/versions/3.7.9' New python executable in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin/python3.7 Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin/python Installing setuptools, pip, wheel... done. [rtd-command-info] start-time: 2021-10-19T19:39:47.935492Z, end-time: 2021-10-19T19:39:49.244140Z, duration: 1, exit-code: 0 python -m pip install --upgrade --no-cache-dir pip setuptools Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/simple Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (21.3) Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (58.2.0) [rtd-command-info] start-time: 2021-10-19T19:39:49.355552Z, end-time: 2021-10-19T19:39:57.884878Z, duration: 8, exit-code: 0 python -m pip install --upgrade --no-cache-dir mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<2.2 Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/simple Collecting mock==1.0.1 Downloading mock-1.0.1.zip (861 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting pillow==5.4.1 Downloading Pillow-5.4.1-cp37-cp37m-manylinux1_x86_64.whl (2.0 MB) Collecting alabaster!=0.7.5,<0.8,>=0.7 Downloading alabaster-0.7.12-py2.py3-none-any.whl (14 kB) Collecting commonmark==0.8.1 Downloading commonmark-0.8.1-py2.py3-none-any.whl (47 kB) Collecting recommonmark==0.5.0 Downloading recommonmark-0.5.0-py2.py3-none-any.whl (9.8 kB) Collecting sphinx<2 Downloading Sphinx-1.8.5-py2.py3-none-any.whl (3.1 MB) Collecting sphinx-rtd-theme<0.5 Downloading sphinx_rtd_theme-0.4.3-py2.py3-none-any.whl (6.4 MB) Collecting readthedocs-sphinx-ext<2.2 Downloading readthedocs_sphinx_ext-2.1.4-py2.py3-none-any.whl (29 kB) Collecting future Downloading future-0.18.2.tar.gz (829 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting docutils>=0.11 Downloading docutils-0.17.1-py2.py3-none-any.whl (575 kB) Collecting packaging Downloading packaging-21.0-py3-none-any.whl (40 kB) Collecting snowballstemmer>=1.1 Downloading snowballstemmer-2.1.0-py2.py3-none-any.whl (93 kB) Collecting Pygments>=2.0 Downloading Pygments-2.10.0-py3-none-any.whl (1.0 MB) Collecting requests>=2.0.0 Downloading requests-2.26.0-py2.py3-none-any.whl (62 kB) Collecting Jinja2>=2.3 Downloading Jinja2-3.0.2-py3-none-any.whl (133 kB) Collecting imagesize Downloading imagesize-1.2.0-py2.py3-none-any.whl (4.8 kB) Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx<2) (58.2.0) Collecting babel!=2.0,>=1.3 Downloading Babel-2.9.1-py2.py3-none-any.whl (8.8 MB) Collecting sphinxcontrib-websupport Downloading sphinxcontrib_websupport-1.2.4-py2.py3-none-any.whl (39 kB) Collecting six>=1.5 Downloading six-1.16.0-py2.py3-none-any.whl (11 kB) Collecting pytz>=2015.7 Downloading pytz-2021.3-py2.py3-none-any.whl (503 kB) Collecting MarkupSafe>=2.0 Downloading MarkupSafe-2.0.1-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (31 kB) Collecting charset-normalizer~=2.0.0 Downloading charset_normalizer-2.0.7-py3-none-any.whl (38 kB) Collecting certifi>=2017.4.17 Downloading certifi-2021.10.8-py2.py3-none-any.whl (149 kB) Collecting urllib3<1.27,>=1.21.1 Downloading urllib3-1.26.7-py2.py3-none-any.whl (138 kB) Collecting idna<4,>=2.5 Downloading idna-3.3-py3-none-any.whl (61 kB) Collecting pyparsing>=2.0.2 Downloading pyparsing-2.4.7-py2.py3-none-any.whl (67 kB) Collecting sphinxcontrib-serializinghtml Downloading sphinxcontrib_serializinghtml-1.1.5-py2.py3-none-any.whl (94 kB) Building wheels for collected packages: mock, future Building wheel for mock (setup.py): started Building wheel for mock (setup.py): finished with status 'done' Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23772 sha256=d0bdbe7a077f92b404ad3caefa8ba35b121eeb42d95d5d1f8c40dcd49f005698 Stored in directory: /tmp/pip-ephem-wheel-cache-kvctv85a/wheels/7a/94/b1/0fdc5339a5bd487a5cc15421ec200d9ba3e2aa7190e4a727f1 Building wheel for future (setup.py): started Building wheel for future (setup.py): finished with status 'done' Created wheel for future: filename=future-0.18.2-py3-none-any.whl size=491070 sha256=39e1c4c3e024761f4dfe8f24ab3d25138356f029713f759a4f04797aa0392992 Stored in directory: /tmp/pip-ephem-wheel-cache-kvctv85a/wheels/56/b0/fe/4410d17b32f1f0c3cf54cdfb2bc04d7b4b8f4ae377e2229ba0 Successfully built mock future Installing collected packages: urllib3, sphinxcontrib-serializinghtml, pytz, pyparsing, MarkupSafe, idna, charset-normalizer, certifi, sphinxcontrib-websupport, snowballstemmer, six, requests, Pygments, packaging, Jinja2, imagesize, future, docutils, babel, alabaster, sphinx, commonmark, sphinx-rtd-theme, recommonmark, readthedocs-sphinx-ext, pillow, mock Successfully installed Jinja2-3.0.2 MarkupSafe-2.0.1 Pygments-2.10.0 alabaster-0.7.12 babel-2.9.1 certifi-2021.10.8 charset-normalizer-2.0.7 commonmark-0.8.1 docutils-0.17.1 future-0.18.2 idna-3.3 imagesize-1.2.0 mock-1.0.1 packaging-21.0 pillow-5.4.1 pyparsing-2.4.7 pytz-2021.3 readthedocs-sphinx-ext-2.1.4 recommonmark-0.5.0 requests-2.26.0 six-1.16.0 snowballstemmer-2.1.0 sphinx-1.8.5 sphinx-rtd-theme-0.4.3 sphinxcontrib-serializinghtml-1.1.5 sphinxcontrib-websupport-1.2.4 urllib3-1.26.7 [rtd-command-info] start-time: 2021-10-19T19:39:58.016806Z, end-time: 2021-10-19T19:40:24.654142Z, duration: 26, exit-code: 0 python -m pip install --exists-action=w --no-cache-dir -r requirements.txt Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/simple Collecting emodpy~=1.14.0 Downloading https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/emodpy/1.14.0/emodpy-1.14.0-py3-none-any.whl (114 kB) Collecting emod-malaria==0.0.0 Downloading https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/emod-malaria/0.0.0/emod_malaria-0.0.0-py3-none-any.whl (3.4 MB) Collecting astunparse Downloading astunparse-1.6.3-py2.py3-none-any.whl (12 kB) Collecting emod-api~=1.15.0 Downloading https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/emod-api/1.15.6/emod_api-1.15.6-py3-none-any.whl (116 kB) Collecting bs4 Downloading bs4-0.0.1.tar.gz (1.1 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting idmtools-models~=1.6.0 Downloading https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/idmtools-models/1.6.4/idmtools_models-1.6.4-py3-none-any.whl (24 kB) Collecting matplotlib Downloading matplotlib-3.4.3-cp37-cp37m-manylinux1_x86_64.whl (10.3 MB) Collecting keyring Downloading keyring-23.2.1-py3-none-any.whl (33 kB) Collecting astor Downloading astor-0.8.1-py2.py3-none-any.whl (27 kB) Collecting idmtools-platform-comps~=1.6.0 Downloading https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/idmtools-platform-comps/1.6.4/idmtools_platform_comps-1.6.4-py3-none-any.whl (177 kB) Collecting idmtools~=1.6.0 Downloading https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/idmtools/1.6.4/idmtools-1.6.4-py3-none-any.whl (162 kB) Collecting click~=7.1 Downloading click-7.1.2-py2.py3-none-any.whl (82 kB) Collecting geographiclib Downloading geographiclib-1.52-py3-none-any.whl (38 kB) Collecting pyproj Downloading pyproj-3.2.1-cp37-cp37m-manylinux2010_x86_64.whl (6.3 MB) Collecting sklearn Downloading sklearn-0.0.tar.gz (1.1 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting pyyaml Downloading PyYAML-6.0-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (596 kB) Collecting scipy Downloading scipy-1.7.1-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.whl (28.5 MB) Collecting shapely Downloading Shapely-1.7.1-cp37-cp37m-manylinux1_x86_64.whl (1.0 MB) Collecting lz4 Downloading lz4-3.1.3-cp37-cp37m-manylinux2010_x86_64.whl (1.8 MB) Collecting numpy!=1.19.4 Downloading numpy-1.21.2-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (15.7 MB) Collecting pandas Downloading pandas-1.3.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (11.3 MB) Collecting pipreqs<0.5,>=0.4.10 Downloading pipreqs-0.4.10-py2.py3-none-any.whl (25 kB) Collecting pluggy~=0.13.1 Downloading pluggy-0.13.1-py2.py3-none-any.whl (18 kB) Collecting more-itertools~=8.8.0 Downloading more_itertools-8.8.0-py3-none-any.whl (48 kB) Collecting pandas Downloading pandas-1.1.5-cp37-cp37m-manylinux1_x86_64.whl (9.5 MB) Collecting packaging<21.0,>=20.4 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Downloading threadpoolctl-3.0.0-py3-none-any.whl (14 kB) Building wheels for collected packages: bs4, sklearn, docopt Building wheel for bs4 (setup.py): started Building wheel for bs4 (setup.py): finished with status 'done' Created wheel for bs4: filename=bs4-0.0.1-py3-none-any.whl size=1271 sha256=be46c7316cf0ce9e6d5a5e071fd9be17a73d314d36ea58c7ffc4001e1fbc7228 Stored in directory: /tmp/pip-ephem-wheel-cache-nkvv9yux/wheels/0a/9e/ba/20e5bbc1afef3a491f0b3bb74d508f99403aabe76eda2167ca Building wheel for sklearn (setup.py): started Building wheel for sklearn (setup.py): finished with status 'done' Created wheel for sklearn: filename=sklearn-0.0-py2.py3-none-any.whl size=1309 sha256=a1ac613499b3d669117d38e690a5e0402c3fc672862a871d5e7c3fcdf1e1a750 Stored in directory: /tmp/pip-ephem-wheel-cache-nkvv9yux/wheels/46/ef/c3/157e41f5ee1372d1be90b09f74f82b10e391eaacca8f22d33e Building wheel for docopt (setup.py): started Building wheel for docopt (setup.py): finished with status 'done' Created wheel for docopt: filename=docopt-0.6.2-py2.py3-none-any.whl size=13724 sha256=7bb3f1074fa4bbe44b1cf3ee616e005ab040ca9f2c87ab665b724f2a14ffde10 Stored in directory: /tmp/pip-ephem-wheel-cache-nkvv9yux/wheels/72/b0/3f/1d95f96ff986c7dfffe46ce2be4062f38ebd04b506c77c81b9 Successfully built bs4 sklearn docopt Installing collected packages: zipp, typing-extensions, pycparser, numpy, importlib-metadata, yarg, toml, threadpoolctl, scipy, python-dateutil, py, pluggy, packaging, joblib, iniconfig, humanfriendly, docopt, cffi, cached-property, attrs, xdg, tqdm, tabulate, soupsieve, scikit-learn, pyyaml, pytest, pygit2, pipreqs, pandas, more-itertools, jeepney, diskcache, cryptography, coloredlogs, backoff, sklearn, shapely, SecretStorage, pytest-lazy-fixture, pyproj, pyCOMPS, pillow, lz4, kiwisolver, idmtools, geographiclib, cycler, beautifulsoup4, matplotlib, keyring, idmtools-platform-comps, idmtools-models, emod-api, click, bs4, astunparse, astor, emodpy, emod-malaria Attempting uninstall: packaging Found existing installation: packaging 21.0 Uninstalling packaging-21.0: Successfully uninstalled packaging-21.0 Attempting uninstall: pillow Found existing installation: Pillow 5.4.1 Uninstalling Pillow-5.4.1: Successfully uninstalled Pillow-5.4.1 Successfully installed SecretStorage-3.3.1 astor-0.8.1 astunparse-1.6.3 attrs-21.2.0 backoff-1.10.0 beautifulsoup4-4.10.0 bs4-0.0.1 cached-property-1.5.2 cffi-1.15.0 click-7.1.2 coloredlogs-15.0.1 cryptography-35.0.0 cycler-0.10.0 diskcache-5.2.1 docopt-0.6.2 emod-api-1.15.6 emod-malaria-0.0.0 emodpy-1.14.0 geographiclib-1.52 humanfriendly-10.0 idmtools-1.6.4 idmtools-models-1.6.4 idmtools-platform-comps-1.6.4 importlib-metadata-4.8.1 iniconfig-1.1.1 jeepney-0.7.1 joblib-1.1.0 keyring-23.2.1 kiwisolver-1.3.2 lz4-3.1.3 matplotlib-3.4.3 more-itertools-8.8.0 numpy-1.21.2 packaging-20.9 pandas-1.1.5 pillow-8.4.0 pipreqs-0.4.10 pluggy-0.13.1 py-1.10.0 pyCOMPS-2.5.0 pycparser-2.20 pygit2-1.5.0 pyproj-3.2.1 pytest-6.2.5 pytest-lazy-fixture-0.6.3 python-dateutil-2.8.2 pyyaml-5.4.1 scikit-learn-1.0 scipy-1.7.1 shapely-1.7.1 sklearn-0.0 soupsieve-2.2.1 tabulate-0.8.9 threadpoolctl-3.0.0 toml-0.10.2 tqdm-4.62.3 typing-extensions-3.10.0.2 xdg-5.1.1 yarg-0.1.9 zipp-3.6.0 [rtd-command-info] start-time: 2021-10-19T19:40:24.778535Z, end-time: 2021-10-19T19:40:30.293133Z, duration: 5, exit-code: 0 python -m pip install --exists-action=w --no-cache-dir -r docs/requirements.txt Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/artifactory/api/pypi/idm-pypi-production/simple Collecting plantweb~=1.2.1 Downloading plantweb-1.2.1-py3-none-any.whl (20 kB) Collecting pygit2~=1.4.0 Downloading pygit2-1.4.0-cp37-cp37m-manylinux2010_x86_64.whl (3.0 MB) Collecting PyGithub~=1.54 Downloading PyGithub-1.55-py3-none-any.whl (291 kB) Collecting sphinx-copybutton~=0.3.1 Downloading sphinx_copybutton-0.3.3-py3-none-any.whl (12 kB) Collecting sphinx-rtd-theme~=0.5.0 Downloading sphinx_rtd_theme-0.5.2-py2.py3-none-any.whl (9.1 MB) Collecting sphinxcontrib-napoleon~=0.7 Downloading sphinxcontrib_napoleon-0.7-py2.py3-none-any.whl (17 kB) Collecting sphinxcontrib-programoutput~=0.16 Downloading sphinxcontrib_programoutput-0.17-py2.py3-none-any.whl (22 kB) Collecting sphinx~=3.3.1 Downloading Sphinx-3.3.1-py3-none-any.whl (2.9 MB) Collecting sphinxext.remoteliteralinclude Downloading sphinxext_remoteliteralinclude-0.3.0-py3-none-any.whl (6.3 kB) Requirement already satisfied: six in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from plantweb~=1.2.1->-r docs/requirements.txt (line 1)) (1.16.0) Requirement already satisfied: docutils in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from plantweb~=1.2.1->-r docs/requirements.txt (line 1)) (0.17.1) Requirement already satisfied: requests in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from plantweb~=1.2.1->-r docs/requirements.txt (line 1)) (2.26.0) Requirement already satisfied: cffi>=1.4.0 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from pygit2~=1.4.0->-r docs/requirements.txt (line 2)) (1.15.0) Requirement already satisfied: cached-property in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from pygit2~=1.4.0->-r docs/requirements.txt (line 2)) (1.5.2) Collecting pyjwt>=2.0 Downloading PyJWT-2.3.0-py3-none-any.whl (16 kB) Collecting pynacl>=1.4.0 Downloading PyNaCl-1.4.0-cp35-abi3-manylinux1_x86_64.whl (961 kB) Collecting deprecated Downloading Deprecated-1.2.13-py2.py3-none-any.whl (9.6 kB) Collecting docutils Downloading docutils-0.16-py2.py3-none-any.whl (548 kB) Collecting pockets>=0.3 Downloading pockets-0.9.1-py2.py3-none-any.whl (26 kB) Requirement already satisfied: imagesize in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (1.2.0) Requirement already satisfied: sphinxcontrib-serializinghtml in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (1.1.5) Requirement already satisfied: babel>=1.3 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (2.9.1) Requirement already satisfied: alabaster<0.8,>=0.7 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (0.7.12) Collecting sphinxcontrib-devhelp Downloading sphinxcontrib_devhelp-1.0.2-py2.py3-none-any.whl (84 kB) Collecting sphinxcontrib-qthelp Downloading sphinxcontrib_qthelp-1.0.3-py2.py3-none-any.whl (90 kB) Requirement already satisfied: snowballstemmer>=1.1 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (2.1.0) Requirement already satisfied: packaging in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (20.9) Collecting sphinxcontrib-applehelp Downloading sphinxcontrib_applehelp-1.0.2-py2.py3-none-any.whl (121 kB) Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (58.2.0) Requirement already satisfied: Jinja2>=2.3 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (3.0.2) Requirement already satisfied: Pygments>=2.0 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (2.10.0) Collecting sphinxcontrib-jsmath Downloading sphinxcontrib_jsmath-1.0.1-py2.py3-none-any.whl (5.1 kB) Collecting sphinxcontrib-htmlhelp Downloading sphinxcontrib_htmlhelp-2.0.0-py2.py3-none-any.whl (100 kB) Requirement already satisfied: pytz>=2015.7 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from babel>=1.3->sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (2021.3) Requirement already satisfied: pycparser in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from cffi>=1.4.0->pygit2~=1.4.0->-r docs/requirements.txt (line 2)) (2.20) Requirement already satisfied: MarkupSafe>=2.0 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from Jinja2>=2.3->sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (2.0.1) Requirement already satisfied: urllib3<1.27,>=1.21.1 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from requests->plantweb~=1.2.1->-r docs/requirements.txt (line 1)) (1.26.7) Requirement already satisfied: certifi>=2017.4.17 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from requests->plantweb~=1.2.1->-r docs/requirements.txt (line 1)) (2021.10.8) Requirement already satisfied: charset-normalizer~=2.0.0 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from requests->plantweb~=1.2.1->-r docs/requirements.txt (line 1)) (2.0.7) Requirement already satisfied: idna<4,>=2.5 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from requests->plantweb~=1.2.1->-r docs/requirements.txt (line 1)) (3.3) Collecting wrapt<2,>=1.10 Downloading wrapt-1.13.2-cp37-cp37m-manylinux2010_x86_64.whl (79 kB) Requirement already satisfied: pyparsing>=2.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages (from packaging->sphinx~=3.3.1->-r docs/requirements.txt (line 8)) (2.4.7) Installing collected packages: wrapt, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, docutils, sphinx, pynacl, pyjwt, pockets, deprecated, sphinxext.remoteliteralinclude, sphinxcontrib-programoutput, sphinxcontrib-napoleon, sphinx-rtd-theme, sphinx-copybutton, PyGithub, pygit2, plantweb Attempting uninstall: docutils Found existing installation: docutils 0.17.1 Uninstalling docutils-0.17.1: Successfully uninstalled docutils-0.17.1 Attempting uninstall: sphinx Found existing installation: Sphinx 1.8.5 Uninstalling Sphinx-1.8.5: Successfully uninstalled Sphinx-1.8.5 Attempting uninstall: sphinx-rtd-theme Found existing installation: sphinx-rtd-theme 0.4.3 Uninstalling sphinx-rtd-theme-0.4.3: Successfully uninstalled sphinx-rtd-theme-0.4.3 Attempting uninstall: pygit2 Found existing installation: pygit2 1.5.0 Uninstalling pygit2-1.5.0: Successfully uninstalled pygit2-1.5.0 Successfully installed PyGithub-1.55 deprecated-1.2.13 docutils-0.16 plantweb-1.2.1 pockets-0.9.1 pygit2-1.4.0 pyjwt-2.3.0 pynacl-1.4.0 sphinx-3.3.1 sphinx-copybutton-0.3.3 sphinx-rtd-theme-0.5.2 sphinxcontrib-applehelp-1.0.2 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-htmlhelp-2.0.0 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-napoleon-0.7 sphinxcontrib-programoutput-0.17 sphinxcontrib-qthelp-1.0.3 sphinxext.remoteliteralinclude-0.3.0 wrapt-1.13.2 [rtd-command-info] start-time: 2021-10-19T19:40:30.408232Z, end-time: 2021-10-19T19:40:31.571765Z, duration: 1, exit-code: 0 python ./setup.py install --force running install running bdist_egg running egg_info creating emodpy_malaria.egg-info writing emodpy_malaria.egg-info/PKG-INFO writing dependency_links to emodpy_malaria.egg-info/dependency_links.txt writing requirements to emodpy_malaria.egg-info/requires.txt writing top-level names to emodpy_malaria.egg-info/top_level.txt writing manifest file 'emodpy_malaria.egg-info/SOURCES.txt' reading manifest file 'emodpy_malaria.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'emodpy_malaria.egg-info/SOURCES.txt' installing library code to build/bdist.linux-x86_64/egg running install_lib running build_py creating build creating build/lib creating build/lib/emodpy_malaria copying emodpy_malaria/malaria_config.py -> build/lib/emodpy_malaria copying emodpy_malaria/vector_config.py -> build/lib/emodpy_malaria copying emodpy_malaria/__init__.py -> build/lib/emodpy_malaria creating build/lib/tests copying tests/__init__.py -> build/lib/tests creating build/lib/emodpy_malaria/reporters copying emodpy_malaria/reporters/builtin.py -> build/lib/emodpy_malaria/reporters copying emodpy_malaria/reporters/__init__.py -> build/lib/emodpy_malaria/reporters creating build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/bednet.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/ivermectin.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/sugartrap.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/diag_survey.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/irs.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/spacespraying.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/inputeir.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/mosquitorelease.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/treatment_seeking.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/community_health_worker.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/udbednet.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/drug.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/outbreak.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/__init__.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/drug_campaign.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/outdoorrestkill.py -> build/lib/emodpy_malaria/interventions copying emodpy_malaria/interventions/common.py -> build/lib/emodpy_malaria/interventions creating build/lib/emodpy_malaria/demographics copying emodpy_malaria/demographics/MalariaDemographics.py -> build/lib/emodpy_malaria/demographics copying emodpy_malaria/demographics/__init__.py -> build/lib/emodpy_malaria/demographics creating build/lib/tests/unittests copying tests/unittests/test_malaria_interventions.py -> build/lib/tests/unittests copying tests/unittests/get_latest_schema.py -> build/lib/tests/unittests copying tests/unittests/test_treatment_seeking.py -> build/lib/tests/unittests copying tests/unittests/test_malaria_reporters.py -> build/lib/tests/unittests copying tests/unittests/test_malaria_interventions_as_files.py -> build/lib/tests/unittests copying tests/unittests/get_unittest_coverage.py -> build/lib/tests/unittests copying tests/unittests/test_malaria_config.py -> build/lib/tests/unittests copying tests/unittests/schema_path_file.py -> build/lib/tests/unittests copying tests/unittests/test_import.py -> build/lib/tests/unittests copying tests/unittests/__init__.py -> build/lib/tests/unittests copying emodpy_malaria/malaria_drug_params.csv -> build/lib/emodpy_malaria copying emodpy_malaria/malaria_vector_species_params.csv -> build/lib/emodpy_malaria creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/egg creating build/bdist.linux-x86_64/egg/emodpy_malaria copying build/lib/emodpy_malaria/malaria_config.py -> build/bdist.linux-x86_64/egg/emodpy_malaria creating build/bdist.linux-x86_64/egg/emodpy_malaria/reporters copying build/lib/emodpy_malaria/reporters/builtin.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/reporters copying build/lib/emodpy_malaria/reporters/__init__.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/reporters copying build/lib/emodpy_malaria/vector_config.py -> build/bdist.linux-x86_64/egg/emodpy_malaria copying build/lib/emodpy_malaria/malaria_drug_params.csv -> build/bdist.linux-x86_64/egg/emodpy_malaria creating build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/bednet.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/ivermectin.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/sugartrap.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/diag_survey.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/irs.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/spacespraying.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/inputeir.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/mosquitorelease.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/treatment_seeking.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/community_health_worker.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/udbednet.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/drug.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/outbreak.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/__init__.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/drug_campaign.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/outdoorrestkill.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/interventions/common.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/interventions copying build/lib/emodpy_malaria/malaria_vector_species_params.csv -> build/bdist.linux-x86_64/egg/emodpy_malaria creating build/bdist.linux-x86_64/egg/emodpy_malaria/demographics copying build/lib/emodpy_malaria/demographics/MalariaDemographics.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/demographics copying build/lib/emodpy_malaria/demographics/__init__.py -> build/bdist.linux-x86_64/egg/emodpy_malaria/demographics copying build/lib/emodpy_malaria/__init__.py -> build/bdist.linux-x86_64/egg/emodpy_malaria creating build/bdist.linux-x86_64/egg/tests creating build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_malaria_interventions.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/get_latest_schema.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_treatment_seeking.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_malaria_reporters.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_malaria_interventions_as_files.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/get_unittest_coverage.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_malaria_config.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/schema_path_file.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/test_import.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/unittests/__init__.py -> build/bdist.linux-x86_64/egg/tests/unittests copying build/lib/tests/__init__.py -> build/bdist.linux-x86_64/egg/tests byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/malaria_config.py to malaria_config.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/reporters/builtin.py to builtin.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/reporters/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/vector_config.py to vector_config.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/bednet.py to bednet.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/ivermectin.py to ivermectin.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/sugartrap.py to sugartrap.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/diag_survey.py to diag_survey.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/irs.py to irs.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/spacespraying.py to spacespraying.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/inputeir.py to inputeir.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/mosquitorelease.py to mosquitorelease.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/treatment_seeking.py to treatment_seeking.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/community_health_worker.py to community_health_worker.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/udbednet.py to udbednet.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/drug.py to drug.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/outbreak.py to outbreak.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/drug_campaign.py to drug_campaign.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/outdoorrestkill.py to outdoorrestkill.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/interventions/common.py to common.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/demographics/MalariaDemographics.py to MalariaDemographics.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/demographics/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/emodpy_malaria/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_malaria_interventions.py to test_malaria_interventions.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/get_latest_schema.py to get_latest_schema.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_treatment_seeking.py to test_treatment_seeking.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_malaria_reporters.py to test_malaria_reporters.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_malaria_interventions_as_files.py to test_malaria_interventions_as_files.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/get_unittest_coverage.py to get_unittest_coverage.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_malaria_config.py to test_malaria_config.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/schema_path_file.py to schema_path_file.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/test_import.py to test_import.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/unittests/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/tests/__init__.py to __init__.cpython-37.pyc creating build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying emodpy_malaria.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO zip_safe flag not set; analyzing archive contents... emodpy_malaria.__pycache__.malaria_config.cpython-37: module references __file__ emodpy_malaria.__pycache__.vector_config.cpython-37: module references __file__ tests.unittests.__pycache__.schema_path_file.cpython-37: module references __file__ tests.unittests.__pycache__.test_malaria_config.cpython-37: module references __file__ tests.unittests.__pycache__.test_malaria_interventions.cpython-37: module references __file__ tests.unittests.__pycache__.test_malaria_reporters.cpython-37: module references __file__ tests.unittests.__pycache__.test_treatment_seeking.cpython-37: module references __file__ creating dist creating 'dist/emodpy_malaria-0.0.98-py3.7.egg' and adding 'build/bdist.linux-x86_64/egg' to it removing 'build/bdist.linux-x86_64/egg' (and everything under it) Processing emodpy_malaria-0.0.98-py3.7.egg creating /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages/emodpy_malaria-0.0.98-py3.7.egg Extracting emodpy_malaria-0.0.98-py3.7.egg to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Adding emodpy-malaria 0.0.98 to easy-install.pth file Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages/emodpy_malaria-0.0.98-py3.7.egg Processing dependencies for emodpy-malaria==0.0.98 Searching for emod-malaria==0.0.0 Best match: emod-malaria 0.0.0 Adding emod-malaria 0.0.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for emodpy==1.14.0 Best match: emodpy 1.14.0 Adding emodpy 1.14.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for idmtools-models==1.6.4 Best match: idmtools-models 1.6.4 Adding idmtools-models 1.6.4 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for click==7.1.2 Best match: click 7.1.2 Adding click 7.1.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for astor==0.8.1 Best match: astor 0.8.1 Adding astor 0.8.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for emod-api==1.15.6 Best match: emod-api 1.15.6 Adding emod-api 1.15.6 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for keyring==23.2.1 Best match: keyring 23.2.1 Adding keyring 23.2.1 to easy-install.pth file Installing keyring script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for astunparse==1.6.3 Best match: astunparse 1.6.3 Adding astunparse 1.6.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for bs4==0.0.1 Best match: bs4 0.0.1 Adding bs4 0.0.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for matplotlib==3.4.3 Best match: matplotlib 3.4.3 Adding matplotlib 3.4.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for idmtools-platform-comps==1.6.4 Best match: idmtools-platform-comps 1.6.4 Adding idmtools-platform-comps 1.6.4 to easy-install.pth file Installing comps-cli script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for idmtools==1.6.4 Best match: idmtools 1.6.4 Adding idmtools 1.6.4 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for Jinja2==3.0.2 Best match: Jinja2 3.0.2 Adding Jinja2 3.0.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for sklearn==0.0 Best match: sklearn 0.0 Adding sklearn 0.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pyproj==3.2.1 Best match: pyproj 3.2.1 Adding pyproj 3.2.1 to easy-install.pth file Installing pyproj script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pandas==1.1.5 Best match: pandas 1.1.5 Adding pandas 1.1.5 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for PyYAML==5.4.1 Best match: PyYAML 5.4.1 Adding PyYAML 5.4.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for Shapely==1.7.1 Best match: Shapely 1.7.1 Adding Shapely 1.7.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for geographiclib==1.52 Best match: geographiclib 1.52 Adding geographiclib 1.52 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for lz4==3.1.3 Best match: lz4 3.1.3 Adding lz4 3.1.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for scipy==1.7.1 Best match: scipy 1.7.1 Adding scipy 1.7.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for numpy==1.21.2 Best match: numpy 1.21.2 Adding numpy 1.21.2 to easy-install.pth file Installing f2py script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing f2py3 script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing f2py3.7 script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for SecretStorage==3.3.1 Best match: SecretStorage 3.3.1 Adding SecretStorage 3.3.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for importlib-metadata==4.8.1 Best match: importlib-metadata 4.8.1 Adding importlib-metadata 4.8.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for jeepney==0.7.1 Best match: jeepney 0.7.1 Adding jeepney 0.7.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for wheel==0.37.0 Best match: wheel 0.37.0 Adding wheel 0.37.0 to easy-install.pth file Installing wheel script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for six==1.16.0 Best match: six 1.16.0 Adding six 1.16.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for beautifulsoup4==4.10.0 Best match: beautifulsoup4 4.10.0 Adding beautifulsoup4 4.10.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for Pillow==8.4.0 Best match: Pillow 8.4.0 Adding Pillow 8.4.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for python-dateutil==2.8.2 Best match: python-dateutil 2.8.2 Adding python-dateutil 2.8.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pyparsing==2.4.7 Best match: pyparsing 2.4.7 Adding pyparsing 2.4.7 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for cycler==0.10.0 Best match: cycler 0.10.0 Adding cycler 0.10.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for kiwisolver==1.3.2 Best match: kiwisolver 1.3.2 Adding kiwisolver 1.3.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pytest-lazy-fixture==0.6.3 Best match: pytest-lazy-fixture 0.6.3 Adding pytest-lazy-fixture 0.6.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pyCOMPS==2.5.0 Best match: pyCOMPS 2.5.0 Adding pyCOMPS 2.5.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for tqdm==4.62.3 Best match: tqdm 4.62.3 Adding tqdm 4.62.3 to easy-install.pth file Installing tqdm script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pipreqs==0.4.10 Best match: pipreqs 0.4.10 Adding pipreqs 0.4.10 to easy-install.pth file Installing pipreqs script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for coloredlogs==15.0.1 Best match: coloredlogs 15.0.1 Adding coloredlogs 15.0.1 to easy-install.pth file Installing coloredlogs script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for diskcache==5.2.1 Best match: diskcache 5.2.1 Adding diskcache 5.2.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pluggy==0.13.1 Best match: pluggy 0.13.1 Adding pluggy 0.13.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pygit2==1.4.0 Best match: pygit2 1.4.0 Adding pygit2 1.4.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for backoff==1.10.0 Best match: backoff 1.10.0 Adding backoff 1.10.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for tabulate==0.8.9 Best match: tabulate 0.8.9 Adding tabulate 0.8.9 to easy-install.pth file Installing tabulate script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for more-itertools==8.8.0 Best match: more-itertools 8.8.0 Adding more-itertools 8.8.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for packaging==20.9 Best match: packaging 20.9 Adding packaging 20.9 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for MarkupSafe==2.0.1 Best match: MarkupSafe 2.0.1 Adding MarkupSafe 2.0.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for scikit-learn==1.0 Best match: scikit-learn 1.0 Adding scikit-learn 1.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for certifi==2021.10.8 Best match: certifi 2021.10.8 Adding certifi 2021.10.8 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pytz==2021.3 Best match: pytz 2021.3 Adding pytz 2021.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for cryptography==35.0.0 Best match: cryptography 35.0.0 Adding cryptography 35.0.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for typing-extensions==3.10.0.2 Best match: typing-extensions 3.10.0.2 Adding typing-extensions 3.10.0.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for zipp==3.6.0 Best match: zipp 3.6.0 Adding zipp 3.6.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for soupsieve==2.2.1 Best match: soupsieve 2.2.1 Adding soupsieve 2.2.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pytest==6.2.5 Best match: pytest 6.2.5 Adding pytest 6.2.5 to easy-install.pth file Installing py.test script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing pytest script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for requests==2.26.0 Best match: requests 2.26.0 Adding requests 2.26.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for xdg==5.1.1 Best match: xdg 5.1.1 Adding xdg 5.1.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for future==0.18.2 Best match: future 0.18.2 Adding future 0.18.2 to easy-install.pth file Installing futurize script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Installing pasteurize script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for docopt==0.6.2 Best match: docopt 0.6.2 Adding docopt 0.6.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for yarg==0.1.9 Best match: yarg 0.1.9 Adding yarg 0.1.9 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for humanfriendly==10.0 Best match: humanfriendly 10.0 Adding humanfriendly 10.0 to easy-install.pth file Installing humanfriendly script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for cffi==1.15.0 Best match: cffi 1.15.0 Adding cffi 1.15.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for cached-property==1.5.2 Best match: cached-property 1.5.2 Adding cached-property 1.5.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for joblib==1.1.0 Best match: joblib 1.1.0 Adding joblib 1.1.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for threadpoolctl==3.0.0 Best match: threadpoolctl 3.0.0 Adding threadpoolctl 3.0.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for py==1.10.0 Best match: py 1.10.0 Adding py 1.10.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for iniconfig==1.1.1 Best match: iniconfig 1.1.1 Adding iniconfig 1.1.1 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for attrs==21.2.0 Best match: attrs 21.2.0 Adding attrs 21.2.0 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for toml==0.10.2 Best match: toml 0.10.2 Adding toml 0.10.2 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for urllib3==1.26.7 Best match: urllib3 1.26.7 Adding urllib3 1.26.7 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for idna==3.3 Best match: idna 3.3 Adding idna 3.3 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for charset-normalizer==2.0.7 Best match: charset-normalizer 2.0.7 Adding charset-normalizer 2.0.7 to easy-install.pth file Installing normalizer script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/bin Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Searching for pycparser==2.20 Best match: pycparser 2.20 Adding pycparser 2.20 to easy-install.pth file Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/latest/lib/python3.7/site-packages Finished processing dependencies for emodpy-malaria==0.0.98 [rtd-command-info] start-time: 2021-10-19T19:40:32.816609Z, end-time: 2021-10-19T19:40:32.878705Z, duration: 0, exit-code: 0 cat docs/conf.py # -*- coding: utf-8 -*- # # Sphinx Demo docs build configuration file, created by # sphinx-quickstart on Fri Aug 26 16:52:16 2016. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. # # All configuration values have a default; values that are commented out # serve to show the default. # If extensions (or modules to document with autodoc) are in another directory, # add these directories to sys.path here. If the directory is relative to the # docs root, use os.path.abspath to make it absolute, like shown here. # import os import subprocess import sys import sphinx_rtd_theme import configparser from datetime import datetime from urllib.request import urlretrieve if sys.platform in ["linux", "darwin"]: subprocess.check_output(["make", "generate-api"], cwd=os.path.dirname(os.path.abspath(__file__))) else: subprocess.check_output(["make.bat", "generate-api"], cwd=os.path.dirname(os.path.abspath(__file__))) # -- General configuration ------------------------------------------------ tags.add('emodpymalaria') # If your docs needs a minimal Sphinx version, state it here. # # needs_sphinx = '1.0' # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [ 'sphinx.ext.mathjax', 'sphinx.ext.githubpages', 'sphinx.ext.autodoc', 'sphinxcontrib.napoleon', 'sphinx.ext.todo', 'plantweb.directive', 'sphinxcontrib.programoutput', 'sphinx_copybutton', 'sphinx.ext.intersphinx', 'sphinxext.remoteliteralinclude' ] plantuml = 'plantweb' autodoc_default_options = { 'member-order': 'bysource', 'members': None, 'exclude-members': '__all__' } autodoc_mock_imports = [] napoleon_google_docstring = True # napoleon_numpy_docstring = True # Add any paths that contain templates here, relative to this directory. templates_path = ['_templates'] # The suffix(es) of source filenames. # You can specify multiple suffix as a list of string: # # source_suffix = ['.rst', '.md'] source_suffix = '.rst' # The encoding of source files. # # source_encoding = 'utf-8-sig' # The master toctree document. master_doc = 'index' # General information about the project. project = u'emodpy-malaria' copyright = f'1999 - {datetime.today().year}, Bill & Melinda Gates Foundation. All rights reserved.' author = u'Institute for Disease Modeling' # The version info for the project you're documenting, acts as replacement for # |version| and |release|, also used in various other places throughout the # built documents. # # The short X.Y version. #current_path = os.path.dirname(__file__) #version_path = os.path.join(current_path, '..', '.bumpversion.cfg') #config = configparser.ConfigParser() #config.read(version_path) #version = config['bumpversion']['current_version'] # The full version, including alpha/beta/rc tags. # release = u'1.0' # The language for content autogenerated by Sphinx. Refer to docs # for a list of supported languages. # # This is also used if you do content translation via gettext catalogs. # Usually you set "language" from the command line for these cases. language = None # There are two options for replacing |today|: either, you set today to some # non-false value, then it is used: # # today = '' # # Else, today_fmt is used as the format for a strftime call. # # today_fmt = '%B %d, %Y' # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. # This patterns also effect to html_static_path and html_extra_path exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store'] # The reST default role (used for this markup: `text`) to use for all # documents. # # default_role = None # If true, '()' will be appended to :func: etc. cross-reference text. # # add_function_parentheses = True # If true, the current module name will be prepended to all description # unit titles (such as .. function::). # # add_module_names = True # If true, sectionauthor and moduleauthor directives will be shown in the # output. They are ignored by default. # # show_authors = False # The name of the Pygments (syntax highlighting) style to use. pygments_style = 'sphinx' # A list of ignored prefixes for module index sorting. # modindex_common_prefix = [] # If true, keep warnings as "system message" paragraphs in the built documents. # keep_warnings = False # If true, `todo` and `todoList` produce output, else they produce nothing. todo_include_todos = False # RST epilog is added to the end of every topic. Useful for replace # directives to use across the docset. rst_epilog = "\n.. include:: /variables.txt" # -- Options for HTML output ---------------------------------------------- # The theme to use for HTML and HTML Help pages. See the docs for # a list of builtin themes. # html_theme = 'sphinx_rtd_theme' # Theme options are theme-specific and customize the look and feel of a theme # further. For a list of options available for each theme, see the # docs. # # # html_theme_options = { # } # Add any paths that contain custom themes here, relative to this directory. html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] # The name for this set of Sphinx documents. # " v docs" by default. # # html_title = u'Sphinx Demo v1.0' # A shorter title for the navigation bar. Default is the same as html_title. # # html_short_title = None # The name of an image file (relative to this directory) to place at the top # of the sidebar. # html_logo = "images/IDM_white.png" # The name of an image file (relative to this directory) to use as a favicon of # the docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32 # pixels large. # html_favicon = "images/favicon.ico" # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css". html_static_path = ['_static'] html_context = { 'css_files': [ '_static/theme_overrides.css', '_static/copy_button.css' ] } html_js_files = ['show_block_by_os.js'] # Add any extra paths that contain custom files (such as robots.txt or # .htaccess) here, relative to this directory. These files are copied # directly to the root of the docs. # # html_extra_path = [] # If not None, a 'Last updated on:' timestamp is inserted at every page # bottom, using the given strftime format. # The empty string is equivalent to '%b %d, %Y'. # # html_last_updated_fmt = None # If true, SmartyPants will be used to convert quotes and dashes to # typographically correct entities. # # html_use_smartypants = True # Custom sidebar templates, maps document names to template names. # # html_sidebars = {} # Additional templates that should be rendered to pages, maps page names to # template names. # # html_additional_pages = {} # If false, no module index is generated. # # html_domain_indices = True # If false, no index is generated. # # html_use_index = True # If true, the index is split into individual pages for each letter. # # html_split_index = False # If true, links to the reST sources are added to the pages. # html_show_sourcelink = False # If true, "Created using Sphinx" is shown in the HTML footer. Default is True. # html_show_sphinx = False # If true, "(C) Copyright ..." is shown in the HTML footer. Default is True. # # html_show_copyright = True # If true, an OpenSearch description file will be output, and all pages will # contain a tag referring to it. The value of this option must be the # base URL from which the finished HTML is served. # html_use_opensearch = 'www.idmod.org/docs/' # This is the file name suffix for HTML files (e.g. ".xhtml"). # html_file_suffix = None # Language to be used for generating the HTML full-text search index. # Sphinx supports the following languages: # 'da', 'de', 'en', 'es', 'fi', 'fr', 'hu', 'it', 'ja' # 'nl', 'no', 'pt', 'ro', 'ru', 'sv', 'tr', 'zh' # # html_search_language = 'en' # A dictionary with options for the search language support, empty by default. # 'ja' uses this config value. # 'zh' user can custom change `jieba` dictionary path. # # html_search_options = {'type': 'default'} # The name of a javascript file (relative to the configuration directory) that # implements a search results scorer. If empty, the default will be used. # # html_search_scorer = 'scorer.js' # Output file base name for HTML help builder. htmlhelp_basename = 'emodpy-malaria' # -- Options for LaTeX output --------------------------------------------- latex_elements = { # The paper size ('letterpaper' or 'a4paper'). # # 'papersize': 'letterpaper', # The font size ('10pt', '11pt' or '12pt'). # # 'pointsize': '10pt', # Additional stuff for the LaTeX preamble. # # 'preamble': '', # Latex figure (float) alignment # # 'figure_align': 'htbp', } # Grouping the document tree into LaTeX files. List of tuples # (source start file, target name, title, # author, documentclass [howto, manual, or own class]). latex_documents = [ (master_doc, 'emodpy-malaria-docs.tex', u'emodpy-malaria', u'Institute for Disease Modeling', 'manual'), ] # The name of an image file (relative to this directory) to place at the top of # the title page. # # latex_logo = None # For "manual" documents, if this is true, then toplevel headings are parts, # not chapters. # # latex_use_parts = False # If true, show page references after internal links. # # latex_show_pagerefs = False # If true, show URL addresses after external links. # # latex_show_urls = False # Documents to append as an appendix to all manuals. # # latex_appendices = [] # It false, will not define \strong, \code, itleref, \crossref ... but only # \sphinxstrong, ..., \sphinxtitleref, ... To help avoid clash with user added # packages. # # latex_keep_old_macro_names = True # If false, no module index is generated. # # latex_domain_indices = True # -- Options for manual page output --------------------------------------- # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ (master_doc, 'emodpy-malaria-docs', u'emodpy-malaria', [author], 1) ] # If true, show URL addresses after external links. # man_show_urls = True # -- Options for Texinfo output ------------------------------------------- # Grouping the document tree into Texinfo files. List of tuples # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ (master_doc, 'emodpy-malaria-docs', u'emodpy-malaria', author, 'Institute for Disease Modeling', 'How to use emodpy for malaria simulations.', 'Miscellaneous'), ] # Documents to append as an appendix to all manuals. # # texinfo_appendices = [] # If false, no module index is generated. # # texinfo_domain_indices = True # How to display URL addresses: 'footnote', 'no', or 'inline'. # # texinfo_show_urls = 'footnote' # If true, do not generate a @detailmenu in the "Top" node's menu. # # texinfo_no_detailmenu = False # Example configuration for intersphinx: refer to the Python standard library. intersphinx_mapping = {'python': ('https://docs.python.org/3', None), 'emod_api': ('https://docs.idmod.org/projects/emod-api/en/latest/', None), 'emodpy': ('https://docs.idmod.org/projects/emodpy/en/latest/', None), 'idmtools': ('https://docs.idmod.org/projects/idmtools/en/latest/', None), 'emod-malaria': ('https://docs.idmod.org/projects/emod-malaria/en/latest/', None), 'pycomps': ('https://docs.idmod.org/projects/pycomps/en/latest/', None) } ########################################################################### # auto-created readthedocs.org specific configuration # ########################################################################### # # The following code was added during an automated build on readthedocs.org # It is auto created and injected for every build. The result is based on the # conf.py.tmpl file found in the readthedocs.org codebase: # https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl # # Note: this file shouldn't rely on extra dependencies. import importlib import sys import os.path # Borrowed from six. PY3 = sys.version_info[0] == 3 string_types = str if PY3 else basestring from sphinx import version_info # Get suffix for proper linking to GitHub # This is deprecated in Sphinx 1.3+, # as each page can have its own suffix if globals().get('source_suffix', False): if isinstance(source_suffix, string_types): SUFFIX = source_suffix elif isinstance(source_suffix, (list, tuple)): # Sphinx >= 1.3 supports list/tuple to define multiple suffixes SUFFIX = source_suffix[0] elif isinstance(source_suffix, dict): # Sphinx >= 1.8 supports a mapping dictionary for multiple suffixes SUFFIX = list(source_suffix.keys())[0] # make a ``list()`` for py2/py3 compatibility else: # default to .rst SUFFIX = '.rst' else: SUFFIX = '.rst' # Add RTD Static Path. Add to the end because it overwrites previous files. if not 'html_static_path' in globals(): html_static_path = [] if os.path.exists('_static'): html_static_path.append('_static') # Add RTD Theme only if they aren't overriding it already using_rtd_theme = ( ( 'html_theme' in globals() and html_theme in ['default'] and # Allow people to bail with a hack of having an html_style 'html_style' not in globals() ) or 'html_theme' not in globals() ) if using_rtd_theme: theme = importlib.import_module('sphinx_rtd_theme') html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(theme.get_html_theme_path()) else: html_theme_path = [theme.get_html_theme_path()] if globals().get('websupport2_base_url', False): websupport2_base_url = 'https://readthedocs.com/websupport' websupport2_static_url = 'https://assets.readthedocs.com/' #Add project information to the template context. context = { 'using_theme': using_rtd_theme, 'html_theme': html_theme, 'current_version': "latest", 'version_slug': "latest", 'MEDIA_URL': "https://media.readthedocs.com/media/", 'STATIC_URL': "https://assets.readthedocs.com/", 'PRODUCTION_DOMAIN': "readthedocs.com", 'versions': [ ("latest", "/en/latest/"), ("stable", "/en/stable/"), ("v0.0.61", "/en/v0.0.61/"), ("v0.0.50", "/en/v0.0.50/"), ("0.0.50", "/en/0.0.50/"), ("v0.0.48", "/en/v0.0.48/"), ("v0.0.45", "/en/v0.0.45/"), ("v0.0.44", "/en/v0.0.44/"), ("v0.0.29", "/en/v0.0.29/"), ("v0.0.18", "/en/v0.0.18/"), ], 'downloads': [ ("pdf", "//docs.idmod.org/_/downloads/emodpy-malaria/en/latest/pdf/"), ("html", "//docs.idmod.org/_/downloads/emodpy-malaria/en/latest/htmlzip/"), ], 'subprojects': [ ], 'slug': 'institute-for-disease-modeling-emodpy-malaria', 'name': u'emodpy-malaria', 'rtd_language': u'en', 'programming_language': u'words', 'canonical_url': 'https://docs.idmod.org/projects/emodpy-malaria/en/latest/', 'analytics_code': 'UA-87656833-3', 'single_version': False, 'conf_py_path': '/docs/', 'api_host': 'https://readthedocs.com', 'github_user': 'InstituteforDiseaseModeling', 'proxied_api_host': '/_', 'github_repo': 'emodpy-malaria', 'github_version': 'main', 'display_github': True, 'bitbucket_user': 'None', 'bitbucket_repo': 'None', 'bitbucket_version': 'main', 'display_bitbucket': False, 'gitlab_user': 'None', 'gitlab_repo': 'None', 'gitlab_version': 'main', 'display_gitlab': False, 'READTHEDOCS': True, 'using_theme': (html_theme == "default"), 'new_theme': (html_theme == "sphinx_rtd_theme"), 'source_suffix': SUFFIX, 'ad_free': False, 'docsearch_disabled': False, 'user_analytics_code': 'UA-87656833-3', 'global_analytics_code': 'UA-17997319-2', 'commit': '2e7c313f', } # For sphinx >=1.8 we can use html_baseurl to set the canonical URL. # https://www.sphinx-doc.org/en/master/usage/configuration.html#confval-html_baseurl if version_info >= (1, 8): if not globals().get('html_baseurl'): html_baseurl = context['canonical_url'] context['canonical_url'] = None if 'html_context' in globals(): html_context.update(context) else: html_context = context # Add custom RTD extension if 'extensions' in globals(): # Insert at the beginning because it can interfere # with other extensions. # See https://github.com/rtfd/readthedocs.org/pull/4054 extensions.insert(0, "readthedocs_ext.readthedocs") else: extensions = ["readthedocs_ext.readthedocs"] # Add External version warning banner to the external version documentation if 'branch' == 'external': extensions.insert(1, "readthedocs_ext.external_version_warning") readthedocs_vcs_url = 'None' readthedocs_build_url = 'https://readthedocs.com/projects/institute-for-disease-modeling-emodpy-malaria/builds/750463/' project_language = 'en' # User's Sphinx configurations language_user = globals().get('language', None) latex_engine_user = globals().get('latex_engine', None) latex_elements_user = globals().get('latex_elements', None) # Remove this once xindy gets installed in Docker image and XINDYOPS # env variable is supported # https://github.com/rtfd/readthedocs-docker-images/pull/98 latex_use_xindy = False chinese = any([ language_user in ('zh_CN', 'zh_TW'), project_language in ('zh_CN', 'zh_TW'), ]) japanese = any([ language_user == 'ja', project_language == 'ja', ]) if chinese: latex_engine = latex_engine_user or 'xelatex' latex_elements_rtd = { 'preamble': '\\usepackage[UTF8]{ctex}\n', } latex_elements = latex_elements_user or latex_elements_rtd elif japanese: latex_engine = latex_engine_user or 'platex' # Make sure our build directory is always excluded exclude_patterns = globals().get('exclude_patterns', []) exclude_patterns.extend(['_build']) [rtd-command-info] start-time: 2021-10-19T19:40:32.987761Z, end-time: 2021-10-19T19:40:39.293749Z, duration: 6, exit-code: 0 python -m sphinx -T -E -W --keep-going -b html -d _build/doctrees -D language=en . _build/html Running Sphinx v3.3.1 rm: cannot remove 'modules.rst': No such file or directory make: [generate-api] Error 1 (ignored) rm: cannot remove 'emodpy_malaria_index.rst': No such file or directory make: [generate-api] Error 1 (ignored) loading translations [en]... done making output directory... done loading intersphinx inventory from https://docs.python.org/3/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/emod-api/en/latest/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/emodpy/en/latest/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/idmtools/en/latest/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/emod-malaria/en/latest/objects.inv... loading intersphinx inventory from https://docs.idmod.org/projects/pycomps/en/latest/objects.inv... building [mo]: targets for 0 po files that are out of date building [html]: targets for 29 source files that are out of date updating environment: [new config] 29 added, 0 changed, 0 removed reading sources... [ 3%] emodpy_malaria reading sources... [ 6%] emodpy_malaria.demographics reading sources... [ 10%] emodpy_malaria.demographics.MalariaDemographics reading sources... [ 13%] emodpy_malaria.interventions reading sources... [ 17%] emodpy_malaria.interventions.bednet reading sources... [ 20%] emodpy_malaria.interventions.common reading sources... [ 24%] emodpy_malaria.interventions.community_health_worker reading sources... [ 27%] emodpy_malaria.interventions.diag_survey reading sources... [ 31%] emodpy_malaria.interventions.drug reading sources... [ 34%] emodpy_malaria.interventions.drug_campaign reading sources... [ 37%] emodpy_malaria.interventions.inputeir reading sources... [ 41%] emodpy_malaria.interventions.irs reading sources... [ 44%] emodpy_malaria.interventions.ivermectin reading sources... [ 48%] emodpy_malaria.interventions.mosquitorelease reading sources... [ 51%] emodpy_malaria.interventions.outbreak reading sources... 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[100%] installation-basic looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 3%] emodpy_malaria writing output... [ 6%] emodpy_malaria.demographics writing output... [ 10%] emodpy_malaria.demographics.MalariaDemographics writing output... [ 13%] emodpy_malaria.interventions writing output... [ 17%] emodpy_malaria.interventions.bednet writing output... [ 20%] emodpy_malaria.interventions.common writing output... [ 24%] emodpy_malaria.interventions.community_health_worker writing output... [ 27%] emodpy_malaria.interventions.diag_survey writing output... [ 31%] emodpy_malaria.interventions.drug writing output... [ 34%] emodpy_malaria.interventions.drug_campaign writing output... [ 37%] emodpy_malaria.interventions.inputeir writing output... [ 41%] emodpy_malaria.interventions.irs writing output... [ 44%] emodpy_malaria.interventions.ivermectin writing output... [ 48%] emodpy_malaria.interventions.mosquitorelease writing output... [ 51%] emodpy_malaria.interventions.outbreak writing output... [ 55%] emodpy_malaria.interventions.outdoorrestkill writing output... [ 58%] emodpy_malaria.interventions.spacespraying writing output... [ 62%] emodpy_malaria.interventions.sugartrap writing output... [ 65%] emodpy_malaria.interventions.treatment_seeking writing output... [ 68%] emodpy_malaria.interventions.udbednet writing output... [ 72%] emodpy_malaria.malaria_config writing output... [ 75%] emodpy_malaria.reporters writing output... [ 79%] emodpy_malaria.reporters.builtin writing output... [ 82%] emodpy_malaria.vector_config writing output... [ 86%] emodpy_malaria_index writing output... [ 89%] faq writing output... [ 93%] index writing output... [ 96%] installation writing output... [100%] installation-basic generating indices... genindex py-modindex done writing additional pages... search opensearch done copying static files... done copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done build succeeded. The HTML pages are in _build/html. Updating searchtools for Read the Docs search... [rtd-command-info] start-time: 2021-10-19T19:40:39.458180Z, end-time: 2021-10-19T19:40:41.660188Z, duration: 2, exit-code: 0 python -m sphinx -T -W --keep-going -b readthedocssinglehtmllocalmedia -d _build/doctrees -D language=en . _build/localmedia Running Sphinx v3.3.1 rm: cannot remove 'modules.rst': No such file or directory make: [generate-api] Error 1 (ignored) loading translations [en]... done making output directory... done loading pickled environment... done building [mo]: targets for 0 po files that are out of date building [readthedocssinglehtmllocalmedia]: all documents updating environment: 0 added, 1 changed, 0 removed reading sources... [100%] emodpy_malaria_index looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done assembling single document... installation installation-basic faq emodpy_malaria_index emodpy_malaria emodpy_malaria.demographics emodpy_malaria.demographics.MalariaDemographics emodpy_malaria.interventions emodpy_malaria.interventions.bednet emodpy_malaria.interventions.common emodpy_malaria.interventions.community_health_worker emodpy_malaria.interventions.diag_survey emodpy_malaria.interventions.drug emodpy_malaria.interventions.drug_campaign emodpy_malaria.interventions.inputeir emodpy_malaria.interventions.irs emodpy_malaria.interventions.ivermectin emodpy_malaria.interventions.mosquitorelease emodpy_malaria.interventions.outbreak emodpy_malaria.interventions.outdoorrestkill emodpy_malaria.interventions.spacespraying emodpy_malaria.interventions.sugartrap emodpy_malaria.interventions.treatment_seeking emodpy_malaria.interventions.udbednet emodpy_malaria.reporters emodpy_malaria.reporters.builtin emodpy_malaria.malaria_config emodpy_malaria.vector_config done writing... done writing additional files... opensearchdone copying static files... done copying extra files... done dumping object inventory... done build succeeded. The HTML page is in _build/localmedia. Updating searchtools for Read the Docs search... [rtd-command-info] start-time: 2021-10-19T19:40:41.811526Z, end-time: 2021-10-19T19:40:43.917632Z, duration: 2, exit-code: 0 python -m sphinx -b latex -D language=en -d _build/doctrees . _build/latex Running Sphinx v3.3.1 rm: cannot remove 'modules.rst': No such file or directory make: [generate-api] Error 1 (ignored) loading translations [en]... done making output directory... done loading pickled environment... done building [mo]: targets for 0 po files that are out of date building [latex]: all documents updating environment: 0 added, 1 changed, 0 removed reading sources... [100%] emodpy_malaria_index looking for now-outdated files... none found pickling environment... done checking consistency... done processing emodpy-malaria-docs.tex... index installation installation-basic faq emodpy_malaria_index emodpy_malaria emodpy_malaria.demographics emodpy_malaria.demographics.MalariaDemographics emodpy_malaria.interventions emodpy_malaria.interventions.bednet emodpy_malaria.interventions.common emodpy_malaria.interventions.community_health_worker emodpy_malaria.interventions.diag_survey emodpy_malaria.interventions.drug emodpy_malaria.interventions.drug_campaign emodpy_malaria.interventions.inputeir emodpy_malaria.interventions.irs emodpy_malaria.interventions.ivermectin emodpy_malaria.interventions.mosquitorelease emodpy_malaria.interventions.outbreak emodpy_malaria.interventions.outdoorrestkill emodpy_malaria.interventions.spacespraying emodpy_malaria.interventions.sugartrap emodpy_malaria.interventions.treatment_seeking emodpy_malaria.interventions.udbednet emodpy_malaria.reporters emodpy_malaria.reporters.builtin emodpy_malaria.malaria_config emodpy_malaria.vector_config resolving references... done writing... done copying TeX support files... copying TeX support files... done build succeeded. The LaTeX files are in _build/latex. Run 'make' in that directory to run these through (pdf)latex (use `make latexpdf' here to do that automatically). WARNING: Missing searchtools: /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/checkouts/latest/docs/_build/latex/_static/searchtools.js [rtd-command-info] start-time: 2021-10-19T19:40:44.464693Z, end-time: 2021-10-19T19:40:45.071490Z, duration: 0, exit-code: 0 cat latexmkrc $latex = 'latex ' . $ENV{'LATEXOPTS'} . ' %O %S'; $pdflatex = 'pdflatex ' . $ENV{'LATEXOPTS'} . ' %O %S'; $lualatex = 'lualatex ' . $ENV{'LATEXOPTS'} . ' %O %S'; $xelatex = 'xelatex --no-pdf ' . $ENV{'LATEXOPTS'} . ' %O %S'; $makeindex = 'makeindex -s python.ist %O -o %D %S'; add_cus_dep( "glo", "gls", 0, "makeglo" ); sub makeglo { return system( "makeindex -s gglo.ist -o '$_[0].gls' '$_[0].glo'" ); } [rtd-command-info] start-time: 2021-10-19T19:40:45.189591Z, end-time: 2021-10-19T19:40:47.814202Z, duration: 2, exit-code: 0 latexmk -r latexmkrc -pdf -f -dvi- -ps- -jobname=institute-for-disease-modeling-emodpy-malaria -interaction=nonstopmode Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 1, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 2, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 3, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 10) line 4, chunk 1. Subroutine makeglo redefined at (eval 11) line 7, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 1, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 2, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 3, chunk 1. Use of uninitialized value $ENV{"LATEXOPTS"} in concatenation (.) or string at (eval 11) line 4, chunk 1. Latexmk: This is Latexmk, John Collins, 1 January 2015, version: 4.41. File::Glob::glob() will disappear in perl 5.30. Use File::Glob::bsd_glob() instead. at /usr/bin/latexmk line 7482. Rule 'pdflatex': Rules & subrules not known to be previously run: pdflatex Rule 'pdflatex': The following rules & subrules became out-of-date: 'pdflatex' ------------ Run number 1 of rule 'pdflatex' ------------ ------------ Running 'pdflatex -interaction=nonstopmode -recorder --jobname="institute-for-disease-modeling-emodpy-malaria" "emodpy-malaria-docs.tex"' ------------ Latexmk: applying rule 'pdflatex'... This is pdfTeX, Version 3.14159265-2.6-1.40.18 (TeX Live 2017/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./emodpy-malaria-docs.tex LaTeX2e <2017-04-15> Babel <3.18> and hyphenation patterns for 84 language(s) loaded. 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(/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd)<><><><> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] [2] [1] [2] [1] [2] Chapter 1. LaTeX Warning: Hyper reference `installation-basic::doc' on page 3 undefined on input line 114. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) [3] [4] Chapter 2. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [5] Underfull \hbox (badness 10000) in paragraph at lines 319--321 []\T1/ptm/m/n/10 Install at a com-mand [6] [7] [8] Chapter 3. 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lines 959--959 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 ing_properties: Overfull \hbox (9.814pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 ing_duration: Overfull \hbox (29.97432pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (47.68343pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 check_eligibility_at_trigger: Overfull \hbox (9.71407pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 pire_recent_drugs: LaTeX Warning: Hyper 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[17] Underfull \hbox (badness 10000) in paragraph at lines 992--995 []\T1/pcr/b/n/10 diagnostic_type \T1/ptm/m/n/10 ^^U Type of malaria di-ag-nos-t ic used. De-fault is Underfull \hbox (badness 10000) in paragraph at lines 1034--1037 []\T1/ptm/m/n/10 In ga-me-to-cytes/microliter, use mea-sure- LaTeX Warning: Hyper reference `emodpy_malaria.interventions.common:emodpy_mala ria.interventions.common.MalariaDiagnostic' on page 18 undefined on input line 1058. Underfull \hbox (badness 10000) in paragraph at lines 1057--1059 []\T1/pcr/b/n/10 measurement_sensitivity \T1/ptm/m/n/10 ^^U Set-ting for \T1/pt m/b/n/10 Mea-sure-ment_Sensitivity \T1/ptm/m/n/10 in [18] Underfull \hbox (badness 10000) in paragraph at lines 1080--1085 []\T1/pcr/b/n/10 IP_restrictions \T1/ptm/m/n/10 ^^U List of In-di-vid-u-al-Prop -erty key:value pairs that Underfull \hbox (badness 10000) in paragraph at lines 1080--1085 \T1/ptm/m/n/10 in-di-vid-u-als must have to re-ceive the di-ag-nos-tic in-ter-v en-tion. For Underfull \hbox (badness 10000) in paragraph at lines 1080--1085 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue 1"}, Underfull \hbox (badness 10000) in paragraph at lines 1087--1092 []\T1/pcr/b/n/10 NP_restrictions \T1/ptm/m/n/10 ^^U List of Node-Prop-erty key: value pairs Underfull \hbox (badness 10000) in paragraph at lines 1087--1092 \T1/ptm/m/n/10 that nodes must have to re-ceive the di-ag-nos-tic in-ter-ven-ti on. Underfull \hbox (badness 10000) in paragraph at lines 1087--1092 \T1/ptm/m/n/10 For ex-am-ple, \T1/pcr/m/n/10 [{"NodeProperty1":"PropertyValue1" }, Underfull \hbox (badness 10000) in paragraph at lines 1094--1098 []\T1/pcr/b/n/10 disqualifying_properties \T1/ptm/m/n/10 ^^U List of In-di-vid- u-al-Prop-erty Underfull \hbox (badness 10000) in paragraph at lines 1094--1098 \T1/ptm/m/n/10 key:value pairs that cause an in-ter-ven-tion to be aborted. For ex- Underfull \hbox (badness 10000) in paragraph at lines 1094--1098 \T1/ptm/m/n/10 am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue1"} , Underfull \hbox (badness 10000) in paragraph at lines 1117--1120 []\T1/pcr/b/n/10 expire_recent_drugs \T1/ptm/m/n/10 ^^U Adds \T1/pcr/m/n/10 [{" DrugStatus:None"}] \T1/ptm/m/n/10 to \T1/ptm/b/n/10 Prop- [19] Underfull \hbox (badness 10000) in paragraph at lines 1206--1206 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1206--1206 \T1/ptm/m/it/10 drug_code: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cam- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 paign_type: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 MDA\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6775) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: Overfull \hbox (19.21352pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 7344) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag- Overfull \hbox (51.55446pt too wide) in paragraph at lines 1237--1237 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 = 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 fmda_radius: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (6.22408pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 5667) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 balls: [][]int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 treat-ment_delay: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Overfull \hbox (17.97432pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 tar-get_group: Overfull \hbox (33.88365pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (33.19351pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (26.53346pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ing_properties: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ent_drug_configs: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 get_residents_only: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (35.68343pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 False\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Overfull \hbox (144.47322pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ing_drugs_event_name=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Received _Campaign_Drugs\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) [20] [21] [22] Underfull \hbox (badness 10000) in paragraph at lines 1388--1391 []\T1/pcr/b/n/10 ind_property_restrictions \T1/ptm/m/n/10 ^^U The set-ting for \T1/ptm/b/n/10 Prop- Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (57.71327pt too wide) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e-ti-tions: [][]int[ ][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 6348) in paragraph at lines 1433--1433 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][] list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (86.50304pt too wide) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 6032) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 ing_properties: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 trig-ger_condition_list: [][]list[][] = LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 23 undefined on input line 1435. [23] Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 7504) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 treat-ment_delay: [][]int[ ][] Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure-ment_sensitivity: Underfull \hbox (badness 6063) in paragraph at lines 1448--1448 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [ ][]list[][] Overfull \hbox (92.50304pt too wide) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 check_eligibility_at_trigger: LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 24 undefined on input line 1450. Underfull \hbox (badness 10000) in paragraph at lines 1449--1452 \T1/ptm/m/n/10 Add an MSAT (mass screen-ing and treat-ment) drug in-ter-ven-tio n to your cam-paign. See [24] Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 7221) in paragraph at lines 1463--1463 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [ ][]float[][] Underfull \hbox (badness 7595) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (92.50304pt too wide) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 25 undefined on input line 1465. Underfull \hbox (badness 7869) in paragraph at lines 1464--1467 \T1/ptm/m/n/10 Add an fMDA (fo-cal mass drug ad-min-is-tra-tion) drug in-ter-ve n-tion to your cam-paign. See Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 6141) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (75.71327pt too wide) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Overfull \hbox (9.55446pt too wide) in paragraph at lines 1478--1478 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (104.50304pt too wide) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 25 undefined on input line 1480. [25] Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (69.71327pt too wide) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 7613) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_covera ge: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS-TANCE_ONLY\ TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 node_ids: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (98.50304pt too wide) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- LaTeX Warning: Hyper reference `emodpy_malaria.interventions.drug_campaign:emod py_malaria.interventions.drug_campaign.add_drug_campaign' on page 26 undefined on input line 1495. Underfull \hbox (badness 10000) in paragraph at lines 1508--1508 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ev ent_trigger: [26] Underfull \hbox (badness 5091) in paragraph at lines 1571--1571 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][]l ist[][] = None\T1/ptm/m/n/10 , [27] Underfull \hbox (badness 10000) in paragraph at lines 1608--1608 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1608--1608 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 5274) in paragraph at lines 1644--1644 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Underfull \hbox (badness 10000) in paragraph at lines 1644--1644 \T1/ptm/m/it/10 killing_eff=1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- Underfull \hbox (badness 10000) in paragraph at lines 1644--1644 \T1/ptm/m/it/10 sec-ti-cide=None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1665--1665 []\T1/ptm/m/it/10 schema_path_container\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1665--1665 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 1665--1665 \T1/ptm/m/it/10 killing_exponential_decay_rate: [28] Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 re-leased_number: Underfull \hbox (badness 5954) in paragraph at lines 1708--1708 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 leased_fraction: Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 leased_infectious: Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 leased_species: Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 re-leased_genome: Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1728--1730 []\T1/pcr/b/n/10 released_infectious \T1/ptm/m/n/10 ^^U The frac-tion of vec-to rs re-leased that Underfull \hbox (badness 10000) in paragraph at lines 1728--1730 \T1/ptm/m/n/10 are to be in-fec-tious. One can only use this fea-ture when Overfull \hbox (16.27205pt too wide) in paragraph at lines 1728--1730 \T1/ptm/m/n/10 `Malaria_Model'!='MALARIA_MECHANISTIC_MODEL_WITH_PARASITE_GENETI CS' Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (16.35448pt too wide) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 file- Overfull \hbox (2.35487pt too wide) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [29] Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Overfull \hbox (2.73457pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (14.36418pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (52.97314pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (32.53346pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (39.19351pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 5359) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ig- Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 bool[][] = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (16.02399pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 tion_period_override: [30] Underfull \hbox (badness 5893) in paragraph at lines 1804--1806 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Overfull \hbox (5.18481pt too wide) in paragraph at lines 1859--1859 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 de-mo- Overfull \hbox (38.73457pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 float[][] = Overfull \hbox (50.36418pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (2.6847pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 tions: Overfull \hbox (88.97314pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , Overfull \hbox (68.53346pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (75.19351pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 tar- Overfull \hbox (17.93463pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Overfull \hbox (19.59468pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (11.3646pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 str[][] = Overfull \hbox (26.75435pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (52.02399pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5077) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = - Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cre- Overfull \hbox (90.54375pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 ate_nucleotide_sequence_from: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BAR- Overfull \hbox (33.99452pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 CODE_STRING\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 bar- Overfull \hbox (13.79442pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 code_string: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (52.88371pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 drug_resistant_string: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (43.23422pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 msp_variant_value: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (64.34395pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 pfemp1_variants_values: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 bar- Overfull \hbox (155.51305pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 code_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (194.60234pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 drug_resistant_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = [31] Overfull \vbox (135.66997pt too high) has occurred while \output is active [32] Underfull \hbox (badness 5893) in paragraph at lines 1886--1888 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [33] Overfull \hbox (11.18481pt too wide) in paragraph at lines 1975--1975 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 de-mo- Overfull \hbox (44.73457pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 float[][] Underfull \hbox (badness 8151) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tar- Overfull \hbox (56.36418pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tions: Overfull \hbox (94.97314pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.19351pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tar- Overfull \hbox (23.93463pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (25.59468pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tar- Overfull \hbox (17.3646pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 ig- Overfull \hbox (32.75435pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (58.02399pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Overfull \hbox (10.34447pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 irbc_type: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 mi- Overfull \hbox (42.5643pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 nor_epitope_type: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (10.3446pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 msp_type: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = [34] Overfull \vbox (3.66997pt too high) has occurred while \output is active [35] Underfull \hbox (badness 5893) in paragraph at lines 2002--2004 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e- Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (22.97314pt too wide) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (2.53346pt too wide) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (9.19351pt too wide) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 get_age_min: [][]int[][] = [36] Underfull \hbox (badness 5893) in paragraph at lines 2086--2088 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [37] Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 \T1/ptm/m/it/10 cide_name: Overfull \hbox (29.51352pt too wide) in paragraph at lines 2127--2127 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (32.87419pt too wide) in paragraph at lines 2127--2127 \T1/ptm/m/it/10 killing_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (74.87367pt too wide) in paragraph at lines 2127--2127 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2169--2169 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spray_coverage: [38] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2194--2194 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2194--2194 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2194--2194 \T1/ptm/m/it/10 file- Underfull \hbox (badness 10000) in paragraph at lines 2194--2194 \T1/ptm/m/it/10 name: Underfull \hbox (badness 10000) in paragraph at lines 2194--2194 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 6893) in paragraph at lines 2211--2211 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[] [] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2255--2255 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , [39] Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 tar-gets: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 drug: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.88365pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 6204) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du- Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 ra-tion: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 broad- Overfull \hbox (41.29442pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 cast_event_name: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Overfull \hbox (18.86435pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 ceivedTreat- Underfull \hbox (badness 10000) in paragraph at lines 2291--2295 []\T1/pcr/b/n/10 of individuals to target with the intervention. Default is Underfull \hbox (badness 10000) in paragraph at lines 2291--2295 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 properties\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 [ { "trigger":"NewClinicalCase","coverage":0. Underfull \hbox (badness 10000) in paragraph at lines 2291--2295 \T1/pcr/m/n/10 8,"agemin":15,"agemax":70, "seek":0.4,"rate":0.3}, Underfull \hbox (badness 10000) in paragraph at lines 2291--2295 \T1/pcr/m/n/10 {"trigger":"NewSevereCase","coverage":0.8,"seek":0.6, Underfull \hbox (badness 10000) in paragraph at lines 2309--2310 []\T1/pcr/b/n/10 must have to receive the intervention. For example, Underfull \hbox (badness 10000) in paragraph at lines 2309--2310 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 individuals\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 ["IndividualProperty1:PropertyValue1", [40] Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis- Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 \T1/ptm/m/it/10 0.0013698630136986301\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_e ff: Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 \T1/ptm/m/it/10 0.0006849315068493151\T1/ptm/m/n/10 , \T1/ptm/m/it/10 iv_name: Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Us-ageDe-pen-de ntBed-net\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 \T1/ptm/m/it/10 sonal_dependence: [][]dict[][] = None\T1/ptm/m/n/10 , [41] [42] Underfull \hbox (badness 10000) in paragraph at lines 2538--2538 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2538--2538 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [43] Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 clude_vector_state: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 strat- Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 ify_by: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 GENOME\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 com- Overfull \hbox (9.02399pt too wide) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 bine_similar_genomes: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spe- Overfull \hbox (102.76315pt too wide) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 cific_genome_combinations_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Overfull \hbox (64.54318pt too wide) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 lele_combinations_for_stratification: Overfull \hbox (2.32376pt too wide) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 les_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [44] Underfull \hbox (badness 10000) in paragraph at lines 2633--2633 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 6893) in paragraph at lines 2652--2652 \T1/ptm/m/it/10 = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 \T1/ptm/m/it/10 ual_property_filter: Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 in-fec- Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 \T1/ptm/m/it/10 tious-ness_bins: Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (4.30418pt too wide) in paragraph at lines 2652--2652 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 7291) in paragraph at lines 2652--2652 [][]\T1/ptm/m/it/10 int[][] = 100\T1/ptm/m/n/10 , \T1/ptm/m/it/10 par-a- Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [45] Underfull \hbox (badness 10000) in paragraph at lines 2713--2713 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i- Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 nodes: Overfull \hbox (3.20416pt too wide) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 pretty_format: Overfull \hbox (15.2441pt too wide) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 port_description: [46] Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 start_day: Overfull \hbox (6.45485pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 re-port- Overfull \hbox (21.46431pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 re- Overfull \hbox (28.1245pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 port_filename: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Spa- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 tial-Re- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 port- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 Malar- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 i-aFil- Overfull \hbox (13.23434pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 spa- Overfull \hbox (56.87419pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 tial_output_channels: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 list[][] = [47] Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 ^^PBlood_Smear_Gametocyte_Prevalence^^Q, ^^PBlood_Smear_Parasite _Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 ^^PCam-paign_Cost^^Q, ^^PDaily_Bites_Per_Human^^Q, ^^PDaily_EIR^ ^Q, ^^PDis-ease_Deaths^^Q, Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 ^^PNew_Reported_Infections^^Q, ^^PNew_Severe_Cases^^Q, ^^PPCR_Ga metocyte_Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 ^^PPCR_Parasite_Prevalence^^Q, ^^PPfHRP2_Prevalence^^Q, ^^PPop-u -la-tion^^Q, ^^PPreva- Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 lence^^Q, ^^PRain-fall^^Q, ^^PRel-a-tive_Humidity^^Q, ^^PTrue_Pr evalence^^Q De-faults: Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 6893) in paragraph at lines 2818--2818 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 2839--2839 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 2839--2839 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- Underfull \hbox (badness 10000) in paragraph at lines 2839--2839 \T1/ptm/m/it/10 clude_infection_table: Underfull \hbox (badness 10000) in paragraph at lines 2839--2839 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- [48] Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 re-port-ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Overfull \hbox (10.30418pt too wide) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 port_description: [49] Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (10.30418pt too wide) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (20.78384pt too wide) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 port_description: [50] Underfull \hbox (badness 10000) in paragraph at lines 3052--3052 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3052--3052 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (26.78384pt too wide) in paragraph at lines 3052--3052 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 6526) in paragraph at lines 3052--3052 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3052--3052 \T1/ptm/m/it/10 ify_by_gender: Overfull \hbox (47.85474pt too wide) in paragraph at lines 3086--3086 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (49.79494pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 man- Overfull \hbox (35.35486pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 i- Overfull \hbox (45.63463pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (46.26491pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 bar- Overfull \hbox (55.34474pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 codes: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (122.7736pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 drug_resistant_strings: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (148.3231pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 drug_resistant_statistic_type: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (240.52356pt too wide) in paragraph at lines 3086--3086 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 NUM_PEOPLE_WITH_RESISTANT_INFECTION\TS1/ptm/m /it/10 '\T1/ptm/m/n/10 , Overfull \hbox (68.48471pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 age_bins: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (40.35486pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 in- Overfull \hbox (40.35486pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 di- Overfull \hbox (44.7948pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 vid- Overfull \hbox (128.78384pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 ual_property_to_collect: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (36.0248pt too wide) in paragraph at lines 3086--3086 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Overfull \hbox (50.76463pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 strat- Overfull \hbox (89.68442pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 ify_by_gender: Overfull \hbox (39.8048pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (40.24501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 1\T1/pcr/m/n/10 ) [51] [52] Underfull \hbox (badness 10000) in paragraph at lines 3137--3137 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Overfull \hbox (17.85474pt too wide) in paragraph at lines 3166--3166 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (19.79494pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 man- Overfull \hbox (5.35486pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 i- Overfull \hbox (15.63463pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (48.68404pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 species_list: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (22.85487pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (20.76463pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 strat- Overfull \hbox (60.89413pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 ify_by_species: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 in- Overfull \hbox (70.75449pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 clude_wolbachia: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 in- Overfull \hbox (65.80426pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 clude_gestation: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (16.26491pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 bar- Overfull \hbox (25.34474pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 codes: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (26.35487pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [53] Underfull \hbox (badness 10000) in paragraph at lines 3206--3206 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3206--3206 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 3206--3206 \T1/ptm/m/it/10 En-abled: bool = Underfull \hbox (badness 10000) in paragraph at lines 3254--3254 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3254--3254 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 3254--3254 \T1/ptm/m/it/10 En-abled: bool = [54] Underfull \hbox (badness 10000) in paragraph at lines 3278--3278 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3278--3278 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3278--3278 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 3278--3278 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (55.2345pt too wide) in paragraph at lines 3303--3303 []\T1/ptm/m/it/10 class_name: Overfull \hbox (15.80469pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 str Overfull \hbox (11.99501pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 = Overfull \hbox (28.85487pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (18.57497pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 pa- Overfull \hbox (24.53493pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 ram- Overfull \hbox (13.01491pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 e- Overfull \hbox (23.4746pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 ters: Overfull \hbox (20.24474pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 dict Overfull \hbox (11.99501pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 = Overfull \hbox (27.5448pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (19.68495pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 En- Overfull \hbox (30.7948pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 abled: Overfull \hbox (23.0249pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 = Overfull \hbox (26.08485pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (66.5943pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (23.0249pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 = Overfull \hbox (29.58485pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 5832) in paragraph at lines 3306--3311 \T1/ptm/m/n/10 The re-port can only be used when the sim-u-la-tion setup pa-ram -e-ter \T1/ptm/b/n/10 Malaria_Model \T1/ptm/m/n/10 is set to Overfull \hbox (13.2345pt too wide) in paragraph at lines 3328--3328 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 bool = [55] Underfull \hbox (badness 10000) in paragraph at lines 3353--3353 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 3353--3353 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 6236) in paragraph at lines 3401--3401 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 3401--3401 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3401--3401 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , [56] Underfull \hbox (badness 10000) in paragraph at lines 3425--3425 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 3425--3425 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 3425--3425 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 3425--3425 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 3425--3425 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 3454--3454 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3454--3454 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 3454--3454 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3454--3454 \T1/ptm/m/it/10 En-abled: Overfull \hbox (6.5943pt too wide) in paragraph at lines 3454--3454 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 3498--3498 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 bool = [57] Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 str = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 bool = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (67.2345pt too wide) in paragraph at lines 3545--3545 []\T1/ptm/m/it/10 class_name: Overfull \hbox (27.80469pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 str Overfull \hbox (23.99501pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 = Overfull \hbox (40.85487pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (30.57497pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 pa- Overfull \hbox (36.53493pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 ram- Overfull \hbox (25.01491pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 e- Overfull \hbox (35.4746pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 ters: Overfull \hbox (32.24474pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 dict Overfull \hbox (23.99501pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 = Overfull \hbox (39.5448pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (31.68495pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 En- Overfull \hbox (42.7948pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 abled: Overfull \hbox (35.0249pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 = Overfull \hbox (38.08485pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (78.5943pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (35.0249pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 = Overfull \hbox (41.58485pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) [58] Underfull \hbox (badness 10000) in paragraph at lines 3573--3573 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 3573--3573 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 3573--3573 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 3573--3573 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 3573--3573 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (37.2345pt too wide) in paragraph at lines 3597--3597 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 str Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 = Overfull \hbox (10.85487pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (0.57497pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 pa- Overfull \hbox (6.53493pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 ram- Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 e- Overfull \hbox (5.4746pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 ters: Overfull \hbox (2.24474pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 dict Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 = Overfull \hbox (9.5448pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (1.68495pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 En- Overfull \hbox (12.7948pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 abled: Overfull \hbox (5.0249pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 = Overfull \hbox (8.08485pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (48.5943pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (5.0249pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 = Overfull \hbox (11.58485pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) [59] Underfull \hbox (badness 10000) in paragraph at lines 3650--3650 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , Overfull \hbox (24.52415pt too wide) in paragraph at lines 3650--3650 \T1/ptm/m/it/10 var_gene_randomness_type: Underfull \hbox (badness 10000) in paragraph at lines 3650--3650 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3651--3653 \T1/ptm/m/n/10 Sets up the de-fault pa-ram-e-ters for par-a-site ge-net-ics sim -u-la-tions Malaria_Model = [60] [61] [62] [63] Underfull \hbox (badness 10000) in paragraph at lines 4033--4033 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , \T1/ptm/m/it/10 in-sec- Underfull \hbox (badness 6675) in paragraph at lines 4033--4033 \T1/ptm/m/it/10 ti-cide_name: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 5939) in paragraph at lines 4033--4033 \T1/ptm/m/it/10 species: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 al- Underfull \hbox (badness 6047) in paragraph at lines 4033--4033 \T1/ptm/m/it/10 block-ing: [][]float[][] = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4033--4033 \T1/ptm/m/it/10 pelling: [][]float[][] = 1.0\T1/ptm/m/n/10 , [64] [65] [66] LaTeX Warning: Reference `emodpy_malaria:module-emodpy_malaria' on page 67 unde fined on input line 4201. LaTeX Warning: Reference `emodpy_malaria.demographics:module-emodpy_malaria.dem ographics' on page 67 undefined on input line 4202. LaTeX Warning: Reference `emodpy_malaria.demographics.MalariaDemographics:modul e-emodpy_malaria.demographics.MalariaDemographics' on page 67 undefined on inpu t line 4203. Overfull \hbox (54.6225pt too wide) in paragraph at lines 4203--4204 []\T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions:module-emodpy_malaria.in terventions' on page 67 undefined on input line 4204. LaTeX Warning: Reference `emodpy_malaria.interventions.bednet:module-emodpy_mal aria.interventions.bednet' on page 67 undefined on input line 4205. LaTeX Warning: Reference `emodpy_malaria.interventions.common:module-emodpy_mal aria.interventions.common' on page 67 undefined on input line 4206. LaTeX Warning: Reference `emodpy_malaria.interventions.community_health_worker: module-emodpy_malaria.interventions.community_health_worker' on page 67 undefin ed on input line 4207. Overfull \hbox (84.6225pt too wide) in paragraph at lines 4207--4208 []\T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/m/ n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.diag_survey:module-emodp y_malaria.interventions.diag_survey' on page 67 undefined on input line 4208. Overfull \hbox (12.6225pt too wide) in paragraph at lines 4208--4209 []\T1/pcr/m/n/10 emodpy_malaria.interventions.diag_survey\T1/ptm/m/n/10 , LaTeX Warning: Reference `emodpy_malaria.interventions.drug:module-emodpy_malar ia.interventions.drug' on page 67 undefined on input line 4209. LaTeX Warning: Reference `emodpy_malaria.interventions.drug_campaign:module-emo dpy_malaria.interventions.drug_campaign' on page 67 undefined on input line 421 0. 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[67] No file institute-for-disease-modeling-emodpy-malaria.ind. (./institute-for-disease-modeling-emodpy-malaria.aux) Package rerunfilecheck Warning: File `institute-for-disease-modeling-emodpy-mal aria.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on institute-for-disease-modeling-emodpy-malaria.pdf (71 pages, 288140 bytes). Transcript written on institute-for-disease-modeling-emodpy-malaria.log. Latexmk: Index file 'institute-for-disease-modeling-emodpy-malaria.idx' was written Latexmk: Missing input file: 'institute-for-disease-modeling-emodpy-malaria.ind' from line 'No file institute-for-disease-modeling-emodpy-malaria.ind.' Latexmk: References changed. Latexmk: References changed. Latexmk: Log file says output to 'institute-for-disease-modeling-emodpy-malaria.pdf' Latexmk: Log file says output to 'institute-for-disease-modeling-emodpy-malaria.pdf' Latexmk: List of undefined refs and citations: Reference `emodpy_malaria.demographics.MalariaDemographics:module-emodpy_malaria.demographics.MalariaDemographics' on page 67 undefined on input line 4203 Reference `emodpy_malaria.demographics:module-emodpy_malaria.demographics' on page 67 undefined on input line 4202 Reference `emodpy_malaria.interventions.bednet:module-emodpy_malaria.interventions.bednet' on page 67 undefined on input line 4205 Reference `emodpy_malaria.interventions.common:module-emodpy_malaria.interventions.common' on page 67 undefined on input line 4206 Reference `emodpy_malaria.interventions.community_health_worker:module-emodpy_malaria.interventions.community_health_worker' on page 67 undefined on input line 4207 Reference `emodpy_malaria.interventions.diag_survey:module-emodpy_malaria.interventions.diag_survey' on page 67 undefined on input line 4208 Reference `emodpy_malaria.interventions.drug:module-emodpy_malaria.interventions.drug' on page 67 undefined on input line 4209 Reference `emodpy_malaria.interventions.drug_campaign:module-emodpy_malaria.interventions.drug_campaign' on page 67 undefined on input line 4210 Reference `emodpy_malaria.interventions.inputeir:module-emodpy_malaria.interventions.inputeir' on page 67 undefined on input line 4211 Reference `emodpy_malaria.interventions.irs:module-emodpy_malaria.interventions.irs' on page 67 undefined on input line 4212 Reference `emodpy_malaria.interventions.ivermectin:module-emodpy_malaria.interventions.ivermectin' on page 67 undefined on input line 4213 Reference `emodpy_malaria.interventions.mosquitorelease:module-emodpy_malaria.interventions.mosquitorelease' on page 67 undefined on input line 4214 Reference `emodpy_malaria.interventions.outbreak:module-emodpy_malaria.interventions.outbreak' on page 67 undefined on input line 4215 Reference `emodpy_malaria.interventions.outdoorrestkill:module-emodpy_malaria.interventions.outdoorrestkill' on page 67 undefined on input line 4216 Reference `emodpy_malaria.interventions.spacespraying:module-emodpy_malaria.interventions.spacespraying' on page 67 undefined on input line 4217 Reference `emodpy_malaria.interventions.sugartrap:module-emodpy_malaria.interventions.sugartrap' on page 67 undefined on input line 4218 Reference `emodpy_malaria.interventions.treatment_seeking:module-emodpy_malaria.interventions.treatment_seeking' on page 67 undefined on input line 4219 Reference `emodpy_malaria.interventions.udbednet:module-emodpy_malaria.interventions.udbednet' on page 67 undefined on input line 4220 Reference `emodpy_malaria.interventions:module-emodpy_malaria.interventions' on page 67 undefined on input line 4204 Reference `emodpy_malaria.malaria_config:module-emodpy_malaria.malaria_config' on page 67 undefined on input line 4221 Reference `emodpy_malaria.reporters.builtin:module-emodpy_malaria.reporters.builtin' on page 67 undefined on input line 4223 Reference `emodpy_malaria.reporters:module-emodpy_malaria.reporters' on page 67 undefined on input line 4222 Reference `emodpy_malaria.vector_config:module-emodpy_malaria.vector_config' on page 67 undefined on input line 4224 Reference `emodpy_malaria:module-emodpy_malaria' on page 67 undefined on input line 4201 Latexmk: Summary of warnings: Latex failed to resolve 24 reference(s) Rule 'makeindex institute-for-disease-modeling-emodpy-malaria.idx': File changes, etc: Non-existent destination files: 'institute-for-disease-modeling-emodpy-malaria.ind' ------------ Run number 1 of rule 'makeindex institute-for-disease-modeling-emodpy-malaria.idx' ------------ ------------ Running 'makeindex -s python.ist -o "institute-for-disease-modeling-emodpy-malaria.ind" "institute-for-disease-modeling-emodpy-malaria.idx"' ------------ Latexmk: applying rule 'makeindex institute-for-disease-modeling-emodpy-malaria.idx'... This is makeindex, version 2.15 [TeX Live 2017] (kpathsea + Thai support). Scanning style file ./python.ist.......done (7 attributes redefined, 0 ignored). Scanning input file institute-for-disease-modeling-emodpy-malaria.idx....done (179 entries accepted, 0 rejected). Sorting entries....done (1486 comparisons). Generating output file institute-for-disease-modeling-emodpy-malaria.ind....done (385 lines written, 0 warnings). Output written in institute-for-disease-modeling-emodpy-malaria.ind. Transcript written in institute-for-disease-modeling-emodpy-malaria.ilg. 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wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 du- Overfull \hbox (53.31496pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 ra- Overfull \hbox (60.13475pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 tion: Overfull \hbox (59.0249pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (97.43495pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 3.40282e+38\T1/ptm/m/n/10 , Overfull \hbox (52.35486pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 in- Overfull \hbox (55.48474pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 ter- Overfull \hbox (58.45485pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 ven- Overfull \hbox (89.57469pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 tion_config: Overfull \hbox (55.68495pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 any Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (147.144pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 max_distributed_per_day: Overfull \hbox (51.8048pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (86.5846pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 max_stock: Overfull \hbox (51.8048pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (61.80467pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 wait- Overfull \hbox (88.46458pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 ing_period: Overfull \hbox (51.8048pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (52.24501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 0\T1/pcr/m/n/10 ) [13] [14] Overfull \vbox (355.66753pt too high) has occurred while \output is active [15] [16] Overfull \hbox (31.21352pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 get: [][]ob-ject[][] Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 959--959 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 5203) in paragraph at lines 959--959 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag-nos- Overfull \hbox (63.55446pt too wide) in paragraph at lines 959--959 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 tic_threshold: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 float[][] = 40\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 mea-sure- Overfull \hbox (1.01384pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 event_name: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Di-ag- Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 nos-tic Sur-vey\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 959--959 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (27.58405pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 tive_diagnosis_configs: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 neg-a- Overfull \hbox (27.58405pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 tive_diagnosis_configs: Overfull \hbox (6.95406pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 ceived_test_event: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 ceived_Test\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 IP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 NP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 ing_properties: Overfull \hbox (9.814pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 ing_duration: Overfull \hbox (29.97432pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (47.68343pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 check_eligibility_at_trigger: Overfull \hbox (9.71407pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 pire_recent_drugs: [17] Underfull \hbox (badness 10000) in paragraph at lines 992--995 []\T1/pcr/b/n/10 diagnostic_type \T1/ptm/m/n/10 ^^U Type of malaria di-ag-nos-t ic used. De-fault is Underfull \hbox (badness 10000) in paragraph at lines 1034--1037 []\T1/ptm/m/n/10 In ga-me-to-cytes/microliter, use mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1057--1059 []\T1/pcr/b/n/10 measurement_sensitivity \T1/ptm/m/n/10 ^^U Set-ting for \T1/pt m/b/n/10 Mea-sure-ment_Sensitivity \T1/ptm/m/n/10 in [18] Underfull \hbox (badness 10000) in paragraph at lines 1080--1085 []\T1/pcr/b/n/10 IP_restrictions \T1/ptm/m/n/10 ^^U List of In-di-vid-u-al-Prop -erty key:value pairs that Underfull \hbox (badness 10000) in paragraph at lines 1080--1085 \T1/ptm/m/n/10 in-di-vid-u-als must have to re-ceive the di-ag-nos-tic in-ter-v en-tion. For Underfull \hbox (badness 10000) in paragraph at lines 1080--1085 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue 1"}, Underfull \hbox (badness 10000) in paragraph at lines 1087--1092 []\T1/pcr/b/n/10 NP_restrictions \T1/ptm/m/n/10 ^^U List of Node-Prop-erty key: value pairs Underfull \hbox (badness 10000) in paragraph at lines 1087--1092 \T1/ptm/m/n/10 that nodes must have to re-ceive the di-ag-nos-tic in-ter-ven-ti on. Underfull \hbox (badness 10000) in paragraph at lines 1087--1092 \T1/ptm/m/n/10 For ex-am-ple, \T1/pcr/m/n/10 [{"NodeProperty1":"PropertyValue1" }, Underfull \hbox (badness 10000) in paragraph at lines 1094--1098 []\T1/pcr/b/n/10 disqualifying_properties \T1/ptm/m/n/10 ^^U List of In-di-vid- u-al-Prop-erty Underfull \hbox (badness 10000) in paragraph at lines 1094--1098 \T1/ptm/m/n/10 key:value pairs that cause an in-ter-ven-tion to be aborted. For ex- Underfull \hbox (badness 10000) in paragraph at lines 1094--1098 \T1/ptm/m/n/10 am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue1"} , Underfull \hbox (badness 10000) in paragraph at lines 1117--1120 []\T1/pcr/b/n/10 expire_recent_drugs \T1/ptm/m/n/10 ^^U Adds \T1/pcr/m/n/10 [{" DrugStatus:None"}] \T1/ptm/m/n/10 to \T1/ptm/b/n/10 Prop- [19] Underfull \hbox (badness 10000) in paragraph at lines 1206--1206 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1206--1206 \T1/ptm/m/it/10 drug_code: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cam- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 paign_type: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 MDA\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6775) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: Overfull \hbox (19.21352pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 7344) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag- Overfull \hbox (51.55446pt too wide) in paragraph at lines 1237--1237 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 = 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 fmda_radius: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (6.22408pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 5667) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 balls: [][]int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 treat-ment_delay: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Overfull \hbox (17.97432pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 tar-get_group: Overfull \hbox (33.88365pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (33.19351pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (26.53346pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ing_properties: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ent_drug_configs: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 get_residents_only: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (35.68343pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 False\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Overfull \hbox (144.47322pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ing_drugs_event_name=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Received _Campaign_Drugs\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) [20] [21] [22] Underfull \hbox (badness 10000) in paragraph at lines 1388--1391 []\T1/pcr/b/n/10 ind_property_restrictions \T1/ptm/m/n/10 ^^U The set-ting for \T1/ptm/b/n/10 Prop- Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (57.71327pt too wide) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e-ti-tions: [][]int[ ][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 6348) in paragraph at lines 1433--1433 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][] list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (86.50304pt too wide) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 6032) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 ing_properties: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 trig-ger_condition_list: [][]list[][] = [23] Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 7504) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 treat-ment_delay: [][]int[ ][] Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure-ment_sensitivity: Underfull \hbox (badness 6063) in paragraph at lines 1448--1448 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [ ][]list[][] Overfull \hbox (92.50304pt too wide) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1449--1452 \T1/ptm/m/n/10 Add an MSAT (mass screen-ing and treat-ment) drug in-ter-ven-tio n to your cam-paign. See [24] Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 7221) in paragraph at lines 1463--1463 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [ ][]float[][] Underfull \hbox (badness 7595) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (92.50304pt too wide) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 7869) in paragraph at lines 1464--1467 \T1/ptm/m/n/10 Add an fMDA (fo-cal mass drug ad-min-is-tra-tion) drug in-ter-ve n-tion to your cam-paign. See Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 6141) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (75.71327pt too wide) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Overfull \hbox (9.55446pt too wide) in paragraph at lines 1478--1478 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (104.50304pt too wide) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- [25] Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (69.71327pt too wide) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 7613) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_covera ge: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS-TANCE_ONLY\ TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 node_ids: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (98.50304pt too wide) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1508--1508 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ev ent_trigger: [26] Underfull \hbox (badness 5091) in paragraph at lines 1571--1571 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][]l ist[][] = None\T1/ptm/m/n/10 , [27] Underfull \hbox (badness 10000) in paragraph at lines 1608--1608 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1608--1608 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 5274) in paragraph at lines 1644--1644 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Underfull \hbox (badness 10000) in paragraph at lines 1644--1644 \T1/ptm/m/it/10 killing_eff=1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- Underfull \hbox (badness 10000) in paragraph at lines 1644--1644 \T1/ptm/m/it/10 sec-ti-cide=None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1665--1665 []\T1/ptm/m/it/10 schema_path_container\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1665--1665 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 1665--1665 \T1/ptm/m/it/10 killing_exponential_decay_rate: [28] Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 re-leased_number: Underfull \hbox (badness 5954) in paragraph at lines 1708--1708 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 leased_fraction: Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 leased_infectious: Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 leased_species: Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 re-leased_genome: Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1728--1730 []\T1/pcr/b/n/10 released_infectious \T1/ptm/m/n/10 ^^U The frac-tion of vec-to rs re-leased that Underfull \hbox (badness 10000) in paragraph at lines 1728--1730 \T1/ptm/m/n/10 are to be in-fec-tious. One can only use this fea-ture when Overfull \hbox (16.27205pt too wide) in paragraph at lines 1728--1730 \T1/ptm/m/n/10 `Malaria_Model'!='MALARIA_MECHANISTIC_MODEL_WITH_PARASITE_GENETI CS' Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (16.35448pt too wide) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 file- Overfull \hbox (2.35487pt too wide) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [29] Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Overfull \hbox (2.73457pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (14.36418pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (52.97314pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (32.53346pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (39.19351pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 5359) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ig- Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 bool[][] = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (16.02399pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 tion_period_override: [30] Underfull \hbox (badness 5893) in paragraph at lines 1804--1806 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Overfull \hbox (5.18481pt too wide) in paragraph at lines 1859--1859 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 de-mo- Overfull \hbox (38.73457pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 float[][] = Overfull \hbox (50.36418pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (2.6847pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 tions: Overfull \hbox (88.97314pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , Overfull \hbox (68.53346pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (75.19351pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 tar- Overfull \hbox (17.93463pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Overfull \hbox (19.59468pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (11.3646pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 str[][] = Overfull \hbox (26.75435pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (52.02399pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5077) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = - Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cre- Overfull \hbox (90.54375pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 ate_nucleotide_sequence_from: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BAR- Overfull \hbox (33.99452pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 CODE_STRING\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 bar- Overfull \hbox (13.79442pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 code_string: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (52.88371pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 drug_resistant_string: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (43.23422pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 msp_variant_value: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (64.34395pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 pfemp1_variants_values: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 bar- Overfull \hbox (155.51305pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 code_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (194.60234pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 drug_resistant_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = [31] Overfull \vbox (135.66997pt too high) has occurred while \output is active [32] Underfull \hbox (badness 5893) in paragraph at lines 1886--1888 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [33] Overfull \hbox (11.18481pt too wide) in paragraph at lines 1975--1975 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 de-mo- Overfull \hbox (44.73457pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 float[][] Underfull \hbox (badness 8151) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tar- Overfull \hbox (56.36418pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tions: Overfull \hbox (94.97314pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.19351pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tar- Overfull \hbox (23.93463pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (25.59468pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tar- Overfull \hbox (17.3646pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 ig- Overfull \hbox (32.75435pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (58.02399pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Overfull \hbox (10.34447pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 irbc_type: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 mi- Overfull \hbox (42.5643pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 nor_epitope_type: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (10.3446pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 msp_type: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = [34] Overfull \vbox (3.66997pt too high) has occurred while \output is active [35] Underfull \hbox (badness 5893) in paragraph at lines 2002--2004 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e- Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (22.97314pt too wide) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (2.53346pt too wide) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (9.19351pt too wide) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 get_age_min: [][]int[][] = [36] Underfull \hbox (badness 5893) in paragraph at lines 2086--2088 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [37] Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 \T1/ptm/m/it/10 cide_name: Overfull \hbox (29.51352pt too wide) in paragraph at lines 2127--2127 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (32.87419pt too wide) in paragraph at lines 2127--2127 \T1/ptm/m/it/10 killing_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (74.87367pt too wide) in paragraph at lines 2127--2127 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2169--2169 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spray_coverage: [38] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2194--2194 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2194--2194 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2194--2194 \T1/ptm/m/it/10 file- Underfull \hbox (badness 10000) in paragraph at lines 2194--2194 \T1/ptm/m/it/10 name: Underfull \hbox (badness 10000) in paragraph at lines 2194--2194 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 6893) in paragraph at lines 2211--2211 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[] [] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2255--2255 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , [39] Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 tar-gets: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 drug: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.88365pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 6204) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du- Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 ra-tion: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 broad- Overfull \hbox (41.29442pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 cast_event_name: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Overfull \hbox (18.86435pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 ceivedTreat- Underfull \hbox (badness 10000) in paragraph at lines 2291--2295 []\T1/pcr/b/n/10 of individuals to target with the intervention. Default is Underfull \hbox (badness 10000) in paragraph at lines 2291--2295 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 properties\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 [ { "trigger":"NewClinicalCase","coverage":0. Underfull \hbox (badness 10000) in paragraph at lines 2291--2295 \T1/pcr/m/n/10 8,"agemin":15,"agemax":70, "seek":0.4,"rate":0.3}, Underfull \hbox (badness 10000) in paragraph at lines 2291--2295 \T1/pcr/m/n/10 {"trigger":"NewSevereCase","coverage":0.8,"seek":0.6, Underfull \hbox (badness 10000) in paragraph at lines 2309--2310 []\T1/pcr/b/n/10 must have to receive the intervention. For example, Underfull \hbox (badness 10000) in paragraph at lines 2309--2310 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 individuals\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 ["IndividualProperty1:PropertyValue1", [40] Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis- Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 \T1/ptm/m/it/10 0.0013698630136986301\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_e ff: Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 \T1/ptm/m/it/10 0.0006849315068493151\T1/ptm/m/n/10 , \T1/ptm/m/it/10 iv_name: Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Us-ageDe-pen-de ntBed-net\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 \T1/ptm/m/it/10 sonal_dependence: [][]dict[][] = None\T1/ptm/m/n/10 , [41] [42] Underfull \hbox (badness 10000) in paragraph at lines 2538--2538 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2538--2538 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [43] Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 clude_vector_state: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 strat- Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 ify_by: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 GENOME\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 com- Overfull \hbox (9.02399pt too wide) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 bine_similar_genomes: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spe- Overfull \hbox (102.76315pt too wide) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 cific_genome_combinations_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Overfull \hbox (64.54318pt too wide) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 lele_combinations_for_stratification: Overfull \hbox (2.32376pt too wide) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 les_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [44] Underfull \hbox (badness 10000) in paragraph at lines 2633--2633 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 6893) in paragraph at lines 2652--2652 \T1/ptm/m/it/10 = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 \T1/ptm/m/it/10 ual_property_filter: Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 in-fec- Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 \T1/ptm/m/it/10 tious-ness_bins: Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (4.30418pt too wide) in paragraph at lines 2652--2652 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 7291) in paragraph at lines 2652--2652 [][]\T1/ptm/m/it/10 int[][] = 100\T1/ptm/m/n/10 , \T1/ptm/m/it/10 par-a- Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [45] Underfull \hbox (badness 10000) in paragraph at lines 2713--2713 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i- Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 nodes: Overfull \hbox (3.20416pt too wide) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 pretty_format: Overfull \hbox (15.2441pt too wide) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 port_description: [46] Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 start_day: Overfull \hbox (6.45485pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 re-port- Overfull \hbox (21.46431pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 re- Overfull \hbox (28.1245pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 port_filename: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Spa- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 tial-Re- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 port- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 Malar- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 i-aFil- Overfull \hbox (13.23434pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 spa- Overfull \hbox (56.87419pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 tial_output_channels: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 list[][] = [47] Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 ^^PBlood_Smear_Gametocyte_Prevalence^^Q, ^^PBlood_Smear_Parasite _Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 ^^PCam-paign_Cost^^Q, ^^PDaily_Bites_Per_Human^^Q, ^^PDaily_EIR^ ^Q, ^^PDis-ease_Deaths^^Q, Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 ^^PNew_Reported_Infections^^Q, ^^PNew_Severe_Cases^^Q, ^^PPCR_Ga metocyte_Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 ^^PPCR_Parasite_Prevalence^^Q, ^^PPfHRP2_Prevalence^^Q, ^^PPop-u -la-tion^^Q, ^^PPreva- Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 lence^^Q, ^^PRain-fall^^Q, ^^PRel-a-tive_Humidity^^Q, ^^PTrue_Pr evalence^^Q De-faults: Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 6893) in paragraph at lines 2818--2818 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 2839--2839 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 2839--2839 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- Underfull \hbox (badness 10000) in paragraph at lines 2839--2839 \T1/ptm/m/it/10 clude_infection_table: Underfull \hbox (badness 10000) in paragraph at lines 2839--2839 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- [48] Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 re-port-ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Overfull \hbox (10.30418pt too wide) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 port_description: [49] Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (10.30418pt too wide) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (20.78384pt too wide) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 port_description: [50] Underfull \hbox (badness 10000) in paragraph at lines 3052--3052 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3052--3052 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (26.78384pt too wide) in paragraph at lines 3052--3052 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 6526) in paragraph at lines 3052--3052 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3052--3052 \T1/ptm/m/it/10 ify_by_gender: Overfull \hbox (47.85474pt too wide) in paragraph at lines 3086--3086 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (49.79494pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 man- Overfull \hbox (35.35486pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 i- Overfull \hbox (45.63463pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (46.26491pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 bar- Overfull \hbox (55.34474pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 codes: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (122.7736pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 drug_resistant_strings: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (148.3231pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 drug_resistant_statistic_type: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (240.52356pt too wide) in paragraph at lines 3086--3086 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 NUM_PEOPLE_WITH_RESISTANT_INFECTION\TS1/ptm/m /it/10 '\T1/ptm/m/n/10 , Overfull \hbox (68.48471pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 age_bins: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (40.35486pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 in- Overfull \hbox (40.35486pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 di- Overfull \hbox (44.7948pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 vid- Overfull \hbox (128.78384pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 ual_property_to_collect: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (36.0248pt too wide) in paragraph at lines 3086--3086 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Overfull \hbox (50.76463pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 strat- Overfull \hbox (89.68442pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 ify_by_gender: Overfull \hbox (39.8048pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (40.24501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 1\T1/pcr/m/n/10 ) [51] [52] Underfull \hbox (badness 10000) in paragraph at lines 3137--3137 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Overfull \hbox (17.85474pt too wide) in paragraph at lines 3166--3166 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (19.79494pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 man- Overfull \hbox (5.35486pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 i- Overfull \hbox (15.63463pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (48.68404pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 species_list: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (22.85487pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (20.76463pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 strat- Overfull \hbox (60.89413pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 ify_by_species: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 in- Overfull \hbox (70.75449pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 clude_wolbachia: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 in- Overfull \hbox (65.80426pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 clude_gestation: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (16.26491pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 bar- Overfull \hbox (25.34474pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 codes: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (26.35487pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [53] Underfull \hbox (badness 10000) in paragraph at lines 3206--3206 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3206--3206 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 3206--3206 \T1/ptm/m/it/10 En-abled: bool = Underfull \hbox (badness 10000) in paragraph at lines 3254--3254 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3254--3254 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 3254--3254 \T1/ptm/m/it/10 En-abled: bool = [54] Underfull \hbox (badness 10000) in paragraph at lines 3278--3278 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3278--3278 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3278--3278 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 3278--3278 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (55.2345pt too wide) in paragraph at lines 3303--3303 []\T1/ptm/m/it/10 class_name: Overfull \hbox (15.80469pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 str Overfull \hbox (11.99501pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 = Overfull \hbox (28.85487pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (18.57497pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 pa- Overfull \hbox (24.53493pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 ram- Overfull \hbox (13.01491pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 e- Overfull \hbox (23.4746pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 ters: Overfull \hbox (20.24474pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 dict Overfull \hbox (11.99501pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 = Overfull \hbox (27.5448pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (19.68495pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 En- Overfull \hbox (30.7948pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 abled: Overfull \hbox (23.0249pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 = Overfull \hbox (26.08485pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (66.5943pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (23.0249pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 = Overfull \hbox (29.58485pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 5832) in paragraph at lines 3306--3311 \T1/ptm/m/n/10 The re-port can only be used when the sim-u-la-tion setup pa-ram -e-ter \T1/ptm/b/n/10 Malaria_Model \T1/ptm/m/n/10 is set to Overfull \hbox (13.2345pt too wide) in paragraph at lines 3328--3328 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 bool = [55] Underfull \hbox (badness 10000) in paragraph at lines 3353--3353 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 3353--3353 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 6236) in paragraph at lines 3401--3401 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 3401--3401 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3401--3401 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , [56] Underfull \hbox (badness 10000) in paragraph at lines 3425--3425 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 3425--3425 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 3425--3425 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 3425--3425 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 3425--3425 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 3454--3454 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3454--3454 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 3454--3454 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3454--3454 \T1/ptm/m/it/10 En-abled: Overfull \hbox (6.5943pt too wide) in paragraph at lines 3454--3454 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 3498--3498 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 bool = [57] Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 str = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 bool = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (67.2345pt too wide) in paragraph at lines 3545--3545 []\T1/ptm/m/it/10 class_name: Overfull \hbox (27.80469pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 str Overfull \hbox (23.99501pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 = Overfull \hbox (40.85487pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (30.57497pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 pa- Overfull \hbox (36.53493pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 ram- Overfull \hbox (25.01491pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 e- Overfull \hbox (35.4746pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 ters: Overfull \hbox (32.24474pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 dict Overfull \hbox (23.99501pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 = Overfull \hbox (39.5448pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (31.68495pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 En- Overfull \hbox (42.7948pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 abled: Overfull \hbox (35.0249pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 = Overfull \hbox (38.08485pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (78.5943pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (35.0249pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 = Overfull \hbox (41.58485pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) [58] Underfull \hbox (badness 10000) in paragraph at lines 3573--3573 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 3573--3573 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 3573--3573 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 3573--3573 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 3573--3573 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (37.2345pt too wide) in paragraph at lines 3597--3597 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 str Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 = Overfull \hbox (10.85487pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (0.57497pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 pa- Overfull \hbox (6.53493pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 ram- Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 e- Overfull \hbox (5.4746pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 ters: Overfull \hbox (2.24474pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 dict Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 = Overfull \hbox (9.5448pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (1.68495pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 En- Overfull \hbox (12.7948pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 abled: Overfull \hbox (5.0249pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 = Overfull \hbox (8.08485pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (48.5943pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (5.0249pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 = Overfull \hbox (11.58485pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) [59] Underfull \hbox (badness 10000) in paragraph at lines 3650--3650 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , Overfull \hbox (24.52415pt too wide) in paragraph at lines 3650--3650 \T1/ptm/m/it/10 var_gene_randomness_type: Underfull \hbox (badness 10000) in paragraph at lines 3650--3650 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 3651--3653 \T1/ptm/m/n/10 Sets up the de-fault pa-ram-e-ters for par-a-site ge-net-ics sim -u-la-tions Malaria_Model = [60] [61] [62] [63] Underfull \hbox (badness 10000) in paragraph at lines 4033--4033 []\T1/ptm/m/it/10 config\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/ 10 , \T1/ptm/m/it/10 in-sec- Underfull \hbox (badness 6675) in paragraph at lines 4033--4033 \T1/ptm/m/it/10 ti-cide_name: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 5939) in paragraph at lines 4033--4033 \T1/ptm/m/it/10 species: [][]str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 al- Underfull \hbox (badness 6047) in paragraph at lines 4033--4033 \T1/ptm/m/it/10 block-ing: [][]float[][] = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4033--4033 \T1/ptm/m/it/10 pelling: [][]float[][] = 1.0\T1/ptm/m/n/10 , [64] [65] [66] Overfull \hbox (54.6225pt too wide) in paragraph at lines 4203--4204 []\T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 , Overfull \hbox (84.6225pt too wide) in paragraph at lines 4207--4208 []\T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/m/ n/10 , Overfull \hbox (12.6225pt too wide) in paragraph at lines 4208--4209 []\T1/pcr/m/n/10 emodpy_malaria.interventions.diag_survey\T1/ptm/m/n/10 , Overfull \hbox (24.6225pt too wide) in paragraph at lines 4210--4211 []\T1/pcr/m/n/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4211--4212 []\T1/pcr/m/n/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 , Overfull \hbox (6.6225pt too wide) in paragraph at lines 4213--4214 []\T1/pcr/m/n/10 emodpy_malaria.interventions.ivermectin\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 4214--4215 []\T1/pcr/m/n/10 emodpy_malaria.interventions.mosquitorelease\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4215--4216 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 , Overfull \hbox (36.6225pt too wide) in paragraph at lines 4216--4217 []\T1/pcr/m/n/10 emodpy_malaria.interventions.outdoorrestkill\T1/ptm/m/n/10 , Overfull \hbox (24.6225pt too wide) in paragraph at lines 4217--4218 []\T1/pcr/m/n/10 emodpy_malaria.interventions.spacespraying\T1/ptm/m/n/10 , Overfull \hbox (0.6225pt too wide) in paragraph at lines 4218--4219 []\T1/pcr/m/n/10 emodpy_malaria.interventions.sugartrap\T1/ptm/m/n/10 , Overfull \hbox (48.6225pt too wide) in paragraph at lines 4219--4220 []\T1/pcr/m/n/10 emodpy_malaria.interventions.treatment_seeking\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4220--4221 []\T1/pcr/m/n/10 emodpy_malaria.interventions.udbednet\T1/ptm/m/n/10 , [67] (./institute-for-disease-modeling-emodpy-malaria.ind [68] Underfull \hbox (badness 10000) in paragraph at lines 8--10 []\T1/pcr/m/n/10 add_alleles() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 10--12 []\T1/pcr/m/n/10 add_campaign_event() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 10--12 \T1/ptm/m/it/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Overfull \hbox (48.28003pt too wide) in paragraph at lines 12--14 \T1/ptm/m/it/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/m/n /10 ), Underfull \hbox (badness 10000) in paragraph at lines 14--16 []\T1/pcr/m/n/10 add_diagnostic_survey() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod -ule Underfull \hbox (badness 10000) in paragraph at lines 14--16 \T1/ptm/m/it/10 emodpy_malaria.interventions.diag_survey\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 16--18 []\T1/pcr/m/n/10 add_drug_campaign() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 16--18 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 18--20 []\T1/pcr/m/n/10 add_drug_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 20--22 []\T1/pcr/m/n/10 add_drug_status_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/pcr/m/n/10 add_fMDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 22--24 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 26--28 []\T1/pcr/m/n/10 add_insecticide_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 28--30 []\T1/pcr/m/n/10 add_insecticide_resistance() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 32--34 []\T1/pcr/m/n/10 add_malaria_patient_json_report() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 34--36 []\T1/pcr/m/n/10 add_malaria_sql_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Underfull \hbox (badness 10000) in paragraph at lines 36--38 []\T1/pcr/m/n/10 add_malaria_summary_report() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 40--42 []\T1/pcr/m/n/10 add_malaria_transmission_report() \T1/ptm/m/n/10 (\T1/ptm/m/it /10 in Underfull \hbox (badness 10000) in paragraph at lines 42--44 []\T1/pcr/m/n/10 add_MDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 42--44 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 44--46 []\T1/pcr/m/n/10 add_MSAT() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 44--46 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 46--48 []\T1/pcr/m/n/10 add_mutation() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 48--50 []\T1/pcr/m/n/10 add_outbreak_individual() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in m od-ule Underfull \hbox (badness 10000) in paragraph at lines 48--50 \T1/ptm/m/it/10 emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 50--52 \T1/ptm/m/it/10 ule emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 52--54 \T1/ptm/m/it/10 ule emodpy_malaria.interventions.outbreak\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 54--56 []\T1/pcr/m/n/10 add_OutdoorRestKill() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 56--58 []\T1/pcr/m/n/10 add_report_event_counter() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (52.1225pt too wide) in paragraph at lines 60--62 []\T1/pcr/m/n/10 add_report_node_demographics_malaria_genetics() Underfull \hbox (badness 10000) in paragraph at lines 62--64 []\T1/pcr/m/n/10 add_report_vector_genetics() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 i n mod-ule Underfull \hbox (badness 10000) in paragraph at lines 66--68 []\T1/pcr/m/n/10 add_report_vector_stats() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in m od-ule Overfull \hbox (22.1225pt too wide) in paragraph at lines 68--70 []\T1/pcr/m/n/10 add_report_vector_stats_malaria_genetics() Underfull \hbox (badness 10000) in paragraph at lines 70--72 []\T1/pcr/m/n/10 add_rfMDA() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 70--72 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 72--74 []\T1/pcr/m/n/10 add_rfMSAT() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 72--74 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 74--76 []\T1/pcr/m/n/10 add_spatial_report_malaria_filtered() [69] Underfull \hbox (badness 10000) in paragraph at lines 76--78 []\T1/pcr/m/n/10 add_species() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/pcr/m/n/10 add_species() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 80--82 []\T1/pcr/m/n/10 add_species_drivers() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-u le Underfull \hbox (badness 10000) in paragraph at lines 82--83 []\T1/pcr/m/n/10 add_trait() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 83--85 []\T1/pcr/m/n/10 add_treatment_seeking() 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(\T1/ptm/m/it/10 in mod-ule Overfull \hbox (59.0599pt too wide) in paragraph at lines 101--103 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaImmunityReport Overfull \hbox (72.70978pt too wide) in paragraph at lines 103--105 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaPatientJSONReport Overfull \hbox (34.07018pt too wide) in paragraph at lines 105--107 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSqlReport Overfull \hbox (59.06006pt too wide) in paragraph at lines 107--109 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSummaryReport Overfull \hbox (79.58981pt too wide) in paragraph at lines 109--111 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.MalariaSurveyJSONAnalyzer Overfull \hbox (34.07019pt too wide) in paragraph at lines 111--113 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportDrugStatus Overfull \hbox (44.06006pt too wide) in paragraph at lines 113--115 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportEventCounter Overfull \hbox (93.57004pt too wide) in paragraph at lines 115--117 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportHumanMigrationTracking Overfull \hbox (68.25012pt too wide) in paragraph at lines 117--119 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographics Overfull \hbox (136.01923pt too wide) in paragraph at lines 119--121 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographicsMalariaGenetics Overfull \hbox (125.03925pt too wide) in paragraph at lines 121--123 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 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Overfull \hbox (44.61995pt too wide) in paragraph at lines 133--135 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.VectorHabitatReport Underfull \hbox (badness 10000) in paragraph at lines 138--140 []\T1/pcr/m/n/10 drug_configs_from_code() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Overfull \hbox (4.27083pt too wide) in paragraph at lines 138--140 \T1/ptm/m/it/10 emodpy_malaria.interventions.drug_campaign\T1/ptm/m/n/10 ), Overfull \hbox (52.1225pt too wide) in paragraph at lines 147--148 []\T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics Overfull \hbox (82.1225pt too wide) in paragraph at lines 155--156 []\T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker Overfull \hbox (10.1225pt too wide) in paragraph at lines 157--158 []\T1/pcr/m/n/10 emodpy_malaria.interventions.diag_survey Overfull \hbox (22.1225pt too wide) in paragraph at lines 161--162 []\T1/pcr/m/n/10 emodpy_malaria.interventions.drug_campaign 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from_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (36.54083pt too wide) in paragraph at lines 196--198 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 198--200 []\T1/pcr/m/n/10 from_pop_csv() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (36.54083pt too wide) in paragraph at lines 198--200 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 200--202 []\T1/pcr/m/n/10 from_template_node() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Overfull \hbox (36.54083pt too wide) in paragraph at lines 200--202 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 205--207 []\T1/pcr/m/n/10 get_drug_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 207--209 []\T1/pcr/m/n/10 get_file_from_http() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 209--211 []\T1/pcr/m/n/10 get_species_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 211--213 []\T1/pcr/m/n/10 get_species_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ul e Underfull \hbox (badness 10000) in paragraph at lines 216--218 []\T1/pcr/m/n/10 InputEIR() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 216--218 \T1/ptm/m/it/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 218--220 []\T1/pcr/m/n/10 IRSHousingModification() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mo d-ule Underfull \hbox (badness 10000) in paragraph at lines 220--222 []\T1/pcr/m/n/10 Ivermectin() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 220--222 \T1/ptm/m/it/10 emodpy_malaria.interventions.ivermectin\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 225--227 []\T1/pcr/m/n/10 MalariaDemographics \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Overfull \hbox (36.54083pt too wide) in paragraph at lines 225--227 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 227--229 []\T1/pcr/m/n/10 MalariaDiagnostic() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 227--229 \T1/ptm/m/it/10 emodpy_malaria.interventions.common\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 229--231 []\T1/pcr/m/n/10 MalariaImmunityReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 231--233 []\T1/pcr/m/n/10 MalariaPatientJSONReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 233--235 []\T1/pcr/m/n/10 MalariaSqlReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 235--237 []\T1/pcr/m/n/10 MalariaSummaryReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 237--239 []\T1/pcr/m/n/10 MalariaSurveyJSONAnalyzer \T1/ptm/m/n/10 (\T1/ptm/m/it/10 clas s in Overfull \hbox (74.6225pt too wide) in paragraph at lines 242--243 []| \T1/pcr/m/n/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/1 0 , Overfull \hbox (2.6225pt too wide) in paragraph at lines 244--245 []| \T1/pcr/m/n/10 emodpy_malaria.interventions.bednet\T1/ptm/m/n/10 , Overfull \hbox (2.6225pt too wide) in paragraph at lines 245--246 []| \T1/pcr/m/n/10 emodpy_malaria.interventions.common\T1/ptm/m/n/10 , Overfull \hbox (104.6225pt too wide) in paragraph at lines 246--247 []| \T1/pcr/m/n/10 emodpy_malaria.interventions.community_health_worker\T1/ptm/ m/n/10 , Overfull \hbox (32.6225pt too wide) in paragraph at 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lines 269--271 []\T1/pcr/m/n/10 new_intervention() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 269--271 \T1/ptm/m/it/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 ), [71] Underfull \hbox (badness 10000) in paragraph at lines 271--273 []\T1/pcr/m/n/10 new_intervention_as_file() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 273--275 []\T1/pcr/m/n/10 new_intervention_as_file() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 275--277 []\T1/pcr/m/n/10 new_intervention_as_file() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 277--279 []\T1/pcr/m/n/10 new_intervention_as_file() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 279--281 []\T1/pcr/m/n/10 new_intervention_as_file() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox 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pop_filename_out=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 spatial_grid ded_pop_dir\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 608--608 []\T1/ptm/m/it/10 tot_pop=1000000.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 608--608 \T1/ptm/m/it/10 num_nodes=100\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 608--608 \T1/ptm/m/it/10 frac_rural=0.3\T1/ptm/m/n/10 , Overfull \hbox (9.35394pt too wide) in paragraph at lines 608--608 \T1/ptm/m/it/10 id_ref=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 from_params\TS1/ptm/m/ it/10 '\T1/pcr/m/n/10 ) [10] Underfull \hbox (badness 10000) in paragraph at lines 652--652 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 block-ing_pre decay_duration: Underfull \hbox (badness 10000) in paragraph at lines 652--652 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_decay _rate: [][]float[][] Underfull \hbox (badness 10000) in paragraph at lines 652--652 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_predecay_duration: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 652--652 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-pelling_decay_rate: [] []float[][] = Underfull \hbox (badness 10000) in paragraph at lines 652--652 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-pelling_predecay_duration: [][]int[][] = Underfull \hbox (badness 5091) in paragraph at lines 652--652 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us-age_decay_rate: [][]floa t[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 us- [11] Underfull \hbox (badness 10000) in paragraph at lines 729--729 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age=1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 729--729 \T1/ptm/m/it/10 block-ing_eff=1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_eff=1\T 1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 772--772 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , [12] Underfull \hbox (badness 10000) in paragraph at lines 803--803 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 Mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 803--803 \T1/ptm/m/it/10 ment_Sensitivity\T1/ptm/m/n/10 , \T1/ptm/m/it/10 De-tec- Underfull \hbox (badness 10000) in paragraph at lines 803--803 \T1/ptm/m/it/10 tion_Threshold\T1/ptm/m/n/10 , \T1/ptm/m/it/10 Di-ag-nos- Overfull \hbox (83.18481pt too wide) in paragraph at lines 870--870 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (82.35448pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 start_day: Overfull \hbox (51.8048pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , Overfull \hbox (59.02464pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 trig- Overfull \hbox (117.814pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 ger_condition_list: Overfull \hbox (53.47458pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (54.01491pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 de- Overfull \hbox (56.79494pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 mo- Overfull \hbox (116.73457pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (59.0249pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (56.24501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , Overfull \hbox (80.6847pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 node_ids: Overfull \hbox (53.47458pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (146.53346pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 ind_property_restrictions: Overfull \hbox (53.47458pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (153.19351pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 node_property_restrictions: Overfull \hbox (53.47458pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 tar- Overfull \hbox (95.93463pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 get_age_min: Overfull \hbox (51.8048pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 tar- Overfull \hbox (97.59468pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 get_age_max: Overfull \hbox (51.8048pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (58.74501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Overfull \hbox (56.0448pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 tar- Overfull \hbox (89.3646pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 get_gender: Overfull \hbox (51.80469pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (59.69456pt too wide) in paragraph at lines 870--870 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Overfull \hbox (55.13475pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 ini- Overfull \hbox (92.9145pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 tial_amount: Overfull \hbox (51.8048pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (48.74501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 6\T1/ptm/m/n/10 , Overfull \hbox (128.46431pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 amount_in_shipment: Overfull \hbox (51.8048pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (145.67392pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 days_between_shipments: Overfull \hbox (59.0249pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (54.57497pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 du- Overfull \hbox (53.31496pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 ra- Overfull \hbox (60.13475pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 tion: Overfull \hbox (59.0249pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 float[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (97.43495pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 3.40282e+38\T1/ptm/m/n/10 , Overfull \hbox (52.35486pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 in- Overfull \hbox (55.48474pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 ter- Overfull \hbox (58.45485pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 ven- Overfull \hbox (89.57469pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 tion_config: Overfull \hbox (55.68495pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 any Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (64.85487pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (147.144pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 max_distributed_per_day: Overfull \hbox (51.8048pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (86.5846pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 max_stock: Overfull \hbox (51.8048pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (93.74501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 2147480000\T1/ptm/m/n/10 , Overfull \hbox (61.80467pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 wait- Overfull \hbox (88.46458pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 ing_period: Overfull \hbox (51.8048pt too wide) in paragraph at lines 870--870 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (47.99501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 = Overfull \hbox (52.24501pt too wide) in paragraph at lines 870--870 \T1/ptm/m/it/10 0\T1/pcr/m/n/10 ) [13] [14] Overfull \vbox (355.66753pt too high) has occurred while \output is active [15] [16] Overfull \hbox (31.21352pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 get: [][]ob-ject[][] Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 959--959 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 5203) in paragraph at lines 959--959 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag-nos- Overfull \hbox (63.55446pt too wide) in paragraph at lines 959--959 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 tic_threshold: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 float[][] = 40\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 mea-sure- Overfull \hbox (1.01384pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 event_name: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Di-ag- Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 nos-tic Sur-vey\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6364) in paragraph at lines 959--959 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (27.58405pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 tive_diagnosis_configs: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 neg-a- Overfull \hbox (27.58405pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 tive_diagnosis_configs: Overfull \hbox (6.95406pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 ceived_test_event: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 ceived_Test\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 IP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 NP_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 ing_properties: Overfull \hbox (9.814pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 lis-ten- Underfull \hbox (badness 10000) in paragraph at lines 959--959 \T1/ptm/m/it/10 ing_duration: Overfull \hbox (29.97432pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 959--959 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (47.68343pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 check_eligibility_at_trigger: Overfull \hbox (9.71407pt too wide) in paragraph at lines 959--959 \T1/ptm/m/it/10 pire_recent_drugs: [17] Underfull \hbox (badness 10000) in paragraph at lines 992--995 []\T1/pcr/b/n/10 diagnostic_type \T1/ptm/m/n/10 ^^U Type of malaria di-ag-nos-t ic used. De-fault is Underfull \hbox (badness 10000) in paragraph at lines 1034--1037 []\T1/ptm/m/n/10 In ga-me-to-cytes/microliter, use mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1057--1059 []\T1/pcr/b/n/10 measurement_sensitivity \T1/ptm/m/n/10 ^^U Set-ting for \T1/pt m/b/n/10 Mea-sure-ment_Sensitivity \T1/ptm/m/n/10 in [18] Underfull \hbox (badness 10000) in paragraph at lines 1080--1085 []\T1/pcr/b/n/10 IP_restrictions \T1/ptm/m/n/10 ^^U List of In-di-vid-u-al-Prop -erty key:value pairs that Underfull \hbox (badness 10000) in paragraph at lines 1080--1085 \T1/ptm/m/n/10 in-di-vid-u-als must have to re-ceive the di-ag-nos-tic in-ter-v en-tion. For Underfull \hbox (badness 10000) in paragraph at lines 1080--1085 \T1/ptm/m/n/10 ex-am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue 1"}, Underfull \hbox (badness 10000) in paragraph at lines 1087--1092 []\T1/pcr/b/n/10 NP_restrictions \T1/ptm/m/n/10 ^^U List of Node-Prop-erty key: value pairs Underfull \hbox (badness 10000) in paragraph at lines 1087--1092 \T1/ptm/m/n/10 that nodes must have to re-ceive the di-ag-nos-tic in-ter-ven-ti on. Underfull \hbox (badness 10000) in paragraph at lines 1087--1092 \T1/ptm/m/n/10 For ex-am-ple, \T1/pcr/m/n/10 [{"NodeProperty1":"PropertyValue1" }, Underfull \hbox (badness 10000) in paragraph at lines 1094--1098 []\T1/pcr/b/n/10 disqualifying_properties \T1/ptm/m/n/10 ^^U List of In-di-vid- u-al-Prop-erty Underfull \hbox (badness 10000) in paragraph at lines 1094--1098 \T1/ptm/m/n/10 key:value pairs that cause an in-ter-ven-tion to be aborted. For ex- Underfull \hbox (badness 10000) in paragraph at lines 1094--1098 \T1/ptm/m/n/10 am-ple, \T1/pcr/m/n/10 [{"IndividualProperty1":"PropertyValue1"} , Underfull \hbox (badness 10000) in paragraph at lines 1117--1120 []\T1/pcr/b/n/10 expire_recent_drugs \T1/ptm/m/n/10 ^^U Adds \T1/pcr/m/n/10 [{" DrugStatus:None"}] \T1/ptm/m/n/10 to \T1/ptm/b/n/10 Prop- [19] Underfull \hbox (badness 10000) in paragraph at lines 1206--1206 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1206--1206 \T1/ptm/m/it/10 drug_code: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cam- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 paign_type: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 MDA\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 6775) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: Overfull \hbox (19.21352pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 7344) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 di-ag- Overfull \hbox (51.55446pt too wide) in paragraph at lines 1237--1237 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 di-ag-nos- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 = 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ment_sensitivity: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 fmda_radius: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (6.22408pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 5667) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 balls: [][]int[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 treat-ment_delay: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Overfull \hbox (17.97432pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 gered_campaign_delay: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 tar-get_group: Overfull \hbox (33.88365pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , Overfull \hbox (33.19351pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (26.53346pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 dis-qual-i-fy- Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ing_properties: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ger_condition_list: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ent_drug_configs: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 get_residents_only: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (35.68343pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 False\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv- Overfull \hbox (144.47322pt too wide) in paragraph at lines 1237--1237 \T1/ptm/m/it/10 ing_drugs_event_name=\TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Received _Campaign_Drugs\TS1/ptm/m/it/10 '\T1/pcr/m/n/10 ) [20] [21] [22] Underfull \hbox (badness 10000) in paragraph at lines 1388--1391 []\T1/pcr/b/n/10 ind_property_restrictions \T1/ptm/m/n/10 ^^U The set-ting for \T1/ptm/b/n/10 Prop- Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (57.71327pt too wide) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e-ti-tions: [][]int[ ][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tsteps_btwn_repetitions: Underfull \hbox (badness 6348) in paragraph at lines 1433--1433 [][]\T1/ptm/m/it/10 int[][] = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][] list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (86.50304pt too wide) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 6032) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 ing_properties: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1433--1433 \T1/ptm/m/it/10 trig-ger_condition_list: [][]list[][] = [23] Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 7504) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 = 60\T1/ptm/m/n/10 , \T1/ptm/m/it/10 treat-ment_delay: [][]int[ ][] Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 40\T1/ptm/m/n/10 , \T1/ptm/m/it/10 mea-sure-ment_sensitivity: Underfull \hbox (badness 6063) in paragraph at lines 1448--1448 [][]\T1/ptm/m/it/10 float[][] = 0.1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [ ][]list[][] Overfull \hbox (92.50304pt too wide) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 10000) in paragraph at lines 1448--1448 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 check_eligibility_at_trigger: Underfull \hbox (badness 10000) in paragraph at lines 1449--1452 \T1/ptm/m/n/10 Add an MSAT (mass screen-ing and treat-ment) drug in-ter-ven-tio n to your cam-paign. See [24] Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_days: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_coverage: Underfull \hbox (badness 7221) in paragraph at lines 1463--1463 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [ ][]float[][] Underfull \hbox (badness 7595) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 drug_configs: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (63.71327pt too wide) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 tsteps_btwn_repetitions: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (92.50304pt too wide) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar-get_gro up: Underfull \hbox (badness 10000) in paragraph at lines 1463--1463 \T1/ptm/m/it/10 any = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Ev-ery-one\TS1/ptm/m/it /10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig- Underfull \hbox (badness 7869) in paragraph at lines 1464--1467 \T1/ptm/m/n/10 Add an fMDA (fo-cal mass drug ad-min-is-tra-tion) drug in-ter-ve n-tion to your cam-paign. See Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 6141) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (75.71327pt too wide) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Overfull \hbox (9.55446pt too wide) in paragraph at lines 1478--1478 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BLOOD_SMEAR_PARASITES\TS1/ptm/m/it/10 '\T1/pt m/m/n/10 , Overfull \hbox (104.50304pt too wide) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1478--1478 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- [25] Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er-age: [][]float[][] = 1 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 re-ceiv-ing_drugs_event: Overfull \hbox (69.71327pt too wide) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 emod_api.interventions.common.BroadcastEvent Underfull \hbox (badness 7613) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 lis-ten-ing_duration: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 trig-ger_covera ge: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_selection_type: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 DIS-TANCE_ONLY\ TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 node_ids: [][]list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 ex-pire_recent_drugs: Overfull \hbox (98.50304pt too wide) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 emod_api.interventions.common.PropertyValueChanger Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1493--1493 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis-qual-i- fy- Underfull \hbox (badness 10000) in paragraph at lines 1508--1508 \T1/ptm/m/it/10 TANCE_ONLY\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ev ent_trigger: [26] Underfull \hbox (badness 5091) in paragraph at lines 1571--1571 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 node_ids: [][]l ist[][] = None\T1/ptm/m/n/10 , [27] Underfull \hbox (badness 10000) in paragraph at lines 1608--1608 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1608--1608 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 5274) in paragraph at lines 1644--1644 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cov-er- Underfull \hbox (badness 10000) in paragraph at lines 1644--1644 \T1/ptm/m/it/10 killing_eff=1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- Underfull \hbox (badness 10000) in paragraph at lines 1644--1644 \T1/ptm/m/it/10 sec-ti-cide=None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1665--1665 []\T1/ptm/m/it/10 schema_path_container\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1665--1665 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 1665--1665 \T1/ptm/m/it/10 killing_exponential_decay_rate: [28] Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 re-leased_number: Underfull \hbox (badness 5954) in paragraph at lines 1708--1708 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 leased_fraction: Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 leased_infectious: Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 leased_species: Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 \T1/ptm/m/it/10 re-leased_genome: Underfull \hbox (badness 10000) in paragraph at lines 1708--1708 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1728--1730 []\T1/pcr/b/n/10 released_infectious \T1/ptm/m/n/10 ^^U The frac-tion of vec-to rs re-leased that Underfull \hbox (badness 10000) in paragraph at lines 1728--1730 \T1/ptm/m/n/10 are to be in-fec-tious. One can only use this fea-ture when Overfull \hbox (16.27205pt too wide) in paragraph at lines 1728--1730 \T1/ptm/m/n/10 `Malaria_Model'!='MALARIA_MECHANISTIC_MODEL_WITH_PARASITE_GENETI CS' Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (16.35448pt too wide) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 file- Overfull \hbox (2.35487pt too wide) in paragraph at lines 1754--1754 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [29] Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 start_day: [][]int[][] Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Overfull \hbox (2.73457pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 graphic_coverage: Overfull \hbox (14.36418pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 int[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 node_ids: [][]list[][] Overfull \hbox (52.97314pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (32.53346pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (39.19351pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 5359) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/i t/10 '\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ig- Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 [][]\T1/ptm/m/it/10 bool[][] = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (16.02399pt too wide) in paragraph at lines 1780--1780 \T1/ptm/m/it/10 tion_period_override: [30] Underfull \hbox (badness 5893) in paragraph at lines 1804--1806 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Overfull \hbox (5.18481pt too wide) in paragraph at lines 1859--1859 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 de-mo- Overfull \hbox (38.73457pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 float[][] = Overfull \hbox (50.36418pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (2.6847pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 tions: Overfull \hbox (88.97314pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 = 365\T1/ptm/m/n/10 , Overfull \hbox (68.53346pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (75.19351pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 tar- Overfull \hbox (17.93463pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Overfull \hbox (19.59468pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (11.3646pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 str[][] = Overfull \hbox (26.75435pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 bool[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (52.02399pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 5077) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = - Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 cre- Overfull \hbox (90.54375pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 ate_nucleotide_sequence_from: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 BAR- Overfull \hbox (33.99452pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 CODE_STRING\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 bar- Overfull \hbox (13.79442pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 code_string: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (52.88371pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 drug_resistant_string: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (43.23422pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 msp_variant_value: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (64.34395pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 pfemp1_variants_values: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 bar- Overfull \hbox (155.51305pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 code_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (194.60234pt too wide) in paragraph at lines 1859--1859 \T1/ptm/m/it/10 drug_resistant_allele_frequencies_per_genome_location: Underfull \hbox (badness 10000) in paragraph at lines 1859--1859 [][]\T1/ptm/m/it/10 list[][] = [31] Overfull \vbox (135.66997pt too high) has occurred while \output is active [32] Underfull \hbox (badness 5893) in paragraph at lines 1886--1888 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [33] Overfull \hbox (11.18481pt too wide) in paragraph at lines 1975--1975 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 de-mo- Overfull \hbox (44.73457pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 float[][] Underfull \hbox (badness 8151) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 = 1.0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tar- Overfull \hbox (56.36418pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 rep-e-ti- Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tions: Overfull \hbox (94.97314pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 365\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.19351pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tar- Overfull \hbox (23.93463pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 get_age_min: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (25.59468pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 get_age_max: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 125\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tar- Overfull \hbox (17.3646pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 get_gender: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 All\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 ig- Overfull \hbox (32.75435pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 nore_immunity: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 in-cu-ba- Overfull \hbox (58.02399pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 tion_period_override: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Overfull \hbox (10.34447pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 irbc_type: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 mi- Overfull \hbox (42.5643pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 nor_epitope_type: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (10.3446pt too wide) in paragraph at lines 1975--1975 \T1/ptm/m/it/10 msp_type: Underfull \hbox (badness 10000) in paragraph at lines 1975--1975 [][]\T1/ptm/m/it/10 int[][] = [34] Overfull \vbox (3.66997pt too high) has occurred while \output is active [35] Underfull \hbox (badness 5893) in paragraph at lines 2002--2004 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-mo- Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 graphic_coverage: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 float[][] = 1.0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 get_num_individuals: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 rep-e- Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 ti-tions: [][]int[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (22.97314pt too wide) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 timesteps_between_repetitions: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (2.53346pt too wide) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (9.19351pt too wide) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 node_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tar- Underfull \hbox (badness 10000) in paragraph at lines 2060--2060 \T1/ptm/m/it/10 get_age_min: [][]int[][] = [36] Underfull \hbox (badness 5893) in paragraph at lines 2086--2088 []\T1/pcr/b/n/10 repetitions \T1/ptm/m/n/10 ^^U The num-ber of times an in-ter- ven-tion is given, used with [37] Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 \T1/ptm/m/it/10 cide_name: Overfull \hbox (29.51352pt too wide) in paragraph at lines 2127--2127 \T1/ptm/m/it/10 killing_initial_effect: Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 [][]\T1/ptm/m/it/10 float[][] = 1\T1/ptm/m/n/10 , Overfull \hbox (32.87419pt too wide) in paragraph at lines 2127--2127 \T1/ptm/m/it/10 killing_box_duration: Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 [][]\T1/ptm/m/it/10 int[][] = 365\T1/ptm/m/n/10 , Overfull \hbox (74.87367pt too wide) in paragraph at lines 2127--2127 \T1/ptm/m/it/10 killing_exponential_decay_rate: Underfull \hbox (badness 10000) in paragraph at lines 2127--2127 [][]\T1/ptm/m/it/10 float[][] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2169--2169 \T1/ptm/m/it/10 = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spray_coverage: [38] Overfull \hbox (5.18481pt too wide) in paragraph at lines 2194--2194 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , Overfull \hbox (4.35448pt too wide) in paragraph at lines 2194--2194 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2194--2194 \T1/ptm/m/it/10 file- Underfull \hbox (badness 10000) in paragraph at lines 2194--2194 \T1/ptm/m/it/10 name: Underfull \hbox (badness 10000) in paragraph at lines 2194--2194 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 6893) in paragraph at lines 2211--2211 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[] [] = 0\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2255--2255 []\T1/ptm/m/it/10 campaign\T1/ptm/m/n/10 , [39] Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 tar-gets: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 drug: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (8.6847pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 node_ids: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (74.53346pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 ind_property_restrictions: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (81.88365pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 drug_ineligibility_duration: Underfull \hbox (badness 6204) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du- Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 ra-tion: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 - 1\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 broad- Overfull \hbox (41.29442pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 cast_event_name: Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2275--2275 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Re- Overfull \hbox (18.86435pt too wide) in paragraph at lines 2275--2275 \T1/ptm/m/it/10 ceivedTreat- Underfull \hbox (badness 10000) in paragraph at lines 2291--2295 []\T1/pcr/b/n/10 of individuals to target with the intervention. Default is Underfull \hbox (badness 10000) in paragraph at lines 2291--2295 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 properties\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 [ { "trigger":"NewClinicalCase","coverage":0. Underfull \hbox (badness 10000) in paragraph at lines 2291--2295 \T1/pcr/m/n/10 8,"agemin":15,"agemax":70, "seek":0.4,"rate":0.3}, Underfull \hbox (badness 10000) in paragraph at lines 2291--2295 \T1/pcr/m/n/10 {"trigger":"NewSevereCase","coverage":0.8,"seek":0.6, Underfull \hbox (badness 10000) in paragraph at lines 2309--2310 []\T1/pcr/b/n/10 must have to receive the intervention. For example, Underfull \hbox (badness 10000) in paragraph at lines 2309--2310 \T1/ptm/m/n/10 (\T1/pcr/m/sl/10 individuals\T1/ptm/m/n/10 ) ^^U \T1/pcr/m/n/10 ["IndividualProperty1:PropertyValue1", [40] Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , \T1/ptm/m/it/10 start_day: [][]int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dis- Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 \T1/ptm/m/it/10 0.0013698630136986301\T1/ptm/m/n/10 , \T1/ptm/m/it/10 killing_e ff: Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 \T1/ptm/m/it/10 0.0006849315068493151\T1/ptm/m/n/10 , \T1/ptm/m/it/10 iv_name: Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Us-ageDe-pen-de ntBed-net\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2339--2339 \T1/ptm/m/it/10 sonal_dependence: [][]dict[][] = None\T1/ptm/m/n/10 , [41] [42] Underfull \hbox (badness 10000) in paragraph at lines 2538--2538 []\T1/ptm/m/it/10 camp\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2538--2538 \T1/ptm/m/it/10 start_day\T1/ptm/m/n/10 , \T1/ptm/m/it/10 file- [43] Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 clude_vector_state: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 strat- Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 ify_by: [][]str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 GENOME\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , \T1/ ptm/m/it/10 com- Overfull \hbox (9.02399pt too wide) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 bine_similar_genomes: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 spe- Overfull \hbox (102.76315pt too wide) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 cific_genome_combinations_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 al- Overfull \hbox (64.54318pt too wide) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 lele_combinations_for_stratification: Overfull \hbox (2.32376pt too wide) in paragraph at lines 2553--2553 \T1/ptm/m/it/10 les_for_stratification: Underfull \hbox (badness 10000) in paragraph at lines 2553--2553 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [44] Underfull \hbox (badness 10000) in paragraph at lines 2633--2633 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 6893) in paragraph at lines 2652--2652 \T1/ptm/m/it/10 = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 \T1/ptm/m/it/10 ual_property_filter: Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 in-fec- Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 \T1/ptm/m/it/10 tious-ness_bins: Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (4.30418pt too wide) in paragraph at lines 2652--2652 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 7291) in paragraph at lines 2652--2652 [][]\T1/ptm/m/it/10 int[][] = 100\T1/ptm/m/n/10 , \T1/ptm/m/it/10 par-a- Underfull \hbox (badness 10000) in paragraph at lines 2652--2652 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- [45] Underfull \hbox (badness 10000) in paragraph at lines 2713--2713 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i- Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 start_day: Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 nodes: Overfull \hbox (3.20416pt too wide) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 pretty_format: Overfull \hbox (15.2441pt too wide) in paragraph at lines 2729--2729 \T1/ptm/m/it/10 port_description: [46] Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 man- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 i-fest\T1/ptm/m/n/10 , Overfull \hbox (10.35448pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 start_day: Overfull \hbox (6.45485pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 re-port- Overfull \hbox (21.46431pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 int[][] = Overfull \hbox (1.74501pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 re- Overfull \hbox (28.1245pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 port_filename: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 str[][] = Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 Spa- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 tial-Re- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 port- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 Malar- Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 i-aFil- Overfull \hbox (13.23434pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 tered.json\TS1/ptm/m/it/10 '\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 spa- Overfull \hbox (56.87419pt too wide) in paragraph at lines 2769--2769 \T1/ptm/m/it/10 tial_output_channels: Underfull \hbox (badness 10000) in paragraph at lines 2769--2769 [][]\T1/ptm/m/it/10 list[][] = [47] Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 ^^PBlood_Smear_Gametocyte_Prevalence^^Q, ^^PBlood_Smear_Parasite _Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 ^^PCam-paign_Cost^^Q, ^^PDaily_Bites_Per_Human^^Q, ^^PDaily_EIR^ ^Q, ^^PDis-ease_Deaths^^Q, Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 ^^PNew_Reported_Infections^^Q, ^^PNew_Severe_Cases^^Q, ^^PPCR_Ga metocyte_Prevalence^^Q, Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 ^^PPCR_Parasite_Prevalence^^Q, ^^PPfHRP2_Prevalence^^Q, ^^PPop-u -la-tion^^Q, ^^PPreva- Underfull \hbox (badness 10000) in paragraph at lines 2797--2805 \T1/ptm/m/n/10 lence^^Q, ^^PRain-fall^^Q, ^^PRel-a-tive_Humidity^^Q, ^^PTrue_Pr evalence^^Q De-faults: Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 \T1/ptm/m/it/10 start_day: [][]int[][] = Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 6893) in paragraph at lines 2818--2818 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 nodes: Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2818--2818 \T1/ptm/m/it/10 port_description: Underfull \hbox (badness 10000) in paragraph at lines 2839--2839 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 end_day: Underfull \hbox (badness 10000) in paragraph at lines 2839--2839 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- Underfull \hbox (badness 10000) in paragraph at lines 2839--2839 \T1/ptm/m/it/10 clude_infection_table: Underfull \hbox (badness 10000) in paragraph at lines 2839--2839 [][]\T1/ptm/m/it/10 int[][] = 1\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in- [48] Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 re-port-ing_interval: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Overfull \hbox (10.30418pt too wide) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 age_bins: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2901--2901 \T1/ptm/m/it/10 port_description: [49] Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 du-ra-tion_days: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 event_trigger_list: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 list[][] = None\T1/ptm/m/n/10 , Overfull \hbox (10.30418pt too wide) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 max_number_reports: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 int[][] = 365000\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 nodes: [][]list[][] = Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (20.78384pt too wide) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 pretty_format: Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 [][]\T1/ptm/m/it/10 int[][] = 0\T1/ptm/m/n/10 , \T1/ptm/m/it/10 re- Underfull \hbox (badness 10000) in paragraph at lines 2951--2951 \T1/ptm/m/it/10 port_description: [50] Underfull \hbox (badness 10000) in paragraph at lines 3052--3052 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3052--3052 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 in-di-vid- Overfull \hbox (26.78384pt too wide) in paragraph at lines 3052--3052 \T1/ptm/m/it/10 ual_property_to_collect: Underfull \hbox (badness 6526) in paragraph at lines 3052--3052 [][]\T1/ptm/m/it/10 str[][] = \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , \T1/ptm/m/it/ 10 strat- Underfull \hbox (badness 10000) in paragraph at lines 3052--3052 \T1/ptm/m/it/10 ify_by_gender: Overfull \hbox (47.85474pt too wide) in paragraph at lines 3086--3086 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (49.79494pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 man- Overfull \hbox (35.35486pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 i- Overfull \hbox (45.63463pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (46.26491pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 bar- Overfull \hbox (55.34474pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 codes: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (122.7736pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 drug_resistant_strings: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (148.3231pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 drug_resistant_statistic_type: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (240.52356pt too wide) in paragraph at lines 3086--3086 \TS1/ptm/m/it/10 '\T1/ptm/m/it/10 NUM_PEOPLE_WITH_RESISTANT_INFECTION\TS1/ptm/m /it/10 '\T1/ptm/m/n/10 , Overfull \hbox (68.48471pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 age_bins: Overfull \hbox (41.47458pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (52.85487pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (40.35486pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 in- Overfull \hbox (40.35486pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 di- Overfull \hbox (44.7948pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 vid- Overfull \hbox (128.78384pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 ual_property_to_collect: Overfull \hbox (39.80469pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 str[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (36.0248pt too wide) in paragraph at lines 3086--3086 \TS1/ptm/m/it/10 ''\T1/ptm/m/n/10 , Overfull \hbox (50.76463pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 strat- Overfull \hbox (89.68442pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 ify_by_gender: Overfull \hbox (39.8048pt too wide) in paragraph at lines 3086--3086 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (35.99501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 = Overfull \hbox (40.24501pt too wide) in paragraph at lines 3086--3086 \T1/ptm/m/it/10 1\T1/pcr/m/n/10 ) [51] [52] Underfull \hbox (badness 10000) in paragraph at lines 3137--3137 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , \T1/ptm/m/it/10 man-i-fest\T1/ptm/m/n/10 , Overfull \hbox (17.85474pt too wide) in paragraph at lines 3166--3166 []\T1/ptm/m/it/10 task\T1/ptm/m/n/10 , Overfull \hbox (19.79494pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 man- Overfull \hbox (5.35486pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 i- Overfull \hbox (15.63463pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 fest\T1/ptm/m/n/10 , Overfull \hbox (48.68404pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 species_list: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (22.85487pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (20.76463pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 strat- Overfull \hbox (60.89413pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 ify_by_species: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 in- Overfull \hbox (70.75449pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 clude_wolbachia: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (10.35486pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 in- Overfull \hbox (65.80426pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 clude_gestation: Overfull \hbox (9.8048pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 int[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (6.74501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 0\T1/ptm/m/n/10 , Overfull \hbox (16.26491pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 bar- Overfull \hbox (25.34474pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 codes: Overfull \hbox (11.47458pt too wide) in paragraph at lines 3166--3166 [][]\T1/ptm/m/it/10 list[][] Overfull \hbox (5.99501pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 = Overfull \hbox (26.35487pt too wide) in paragraph at lines 3166--3166 \T1/ptm/m/it/10 None\T1/pcr/m/n/10 ) [53] Underfull \hbox (badness 10000) in paragraph at lines 3206--3206 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3206--3206 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 3206--3206 \T1/ptm/m/it/10 En-abled: bool = Underfull \hbox (badness 10000) in paragraph at lines 3254--3254 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3254--3254 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , Underfull \hbox (badness 6348) in paragraph at lines 3254--3254 \T1/ptm/m/it/10 En-abled: bool = [54] Underfull \hbox (badness 10000) in paragraph at lines 3278--3278 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3278--3278 \T1/ptm/m/it/10 = \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3278--3278 \T1/ptm/m/it/10 En-abled: Overfull \hbox (0.5943pt too wide) in paragraph at lines 3278--3278 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (55.2345pt too wide) in paragraph at lines 3303--3303 []\T1/ptm/m/it/10 class_name: Overfull \hbox (15.80469pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 str Overfull \hbox (11.99501pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 = Overfull \hbox (28.85487pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (18.57497pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 pa- Overfull \hbox (24.53493pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 ram- Overfull \hbox (13.01491pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 e- Overfull \hbox (23.4746pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 ters: Overfull \hbox (20.24474pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 dict Overfull \hbox (11.99501pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 = Overfull \hbox (27.5448pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (19.68495pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 En- Overfull \hbox (30.7948pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 abled: Overfull \hbox (23.0249pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 = Overfull \hbox (26.08485pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (66.5943pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (23.0249pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 bool Overfull \hbox (11.99501pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 = Overfull \hbox (29.58485pt too wide) in paragraph at lines 3303--3303 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) Underfull \hbox (badness 5832) in paragraph at lines 3306--3311 \T1/ptm/m/n/10 The re-port can only be used when the sim-u-la-tion setup pa-ram -e-ter \T1/ptm/b/n/10 Malaria_Model \T1/ptm/m/n/10 is set to Overfull \hbox (13.2345pt too wide) in paragraph at lines 3328--3328 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 3328--3328 \T1/ptm/m/it/10 bool = [55] Underfull \hbox (badness 10000) in paragraph at lines 3353--3353 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 3353--3353 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 6236) in paragraph at lines 3401--3401 []\T1/ptm/m/it/10 class_name: str = Underfull \hbox (badness 10000) in paragraph at lines 3401--3401 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3401--3401 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , [56] Underfull \hbox (badness 10000) in paragraph at lines 3425--3425 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 3425--3425 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 3425--3425 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 3425--3425 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 3425--3425 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 3454--3454 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3454--3454 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 3454--3454 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3454--3454 \T1/ptm/m/it/10 En-abled: Overfull \hbox (6.5943pt too wide) in paragraph at lines 3454--3454 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (13.2345pt too wide) in paragraph at lines 3498--3498 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 str = Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 pa-ram-e- Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 tory>\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 bool Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 = True\T1/ptm/m/n/10 , Overfull \hbox (24.5943pt too wide) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 Pretty_Format: Underfull \hbox (badness 10000) in paragraph at lines 3498--3498 \T1/ptm/m/it/10 bool = [57] Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 str = None\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 pa-ram-e-ters: Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 dict = \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En-abled: Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 bool = True\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 3522--3522 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (67.2345pt too wide) in paragraph at lines 3545--3545 []\T1/ptm/m/it/10 class_name: Overfull \hbox (27.80469pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 str Overfull \hbox (23.99501pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 = Overfull \hbox (40.85487pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (30.57497pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 pa- Overfull \hbox (36.53493pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 ram- Overfull \hbox (25.01491pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 e- Overfull \hbox (35.4746pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 ters: Overfull \hbox (32.24474pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 dict Overfull \hbox (23.99501pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 = Overfull \hbox (39.5448pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (31.68495pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 En- Overfull \hbox (42.7948pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 abled: Overfull \hbox (35.0249pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 = Overfull \hbox (38.08485pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 True\T1/ptm/m/n/10 , Overfull \hbox (78.5943pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (35.0249pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 bool Overfull \hbox (23.99501pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 = Overfull \hbox (41.58485pt too wide) in paragraph at lines 3545--3545 \T1/ptm/m/it/10 True\T1/pcr/m/n/10 ) [58] Underfull \hbox (badness 10000) in paragraph at lines 3573--3573 []\T1/ptm/m/it/10 class_name: str Underfull \hbox (badness 7291) in paragraph at lines 3573--3573 \T1/ptm/m/it/10 = None\T1/ptm/m/n/10 , \T1/ptm/m/it/10 pa-ram- Underfull \hbox (badness 10000) in paragraph at lines 3573--3573 \T1/ptm/m/it/10 e-ters: dict = Underfull \hbox (badness 10000) in paragraph at lines 3573--3573 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , \T1/ptm/m/it/10 En- Underfull \hbox (badness 10000) in paragraph at lines 3573--3573 \T1/ptm/m/it/10 Pretty_Format: Overfull \hbox (37.2345pt too wide) in paragraph at lines 3597--3597 []\T1/ptm/m/it/10 class_name: Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 str Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 = Overfull \hbox (10.85487pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 None\T1/ptm/m/n/10 , Overfull \hbox (0.57497pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 pa- Overfull \hbox (6.53493pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 ram- Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 e- Overfull \hbox (5.4746pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 ters: Overfull \hbox (2.24474pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 dict Underfull \hbox (badness 10000) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 = Overfull \hbox (9.5448pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 \T1/ptm/m/n/10 , Overfull \hbox (1.68495pt too wide) in paragraph at lines 3597--3597 \T1/ptm/m/it/10 En- Overfull \hbox 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111--113 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportDrugStatus Overfull \hbox (44.06006pt too wide) in paragraph at lines 113--115 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportEventCounter Overfull \hbox (93.57004pt too wide) in paragraph at lines 115--117 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportHumanMigrationTracking Overfull \hbox (68.25012pt too wide) in paragraph at lines 117--119 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographics Overfull \hbox (136.01923pt too wide) in paragraph at lines 119--121 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.report ers.builtin.ReportNodeDemographicsMalariaGenetics Overfull \hbox (125.03925pt too wide) in paragraph at lines 121--123 []\T1/pcr/m/n/10 config() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 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\T1/ptm/m/it/10 emodpy_malaria.interventions.ivermectin\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 225--227 []\T1/pcr/m/n/10 MalariaDemographics \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Overfull \hbox (36.54083pt too wide) in paragraph at lines 225--227 \T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics\T1/ptm/m/n/10 ) , Underfull \hbox (badness 10000) in paragraph at lines 227--229 []\T1/pcr/m/n/10 MalariaDiagnostic() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 227--229 \T1/ptm/m/it/10 emodpy_malaria.interventions.common\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 229--231 []\T1/pcr/m/n/10 MalariaImmunityReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 231--233 []\T1/pcr/m/n/10 MalariaPatientJSONReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 233--235 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lines 269--271 []\T1/pcr/m/n/10 new_intervention() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 269--271 \T1/ptm/m/it/10 emodpy_malaria.interventions.inputeir\T1/ptm/m/n/10 ), [71] Underfull \hbox (badness 10000) in paragraph at lines 271--273 []\T1/pcr/m/n/10 new_intervention_as_file() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 273--275 []\T1/pcr/m/n/10 new_intervention_as_file() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 275--277 []\T1/pcr/m/n/10 new_intervention_as_file() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 277--279 []\T1/pcr/m/n/10 new_intervention_as_file() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 279--281 []\T1/pcr/m/n/10 new_intervention_as_file() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox 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paragraph at lines 314--316 []\T1/pcr/m/n/10 parameters \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.repo rters.builtin.ReportVectorMigration Overfull \hbox (45.50998pt too wide) in paragraph at lines 316--318 []\T1/pcr/m/n/10 parameters \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.repo rters.builtin.ReportVectorStats Overfull \hbox (113.27908pt too wide) in paragraph at lines 318--320 []\T1/pcr/m/n/10 parameters \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.repo rters.builtin.ReportVectorStatsMalariaGenetics Overfull \hbox (93.02942pt too wide) in paragraph at lines 320--322 []\T1/pcr/m/n/10 parameters \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.repo rters.builtin.SpatialReportMalariaFiltered Overfull \hbox (56.61995pt too wide) in paragraph at lines 322--324 []\T1/pcr/m/n/10 parameters \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.repo rters.builtin.VectorHabitatReport Underfull \hbox (badness 10000) in paragraph at lines 327--329 []\T1/pcr/m/n/10 ReportDrugStatus 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Underfull \hbox (badness 10000) in paragraph at lines 343--345 []\T1/pcr/m/n/10 ReportVectorStats \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in Underfull \hbox (badness 10000) in paragraph at lines 350--352 []\T1/pcr/m/n/10 set_drug_param() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Overfull \hbox (179.8501pt too wide) in paragraph at lines 354--356 []\T1/pcr/m/n/10 set_risk_high() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria .demographics.MalariaDemographics.MalariaDemographics Underfull \hbox (badness 10000) in paragraph at lines 356--358 []\T1/pcr/m/n/10 set_risk_lowmedium() Overfull \hbox (127.95007pt too wide) in paragraph at lines 356--358 \T1/ptm/m/n/10 (\T1/ptm/m/it/10 emodpy_malaria.demographics.MalariaDemographics .MalariaDemographics Underfull \hbox (badness 10000) in paragraph at lines 358--360 []\T1/pcr/m/n/10 set_species_param() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 360--362 []\T1/pcr/m/n/10 set_species_param() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 362--364 []\T1/pcr/m/n/10 set_team_defaults() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 364--366 []\T1/pcr/m/n/10 set_team_defaults() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 366--368 []\T1/pcr/m/n/10 set_team_drug_params() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod- ule Underfull \hbox (badness 10000) in paragraph at lines 368--370 []\T1/pcr/m/n/10 SpaceSpraying() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 368--370 \T1/ptm/m/it/10 emodpy_malaria.interventions.spacespraying\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 370--372 []\T1/pcr/m/n/10 SpatialReportMalariaFiltered \T1/ptm/m/n/10 (\T1/ptm/m/it/10 c lass in Underfull \hbox (badness 10000) in paragraph at lines 372--374 []\T1/pcr/m/n/10 SugarTrap() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 372--374 \T1/ptm/m/it/10 emodpy_malaria.interventions.sugartrap\T1/ptm/m/n/10 ), [72] Underfull \hbox (badness 10000) in paragraph at lines 377--379 []\T1/pcr/m/n/10 UDBednet() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 377--379 \T1/ptm/m/it/10 emodpy_malaria.interventions.udbednet\T1/ptm/m/n/10 ), Underfull \hbox (badness 10000) in paragraph at lines 382--384 []\T1/pcr/m/n/10 VectorHabitatReport \T1/ptm/m/n/10 (\T1/ptm/m/it/10 class in [73]) (./institute-for-disease-modeling-emodpy-malaria.aux) ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on institute-for-disease-modeling-emodpy-malaria.pdf (77 pages, 307672 bytes). 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