Read the Docs build information Build id: 310311 Project: tiledb-inc-tiledb-py Version: latest Commit: 0369ef1c505f091b3fa03e19a9954a3f40889179 Date: 2020-04-01T13:48:41.351353Z State: finished Success: False [rtd-command-info] start-time: 2020-04-01T13:48:44.046801Z, end-time: 2020-04-01T13:48:45.089422Z, duration: 1, exit-code: 0 git clone --no-single-branch --depth 50 https://github.com/TileDB-Inc/TileDB-Py.git . Cloning into '.'... [rtd-command-info] start-time: 2020-04-01T13:48:45.803074Z, end-time: 2020-04-01T13:48:46.003137Z, duration: 0, exit-code: 0 git checkout --force origin/dev Note: checking out 'origin/dev'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at 0369ef1 Add support for tiledb_array_vacuum and tests [rtd-command-info] start-time: 2020-04-01T13:48:46.158780Z, end-time: 2020-04-01T13:48:46.353157Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2020-04-01T13:48:48.105558Z, end-time: 2020-04-01T13:48:51.736136Z, duration: 3, exit-code: 0 python3.7 -mvirtualenv Using base prefix '/home/docs/.pyenv/versions/3.7.3' New python executable in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/bin/python3.7 Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/bin/python Installing setuptools, pip, wheel... done. [rtd-command-info] start-time: 2020-04-01T13:48:51.896231Z, end-time: 2020-04-01T13:48:52.642358Z, duration: 0, exit-code: 0 python -m pip install --upgrade --no-cache-dir pip Requirement already up-to-date: pip in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (20.0.2) [rtd-command-info] start-time: 2020-04-01T13:48:53.111954Z, end-time: 2020-04-01T13:49:01.764452Z, duration: 8, exit-code: 0 python -m pip install --upgrade --no-cache-dir Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<1.1 Collecting Pygments==2.3.1 Downloading Pygments-2.3.1-py2.py3-none-any.whl (849 kB) Collecting setuptools==41.0.1 Downloading setuptools-41.0.1-py2.py3-none-any.whl (575 kB) Collecting docutils==0.14 Downloading docutils-0.14-py3-none-any.whl (543 kB) Collecting mock==1.0.1 Downloading mock-1.0.1.tar.gz (818 kB) Collecting pillow==5.4.1 Downloading Pillow-5.4.1-cp37-cp37m-manylinux1_x86_64.whl (2.0 MB) Collecting alabaster!=0.7.5,<0.8,>=0.7 Downloading alabaster-0.7.12-py2.py3-none-any.whl (14 kB) Collecting commonmark==0.8.1 Downloading commonmark-0.8.1-py2.py3-none-any.whl (47 kB) Collecting recommonmark==0.5.0 Downloading recommonmark-0.5.0-py2.py3-none-any.whl (9.8 kB) Collecting sphinx<2 Downloading Sphinx-1.8.5-py2.py3-none-any.whl (3.1 MB) Collecting sphinx-rtd-theme<0.5 Downloading sphinx_rtd_theme-0.4.3-py2.py3-none-any.whl (6.4 MB) Collecting readthedocs-sphinx-ext<1.1 Downloading readthedocs_sphinx_ext-1.0.1-py2.py3-none-any.whl (14 kB) Collecting future Downloading future-0.18.2.tar.gz (829 kB) Collecting requests>=2.0.0 Downloading requests-2.23.0-py2.py3-none-any.whl (58 kB) Collecting sphinxcontrib-websupport Downloading sphinxcontrib_websupport-1.2.1-py2.py3-none-any.whl (39 kB) Collecting imagesize Downloading imagesize-1.2.0-py2.py3-none-any.whl (4.8 kB) Collecting snowballstemmer>=1.1 Downloading snowballstemmer-2.0.0-py2.py3-none-any.whl (97 kB) Collecting packaging Downloading packaging-20.3-py2.py3-none-any.whl (37 kB) Collecting babel!=2.0,>=1.3 Downloading Babel-2.8.0-py2.py3-none-any.whl (8.6 MB) Collecting six>=1.5 Downloading six-1.14.0-py2.py3-none-any.whl (10 kB) Collecting Jinja2>=2.3 Downloading Jinja2-2.11.1-py2.py3-none-any.whl (126 kB) Collecting chardet<4,>=3.0.2 Downloading chardet-3.0.4-py2.py3-none-any.whl (133 kB) Collecting certifi>=2017.4.17 Downloading certifi-2019.11.28-py2.py3-none-any.whl (156 kB) Collecting idna<3,>=2.5 Downloading idna-2.9-py2.py3-none-any.whl (58 kB) Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 Downloading urllib3-1.25.8-py2.py3-none-any.whl (125 kB) Collecting pyparsing>=2.0.2 Downloading pyparsing-2.4.6-py2.py3-none-any.whl (67 kB) Collecting pytz>=2015.7 Downloading pytz-2019.3-py2.py3-none-any.whl (509 kB) Collecting MarkupSafe>=0.23 Downloading MarkupSafe-1.1.1-cp37-cp37m-manylinux1_x86_64.whl (27 kB) Building wheels for collected packages: mock, future Building wheel for mock (setup.py): started Building wheel for mock (setup.py): finished with status 'done' Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23754 sha256=a06cfef3c16709e707295e5e5e835c93410d69b75caa0d0551c2d5fa4c7c3fd3 Stored in directory: /tmp/pip-ephem-wheel-cache-2dq2aomg/wheels/16/03/37/f0a64ab894c9102906f192db1a4071b7592292ad661563c69b Building wheel for future (setup.py): started Building wheel for future (setup.py): finished with status 'done' Created wheel for future: filename=future-0.18.2-py3-none-any.whl size=491058 sha256=bfbc00195e1bd7e2cd1359f39e9c25af4351fb2a7caa87d38cb84e10e6fc63ce Stored in directory: /tmp/pip-ephem-wheel-cache-2dq2aomg/wheels/56/b0/fe/4410d17b32f1f0c3cf54cdfb2bc04d7b4b8f4ae377e2229ba0 Successfully built mock future Installing collected packages: Pygments, setuptools, docutils, mock, pillow, alabaster, future, commonmark, chardet, certifi, idna, urllib3, requests, sphinxcontrib-websupport, imagesize, snowballstemmer, pyparsing, six, packaging, pytz, babel, MarkupSafe, Jinja2, sphinx, recommonmark, sphinx-rtd-theme, readthedocs-sphinx-ext Attempting uninstall: setuptools Found existing installation: setuptools 46.1.3 Uninstalling setuptools-46.1.3: Successfully uninstalled setuptools-46.1.3 Successfully installed Jinja2-2.11.1 MarkupSafe-1.1.1 Pygments-2.3.1 alabaster-0.7.12 babel-2.8.0 certifi-2019.11.28 chardet-3.0.4 commonmark-0.8.1 docutils-0.14 future-0.18.2 idna-2.9 imagesize-1.2.0 mock-1.0.1 packaging-20.3 pillow-5.4.1 pyparsing-2.4.6 pytz-2019.3 readthedocs-sphinx-ext-1.0.1 recommonmark-0.5.0 requests-2.23.0 setuptools-41.0.1 six-1.14.0 snowballstemmer-2.0.0 sphinx-1.8.5 sphinx-rtd-theme-0.4.3 sphinxcontrib-websupport-1.2.1 urllib3-1.25.8 [rtd-command-info] start-time: 2020-04-01T13:49:01.934936Z, end-time: 2020-04-01T13:49:14.194495Z, duration: 12, exit-code: 0 python -m pip install --exists-action=w --no-cache-dir -r requirements.txt Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (from -r requirements.txt (line 1)) (41.0.1) Requirement already satisfied: wheel in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (from -r requirements.txt (line 2)) (0.34.2) Collecting numpy==1.16.* Downloading numpy-1.16.6-cp37-cp37m-manylinux1_x86_64.whl (17.3 MB) Collecting tox Downloading tox-3.14.6-py2.py3-none-any.whl (81 kB) Collecting setuptools-scm Downloading setuptools_scm-3.5.0-py2.py3-none-any.whl (26 kB) Collecting cython Downloading Cython-0.29.16-cp37-cp37m-manylinux1_x86_64.whl (2.1 MB) Collecting dask Downloading dask-2.13.0-py3-none-any.whl (791 kB) Collecting pandas Downloading pandas-1.0.3-cp37-cp37m-manylinux1_x86_64.whl (10.0 MB) Collecting psutil Downloading psutil-5.7.0.tar.gz (449 kB) Collecting virtualenv!=20.0.0,!=20.0.1,!=20.0.2,!=20.0.3,!=20.0.4,!=20.0.5,!=20.0.6,!=20.0.7,>=16.0.0 Downloading virtualenv-20.0.15-py2.py3-none-any.whl (4.6 MB) Collecting pluggy<1,>=0.12.0 Downloading pluggy-0.13.1-py2.py3-none-any.whl (18 kB) Requirement already satisfied: six<2,>=1.14.0 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (from tox->-r requirements.txt (line 4)) (1.14.0) Collecting toml>=0.9.4 Downloading toml-0.10.0-py2.py3-none-any.whl (25 kB) Collecting filelock<4,>=3.0.0 Downloading filelock-3.0.12-py3-none-any.whl (7.6 kB) Requirement already satisfied: packaging>=14 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (from tox->-r requirements.txt (line 4)) (20.3) Collecting py<2,>=1.4.17 Downloading py-1.8.1-py2.py3-none-any.whl (83 kB) Collecting importlib-metadata<2,>=0.12; python_version < "3.8" Downloading importlib_metadata-1.6.0-py2.py3-none-any.whl (30 kB) Requirement already satisfied: pytz>=2017.2 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (from pandas->-r requirements.txt (line 8)) (2019.3) Collecting python-dateutil>=2.6.1 Downloading python_dateutil-2.8.1-py2.py3-none-any.whl (227 kB) Collecting appdirs<2,>=1.4.3 Downloading appdirs-1.4.3-py2.py3-none-any.whl (12 kB) Collecting distlib<1,>=0.3.0 Downloading distlib-0.3.0.zip (571 kB) Requirement already satisfied: pyparsing>=2.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages (from packaging>=14->tox->-r requirements.txt (line 4)) (2.4.6) Collecting zipp>=0.5 Downloading zipp-3.1.0-py3-none-any.whl (4.9 kB) Building wheels for collected packages: psutil, distlib Building wheel for psutil (setup.py): started Building wheel for psutil (setup.py): finished with status 'done' Created wheel for psutil: filename=psutil-5.7.0-cp37-cp37m-linux_x86_64.whl size=276466 sha256=d481c9a567c66b3dbf81c123525be9ffa96c2b52a3d0d2c86ef26a8e0ca768c0 Stored in directory: /tmp/pip-ephem-wheel-cache-n8q2dap6/wheels/b6/e7/50/aee9cc966163d74430f13f208171dee22f11efa4a4a826661c Building wheel for distlib (setup.py): started Building wheel for distlib (setup.py): finished with status 'done' Created wheel for distlib: filename=distlib-0.3.0-py3-none-any.whl size=340427 sha256=be2ceb505fe70b2c3260d64db62a7b68d04095d83d15f44d4eb07ec9d42fd77a Stored in directory: /tmp/pip-ephem-wheel-cache-n8q2dap6/wheels/a2/19/da/a15d4e2bedf3062c739b190d5cb5b7b2ecfbccb6b0d93c861b Successfully built psutil distlib Installing collected packages: numpy, filelock, appdirs, distlib, zipp, importlib-metadata, virtualenv, pluggy, toml, py, tox, setuptools-scm, cython, dask, python-dateutil, pandas, psutil Successfully installed appdirs-1.4.3 cython-0.29.16 dask-2.13.0 distlib-0.3.0 filelock-3.0.12 importlib-metadata-1.6.0 numpy-1.16.6 pandas-1.0.3 pluggy-0.13.1 psutil-5.7.0 py-1.8.1 python-dateutil-2.8.1 setuptools-scm-3.5.0 toml-0.10.0 tox-3.14.6 virtualenv-20.0.15 zipp-3.1.0 [rtd-command-info] start-time: 2020-04-01T13:49:14.359088Z, end-time: 2020-04-01T13:49:15.197889Z, duration: 0, exit-code: 1 python ./setup.py install --force libtiledb_exists checking 'library_dirs': [] libtiledb_exists found: 'None' Traceback (most recent call last): File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 154, in save_modules yield saved File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 195, in setup_context yield File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 250, in run_setup _execfile(setup_script, ns) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 45, in _execfile exec(code, globals, locals) File "/tmp/easy_install-8o__04u4/cmake-3.16.3/setup.py", line 7, in import subprocess ModuleNotFoundError: No module named 'skbuild' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "./setup.py", line 615, in 'Programming Language :: Python :: 3.8', File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/__init__.py", line 144, in setup _install_setup_requires(attrs) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/__init__.py", line 139, in _install_setup_requires dist.fetch_build_eggs(dist.setup_requires) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/dist.py", line 717, in fetch_build_eggs replace_conflicting=True, File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/pkg_resources/__init__.py", line 782, in resolve replace_conflicting=replace_conflicting File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/pkg_resources/__init__.py", line 1065, in best_match return self.obtain(req, installer) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/pkg_resources/__init__.py", line 1077, in obtain return installer(requirement) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/dist.py", line 784, in fetch_build_egg return cmd.easy_install(req) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 679, in easy_install return self.install_item(spec, dist.location, tmpdir, deps) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 705, in install_item dists = self.install_eggs(spec, download, tmpdir) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 890, in install_eggs return self.build_and_install(setup_script, setup_base) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 1158, in build_and_install self.run_setup(setup_script, setup_base, args) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 1144, in run_setup run_setup(setup_script, args) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 253, in run_setup raise File "/home/docs/.pyenv/versions/3.7.3/lib/python3.7/contextlib.py", line 130, in __exit__ self.gen.throw(type, value, traceback) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 195, in setup_context yield File "/home/docs/.pyenv/versions/3.7.3/lib/python3.7/contextlib.py", line 130, in __exit__ self.gen.throw(type, value, traceback) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 166, in save_modules saved_exc.resume() File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 141, in resume six.reraise(type, exc, self._tb) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/_vendor/six.py", line 685, in reraise raise value.with_traceback(tb) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 154, in save_modules yield saved File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 195, in setup_context yield File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 250, in run_setup _execfile(setup_script, ns) File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 45, in _execfile exec(code, globals, locals) File "/tmp/easy_install-8o__04u4/cmake-3.16.3/setup.py", line 7, in import subprocess ModuleNotFoundError: No module named 'skbuild'