Read the Docs build information
Build id: 508272
Project: life-epigenetics-methylcheck
Version: latest
Commit: 2ae6ad66390dcaeda3aaecdd02df906a2a5add29
Date: 2020-12-15T15:56:46.662502Z
State: finished
Success: False


[rtd-command-info] start-time: 2020-12-15T15:56:47.937216Z, end-time: 2020-12-15T15:56:55.548757Z, duration: 7, exit-code: 0
git clone --no-single-branch --depth 50 https://github.com/FOXOBioScience/methylcheck.git .
Cloning into '.'...
Checking out files:  42% (54/128)   
Checking out files:  43% (56/128)   
Checking out files:  44% (57/128)   
Checking out files:  45% (58/128)   
Checking out files:  46% (59/128)   
Checking out files:  47% (61/128)   
Checking out files:  48% (62/128)   
Checking out files:  49% (63/128)   
Checking out files:  50% (64/128)   
Checking out files:  51% (66/128)   
Checking out files:  52% (67/128)   
Checking out files:  53% (68/128)   
Checking out files:  54% (70/128)   
Checking out files:  55% (71/128)   
Checking out files:  56% (72/128)   
Checking out files:  57% (73/128)   
Checking out files:  58% (75/128)   
Checking out files:  59% (76/128)   
Checking out files:  60% (77/128)   
Checking out files:  61% (79/128)   
Checking out files:  62% (80/128)   
Checking out files:  63% (81/128)   
Checking out files:  64% (82/128)   
Checking out files:  65% (84/128)   
Checking out files:  66% (85/128)   
Checking out files:  67% (86/128)   
Checking out files:  68% (88/128)   
Checking out files:  69% (89/128)   
Checking out files:  70% (90/128)   
Checking out files:  71% (91/128)   
Checking out files:  72% (93/128)   
Checking out files:  73% (94/128)   
Checking out files:  74% (95/128)   
Checking out files:  75% (96/128)   
Checking out files:  76% (98/128)   
Checking out files:  77% (99/128)   
Checking out files:  78% (100/128)   
Checking out files:  79% (102/128)   
Checking out files:  80% (103/128)   
Checking out files:  81% (104/128)   
Checking out files:  82% (105/128)   
Checking out files:  83% (107/128)   
Checking out files:  84% (108/128)   
Checking out files:  85% (109/128)   
Checking out files:  86% (111/128)   
Checking out files:  87% (112/128)   
Checking out files:  88% (113/128)   
Checking out files:  89% (114/128)   
Checking out files:  90% (116/128)   
Checking out files:  91% (117/128)   
Checking out files:  92% (118/128)   
Checking out files:  93% (120/128)   
Checking out files:  94% (121/128)   
Checking out files:  95% (122/128)   
Checking out files:  96% (123/128)   
Checking out files:  97% (125/128)   
Checking out files:  98% (126/128)   
Checking out files:  99% (127/128)   
Checking out files: 100% (128/128)   
Checking out files: 100% (128/128), done.

[rtd-command-info] start-time: 2020-12-15T15:56:56.225218Z, end-time: 2020-12-15T15:56:57.189334Z, duration: 0, exit-code: 0
git checkout --force origin/master
Note: checking out 'origin/master'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by performing another checkout.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -b with the checkout command again. Example:

  git checkout -b <new-branch-name>

HEAD is now at 2ae6ad6 mouse array support and unit testing

[rtd-command-info] start-time: 2020-12-15T15:56:57.359735Z, end-time: 2020-12-15T15:56:57.416530Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2020-12-15T15:57:01.590275Z, end-time: 2020-12-15T15:57:06.659493Z, duration: 5, exit-code: 0
python3.7 -mvirtualenv --system-site-packages 
Using base prefix '/home/docs/.pyenv/versions/3.7.9'
New python executable in /home/docs/checkouts/readthedocs.org/user_builds/life-epigenetics-methylcheck/envs/latest/bin/python3.7
Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/life-epigenetics-methylcheck/envs/latest/bin/python
Installing setuptools, pip, wheel...
done.

[rtd-command-info] start-time: 2020-12-15T15:57:06.869028Z, end-time: 2020-12-15T15:57:08.601294Z, duration: 1, exit-code: 0
python -m pip install --upgrade --no-cache-dir pip
Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/life-epigenetics-methylcheck/envs/latest/lib/python3.7/site-packages (20.3.3)

[rtd-command-info] start-time: 2020-12-15T15:57:08.933868Z, end-time: 2020-12-15T15:57:18.113326Z, duration: 9, exit-code: 0
python -m pip install --upgrade --no-cache-dir -I setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 six commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<2.2
Collecting commonmark==0.8.1
  Downloading commonmark-0.8.1-py2.py3-none-any.whl (47 kB)
Collecting docutils==0.14
  Downloading docutils-0.14-py3-none-any.whl (543 kB)
Collecting mock==1.0.1
  Downloading mock-1.0.1.zip (861 kB)
Collecting pillow==5.4.1
  Downloading Pillow-5.4.1-cp37-cp37m-manylinux1_x86_64.whl (2.0 MB)
Collecting recommonmark==0.5.0
  Downloading recommonmark-0.5.0-py2.py3-none-any.whl (9.8 kB)
Collecting alabaster!=0.7.5,<0.8,>=0.7
  Downloading alabaster-0.7.12-py2.py3-none-any.whl (14 kB)
Collecting readthedocs-sphinx-ext<2.2
  Downloading readthedocs_sphinx_ext-2.1.1-py2.py3-none-any.whl (13 kB)
Collecting sphinx<2
  Downloading Sphinx-1.8.5-py2.py3-none-any.whl (3.1 MB)
Collecting six
  Downloading six-1.15.0-py2.py3-none-any.whl (10 kB)
Collecting sphinx-rtd-theme<0.5
  Downloading sphinx_rtd_theme-0.4.3-py2.py3-none-any.whl (6.4 MB)
Collecting babel!=2.0,>=1.3
  Downloading Babel-2.9.0-py2.py3-none-any.whl (8.8 MB)
Collecting Jinja2>=2.9
  Downloading Jinja2-2.11.2-py2.py3-none-any.whl (125 kB)
Collecting MarkupSafe>=0.23
  Downloading MarkupSafe-1.1.1-cp37-cp37m-manylinux1_x86_64.whl (27 kB)
Collecting Pygments>=2.0
  Downloading Pygments-2.7.3-py3-none-any.whl (950 kB)
Collecting pytz>=2015.7
  Downloading pytz-2020.4-py2.py3-none-any.whl (509 kB)
Collecting requests
  Downloading requests-2.25.0-py2.py3-none-any.whl (61 kB)
Collecting certifi>=2017.4.17
  Downloading certifi-2020.12.5-py2.py3-none-any.whl (147 kB)
Collecting chardet<4,>=3.0.2
  Downloading chardet-3.0.4-py2.py3-none-any.whl (133 kB)
Collecting idna<3,>=2.5
  Downloading idna-2.10-py2.py3-none-any.whl (58 kB)
Collecting snowballstemmer>=1.1
  Downloading snowballstemmer-2.0.0-py2.py3-none-any.whl (97 kB)
Collecting urllib3<1.27,>=1.21.1
  Downloading urllib3-1.26.2-py2.py3-none-any.whl (136 kB)
Collecting future
  Downloading future-0.18.2.tar.gz (829 kB)
Collecting imagesize
  Downloading imagesize-1.2.0-py2.py3-none-any.whl (4.8 kB)
Collecting packaging
  Downloading packaging-20.8-py2.py3-none-any.whl (39 kB)
Collecting pyparsing>=2.0.2
  Downloading pyparsing-2.4.7-py2.py3-none-any.whl (67 kB)
Collecting sphinxcontrib-websupport
  Downloading sphinxcontrib_websupport-1.2.4-py2.py3-none-any.whl (39 kB)
Collecting sphinxcontrib-serializinghtml
  Downloading sphinxcontrib_serializinghtml-1.1.4-py2.py3-none-any.whl (89 kB)
Collecting setuptools==41.0.1
  Downloading setuptools-41.0.1-py2.py3-none-any.whl (575 kB)
Building wheels for collected packages: mock, future
  Building wheel for mock (setup.py): started
  Building wheel for mock (setup.py): finished with status 'done'
  Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23755 sha256=c893e0667b0ddb5030d4b5d7a5ab9b6549c02af24c3410f1a52e0d70e9208300
  Stored in directory: /tmp/pip-ephem-wheel-cache-btn9_dtc/wheels/7a/94/b1/0fdc5339a5bd487a5cc15421ec200d9ba3e2aa7190e4a727f1
  Building wheel for future (setup.py): started
  Building wheel for future (setup.py): finished with status 'done'
  Created wheel for future: filename=future-0.18.2-py3-none-any.whl size=491059 sha256=a34bb989d63664f131ddd62a8ed84622e2c48c160f22795a1fb593d428abec0c
  Stored in directory: /tmp/pip-ephem-wheel-cache-btn9_dtc/wheels/56/b0/fe/4410d17b32f1f0c3cf54cdfb2bc04d7b4b8f4ae377e2229ba0
Successfully built mock future
Installing collected packages: urllib3, sphinxcontrib-serializinghtml, pytz, pyparsing, MarkupSafe, idna, chardet, certifi, sphinxcontrib-websupport, snowballstemmer, six, setuptools, requests, Pygments, packaging, Jinja2, imagesize, future, docutils, babel, alabaster, sphinx, commonmark, sphinx-rtd-theme, recommonmark, readthedocs-sphinx-ext, pillow, mock
ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
matplotlib 3.3.2 requires pillow>=6.2.0, but you have pillow 5.4.1 which is incompatible.
Successfully installed Jinja2-2.11.2 MarkupSafe-1.1.1 Pygments-2.7.3 alabaster-0.7.12 babel-2.9.0 certifi-2020.12.5 chardet-3.0.4 commonmark-0.8.1 docutils-0.14 future-0.18.2 idna-2.10 imagesize-1.2.0 mock-1.0.1 packaging-20.8 pillow-5.4.1 pyparsing-2.4.7 pytz-2020.4 readthedocs-sphinx-ext-2.1.1 recommonmark-0.5.0 requests-2.25.0 setuptools-51.0.0 six-1.15.0 snowballstemmer-2.0.0 sphinx-1.8.5 sphinx-rtd-theme-0.4.3 sphinxcontrib-serializinghtml-1.1.4 sphinxcontrib-websupport-1.2.4 urllib3-1.26.2

[rtd-command-info] start-time: 2020-12-15T15:57:18.258910Z, end-time: 2020-12-15T15:57:18.887098Z, duration: 0, exit-code: 1
python -m pip install --exists-action=w --no-cache-dir -r docs/requirements.txt
ERROR: Could not open requirements file: [Errno 2] No such file or directory: 'docs/requirements.txt'