Read the Docs build information
Build id: 332536
Project: tiledb-inc-tiledb-py
Version: latest
Commit: 8757640c12765c5132a00eb469ac398a69410935
Date: 2020-05-18T14:01:40.847081Z
State: finished
Success: False


[rtd-command-info] start-time: 2020-05-18T14:01:43.068162Z, end-time: 2020-05-18T14:01:44.154812Z, duration: 1, exit-code: 0
git clone --no-single-branch --depth 50 https://github.com/TileDB-Inc/TileDB-Py.git .
Cloning into '.'...

[rtd-command-info] start-time: 2020-05-18T14:01:44.719158Z, end-time: 2020-05-18T14:01:44.926296Z, duration: 0, exit-code: 0
git checkout --force origin/dev
Note: checking out 'origin/dev'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by performing another checkout.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -b with the checkout command again. Example:

  git checkout -b <new-branch-name>

HEAD is now at 8757640 Fix link in README and add link to PyPI package

[rtd-command-info] start-time: 2020-05-18T14:01:45.333973Z, end-time: 2020-05-18T14:01:45.534812Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2020-05-18T14:01:46.990041Z, end-time: 2020-05-18T14:01:50.791848Z, duration: 3, exit-code: 0
python3.7 -mvirtualenv  
Using base prefix '/home/docs/.pyenv/versions/3.7.3'
New python executable in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/bin/python3.7
Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/bin/python
Installing setuptools, pip, wheel...
done.

[rtd-command-info] start-time: 2020-05-18T14:01:50.914550Z, end-time: 2020-05-18T14:01:51.689166Z, duration: 0, exit-code: 0
python -m pip install --upgrade --no-cache-dir pip
Requirement already up-to-date: pip in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (20.1)

[rtd-command-info] start-time: 2020-05-18T14:01:52.105958Z, end-time: 2020-05-18T14:02:01.335187Z, duration: 9, exit-code: 0
python -m pip install --upgrade --no-cache-dir Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<1.1
Collecting Pygments==2.3.1
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Building wheels for collected packages: mock, future
  Building wheel for mock (setup.py): started
  Building wheel for mock (setup.py): finished with status 'done'
  Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23754 sha256=0e7a40e92fc9a6ae4484e976b6d957b2f045a6b7af802be883a88f0fd3d0e7d0
  Stored in directory: /tmp/pip-ephem-wheel-cache-bwzrv_cr/wheels/16/03/37/f0a64ab894c9102906f192db1a4071b7592292ad661563c69b
  Building wheel for future (setup.py): started
  Building wheel for future (setup.py): finished with status 'done'
  Created wheel for future: filename=future-0.18.2-py3-none-any.whl size=491058 sha256=6475e41a60f1ec5bacdce1fa09a26e8c1cfa711913dc53fa2fb691f7c1f29c1e
  Stored in directory: /tmp/pip-ephem-wheel-cache-bwzrv_cr/wheels/56/b0/fe/4410d17b32f1f0c3cf54cdfb2bc04d7b4b8f4ae377e2229ba0
Successfully built mock future
Installing collected packages: Pygments, setuptools, docutils, mock, pillow, alabaster, future, commonmark, sphinxcontrib-websupport, pytz, babel, urllib3, chardet, certifi, idna, requests, MarkupSafe, Jinja2, six, imagesize, snowballstemmer, pyparsing, packaging, sphinx, recommonmark, sphinx-rtd-theme, readthedocs-sphinx-ext
  Attempting uninstall: setuptools
    Found existing installation: setuptools 46.4.0
    Uninstalling setuptools-46.4.0:
      Successfully uninstalled setuptools-46.4.0
Successfully installed Jinja2-2.11.2 MarkupSafe-1.1.1 Pygments-2.3.1 alabaster-0.7.12 babel-2.8.0 certifi-2020.4.5.1 chardet-3.0.4 commonmark-0.8.1 docutils-0.14 future-0.18.2 idna-2.9 imagesize-1.2.0 mock-1.0.1 packaging-20.3 pillow-5.4.1 pyparsing-2.4.7 pytz-2020.1 readthedocs-sphinx-ext-1.0.3 recommonmark-0.5.0 requests-2.23.0 setuptools-41.0.1 six-1.14.0 snowballstemmer-2.0.0 sphinx-1.8.5 sphinx-rtd-theme-0.4.3 sphinxcontrib-websupport-1.2.2 urllib3-1.25.9

[rtd-command-info] start-time: 2020-05-18T14:02:01.453606Z, end-time: 2020-05-18T14:02:14.910133Z, duration: 13, exit-code: 0
python -m pip install --exists-action=w --no-cache-dir -r requirements.txt
Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (from -r requirements.txt (line 1)) (41.0.1)
Requirement already satisfied: wheel in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (from -r requirements.txt (line 2)) (0.34.2)
Collecting numpy==1.16.*
  Downloading numpy-1.16.6-cp37-cp37m-manylinux1_x86_64.whl (17.3 MB)
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Collecting cython
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Collecting dask
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Collecting pandas
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Collecting psutil
  Downloading psutil-5.7.0.tar.gz (449 kB)
Collecting importlib-metadata<2,>=0.12; python_version < "3.8"
  Downloading importlib_metadata-1.6.0-py2.py3-none-any.whl (30 kB)
Collecting toml>=0.9.4
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Collecting py<2,>=1.4.17
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Collecting filelock<4,>=3.0.0
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Requirement already satisfied: packaging>=14 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (from tox->-r requirements.txt (line 4)) (20.3)
Requirement already satisfied: six<2,>=1.14.0 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (from tox->-r requirements.txt (line 4)) (1.14.0)
Collecting virtualenv!=20.0.0,!=20.0.1,!=20.0.2,!=20.0.3,!=20.0.4,!=20.0.5,!=20.0.6,!=20.0.7,>=16.0.0
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Requirement already satisfied: pytz>=2017.2 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (from pandas->-r requirements.txt (line 8)) (2020.1)
Collecting zipp>=0.5
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Requirement already satisfied: pyparsing>=2.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (from packaging>=14->tox->-r requirements.txt (line 4)) (2.4.7)
Collecting distlib<1,>=0.3.0
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Collecting appdirs<2,>=1.4.3
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Building wheels for collected packages: psutil, distlib
  Building wheel for psutil (setup.py): started
  Building wheel for psutil (setup.py): finished with status 'done'
  Created wheel for psutil: filename=psutil-5.7.0-cp37-cp37m-linux_x86_64.whl size=276469 sha256=f8a577e835116d9814dd841b6a0f9c4e4ed4b01dda0b242e8228c96b0c55c243
  Stored in directory: /tmp/pip-ephem-wheel-cache-soimifbk/wheels/b6/e7/50/aee9cc966163d74430f13f208171dee22f11efa4a4a826661c
  Building wheel for distlib (setup.py): started
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  Created wheel for distlib: filename=distlib-0.3.0-py3-none-any.whl size=340427 sha256=9dc2b5daf4e5d5bd5863083de6bdc4d71868df29fe4f0a4415dbe962ebf660c7
  Stored in directory: /tmp/pip-ephem-wheel-cache-soimifbk/wheels/a2/19/da/a15d4e2bedf3062c739b190d5cb5b7b2ecfbccb6b0d93c861b
Successfully built psutil distlib
Installing collected packages: numpy, zipp, importlib-metadata, toml, pluggy, py, filelock, distlib, appdirs, virtualenv, tox, setuptools-scm, cython, dask, python-dateutil, pandas, psutil
Successfully installed appdirs-1.4.4 cython-0.29.17 dask-2.16.0 distlib-0.3.0 filelock-3.0.12 importlib-metadata-1.6.0 numpy-1.16.6 pandas-1.0.3 pluggy-0.13.1 psutil-5.7.0 py-1.8.1 python-dateutil-2.8.1 setuptools-scm-3.5.0 toml-0.10.1 tox-3.15.0 virtualenv-20.0.20 zipp-3.1.0

[rtd-command-info] start-time: 2020-05-18T14:02:15.054231Z, end-time: 2020-05-18T14:02:18.979276Z, duration: 3, exit-code: 1
python ./setup.py install --force
libtiledb_exists checking 'library_dirs': []
libtiledb_exists found: 'None'
running install
running bdist_egg
GNU Make 4.1
Built for x86_64-pc-linux-gnu
Copyright (C) 1988-2014 Free Software Foundation, Inc.
License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.
libtiledb_exists checking 'library_dirs': []
libtiledb_exists found: 'None'
Downloading TileDB package from dev...
Building libtiledb in directory /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-dev/build...
CMake configure command: ['cmake', '-DCMAKE_INSTALL_PREFIX=/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-dev/dist', '-DTILEDB_TESTS=OFF', '-DTILEDB_S3=ON', '-DTILEDB_HDFS=ON', '-DTILEDB_INSTALL_LIBDIR=lib', '-DTILEDB_CPP_API=ON', '-DTILEDB_LOG_OUTPUT_ON_FAILURE=ON', '-DTILEDB_FORCE_ALL_DEPS:BOOL=OFF', '-DTILEDB_SERIALIZATION:BOOL=OFF', '-DCMAKE_BUILD_TYPE=Release', '/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-dev']
/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools_scm/git.py:68: UserWarning: "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest" is shallow and may cause errors
  warnings.warn('"{}" is shallow and may cause errors'.format(wd.path))
error: [Errno 2] No such file or directory: 'cmake': 'cmake'