Read the Docs build information
Build id: 274410
Project: cyverse-leptin-rna-seq-lesson-dev
Version: latest
Commit: 3315ba381deb487583d76db7411ebd062473a82f
Date: 2020-01-08T20:56:58.821462Z
State: finished
Success: False


[rtd-command-info] start-time: 2020-01-08T21:04:15.979785Z, end-time: 2020-01-08T21:04:15.987773Z, duration: 0, exit-code: 0
git remote set-url origin https://github.com/JasonJWilliamsNY/leptin-rna-seq-lesson-dev.git


[rtd-command-info] start-time: 2020-01-08T21:04:16.068486Z, end-time: 2020-01-08T21:04:16.543433Z, duration: 0, exit-code: 0
git fetch origin --force --tags --prune --prune-tags --depth 50
From https://github.com/JasonJWilliamsNY/leptin-rna-seq-lesson-dev
   f10b435..3315ba3  master     -> origin/master

[rtd-command-info] start-time: 2020-01-08T21:04:16.751219Z, end-time: 2020-01-08T21:04:16.819399Z, duration: 0, exit-code: 0
git checkout --force origin/master
Previous HEAD position was f10b435 initial lesson draft
HEAD is now at 3315ba3 add requirements file

[rtd-command-info] start-time: 2020-01-08T21:04:16.900395Z, end-time: 2020-01-08T21:04:16.911273Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2020-01-08T21:04:17.891764Z, end-time: 2020-01-08T21:04:22.496424Z, duration: 4, exit-code: 0
python3.7 -mvirtualenv --no-site-packages --no-download 
Using base prefix '/home/docs/.pyenv/versions/3.7.3'
New python executable in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/bin/python3.7
Not overwriting existing python script /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/bin/python (you must use /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/bin/python3.7)
Installing setuptools, pip, wheel...
done.

[rtd-command-info] start-time: 2020-01-08T21:04:22.578189Z, end-time: 2020-01-08T21:04:23.421742Z, duration: 0, exit-code: 0
python -m pip install --upgrade --cache-dir /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/.cache/pip pip
Requirement already up-to-date: pip in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (19.3.1)

[rtd-command-info] start-time: 2020-01-08T21:04:23.502440Z, end-time: 2020-01-08T21:04:25.453530Z, duration: 1, exit-code: 0
python -m pip install --upgrade --cache-dir /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/.cache/pip Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<1.1
Requirement already up-to-date: Pygments==2.3.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (2.3.1)
Requirement already up-to-date: setuptools==41.0.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (41.0.1)
Requirement already up-to-date: docutils==0.14 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (0.14)
Requirement already up-to-date: mock==1.0.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (1.0.1)
Requirement already up-to-date: pillow==5.4.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (5.4.1)
Requirement already up-to-date: alabaster!=0.7.5,<0.8,>=0.7 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (0.7.12)
Requirement already up-to-date: commonmark==0.8.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (0.8.1)
Requirement already up-to-date: recommonmark==0.5.0 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (0.5.0)
Requirement already up-to-date: sphinx<2 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (1.8.5)
Requirement already up-to-date: sphinx-rtd-theme<0.5 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (0.4.3)
Requirement already up-to-date: readthedocs-sphinx-ext<1.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (1.0.1)
Requirement already satisfied, skipping upgrade: future in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from commonmark==0.8.1) (0.18.2)
Requirement already satisfied, skipping upgrade: babel!=2.0,>=1.3 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from sphinx<2) (2.8.0)
Requirement already satisfied, skipping upgrade: requests>=2.0.0 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from sphinx<2) (2.22.0)
Requirement already satisfied, skipping upgrade: six>=1.5 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from sphinx<2) (1.13.0)
Requirement already satisfied, skipping upgrade: sphinxcontrib-websupport in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from sphinx<2) (1.1.2)
Requirement already satisfied, skipping upgrade: imagesize in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from sphinx<2) (1.2.0)
Requirement already satisfied, skipping upgrade: packaging in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from sphinx<2) (20.0)
Requirement already satisfied, skipping upgrade: Jinja2>=2.3 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from sphinx<2) (2.10.3)
Requirement already satisfied, skipping upgrade: snowballstemmer>=1.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from sphinx<2) (2.0.0)
Requirement already satisfied, skipping upgrade: pytz>=2015.7 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from babel!=2.0,>=1.3->sphinx<2) (2019.3)
Requirement already satisfied, skipping upgrade: certifi>=2017.4.17 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from requests>=2.0.0->sphinx<2) (2019.11.28)
Requirement already satisfied, skipping upgrade: chardet<3.1.0,>=3.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from requests>=2.0.0->sphinx<2) (3.0.4)
Requirement already satisfied, skipping upgrade: urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from requests>=2.0.0->sphinx<2) (1.25.7)
Requirement already satisfied, skipping upgrade: idna<2.9,>=2.5 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from requests>=2.0.0->sphinx<2) (2.8)
Requirement already satisfied, skipping upgrade: pyparsing>=2.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from packaging->sphinx<2) (2.4.6)
Requirement already satisfied, skipping upgrade: MarkupSafe>=0.23 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/envs/latest/lib/python3.7/site-packages (from Jinja2>=2.3->sphinx<2) (1.1.1)

[rtd-command-info] start-time: 2020-01-08T21:04:25.537386Z, end-time: 2020-01-08T21:04:26.178265Z, duration: 0, exit-code: 1
python -m pip install --exists-action=w --cache-dir /home/docs/checkouts/readthedocs.org/user_builds/cyverse-leptin-rna-seq-lesson-dev/.cache/pip -r misc/requirements.txt
ERROR: Invalid requirement: 'pip install'