Read the Docs build information
Build id: 265612
Project: icb-scanpy
Version: 1.1
Commit: 9da09dd0dad28d35e6d114d4d76fbe8fdd727028
Date: 2019-12-04T10:22:04.949097Z
State: finished
Success: False


[rtd-command-info] start-time: 2019-12-04T10:22:05.411761Z, end-time: 2019-12-04T10:22:08.377369Z, duration: 2, exit-code: 0
git clone --no-single-branch --depth 50 https://github.com/theislab/scanpy.git .
Cloning into '.'...

[rtd-command-info] start-time: 2019-12-04T10:22:08.654207Z, end-time: 2019-12-04T10:22:08.688957Z, duration: 0, exit-code: 0
git checkout --force 9da09dd0dad28d35e6d114d4d76fbe8fdd727028
Note: checking out '9da09dd0dad28d35e6d114d4d76fbe8fdd727028'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by performing another checkout.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -b with the checkout command again. Example:

  git checkout -b <new-branch-name>

HEAD is now at 9da09dd version 1.1

[rtd-command-info] start-time: 2019-12-04T10:22:08.778900Z, end-time: 2019-12-04T10:22:08.793417Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2019-12-04T10:22:09.835579Z, end-time: 2019-12-04T10:22:14.841158Z, duration: 5, exit-code: 0
python3.6 -mvirtualenv --no-site-packages --no-download 
Using base prefix '/home/docs/.pyenv/versions/3.6.8'
New python executable in /home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/envs/1.1/bin/python3.6
Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/envs/1.1/bin/python
Installing setuptools, pip, wheel...
done.

[rtd-command-info] start-time: 2019-12-04T10:22:14.929727Z, end-time: 2019-12-04T10:22:17.623907Z, duration: 2, exit-code: 0
python -m pip install --upgrade --cache-dir /home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/.cache/pip pip
Collecting pip
  Using cached https://files.pythonhosted.org/packages/00/b6/9cfa56b4081ad13874b0c6f96af8ce16cfbc1cb06bedf8e9164ce5551ec1/pip-19.3.1-py2.py3-none-any.whl
Installing collected packages: pip
  Found existing installation: pip 19.1.1
    Uninstalling pip-19.1.1:
      Successfully uninstalled pip-19.1.1
Successfully installed pip-19.3.1

[rtd-command-info] start-time: 2019-12-04T10:22:17.699155Z, end-time: 2019-12-04T10:22:27.909995Z, duration: 10, exit-code: 0
python -m pip install --upgrade --cache-dir /home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/.cache/pip Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<1.1
Collecting Pygments==2.3.1
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Requirement already up-to-date: setuptools==41.0.1 in /home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/envs/1.1/lib/python3.6/site-packages (41.0.1)
Collecting docutils==0.14
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Processing /home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/.cache/pip/wheels/7e/72/92/744b532c779242b57aab4bcba80c312b30c069bbd60025e7e6/mock-1.0.1-cp36-none-any.whl
Collecting pillow==5.4.1
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Collecting alabaster!=0.7.5,<0.8,>=0.7
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Collecting commonmark==0.8.1
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Collecting recommonmark==0.5.0
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Collecting sphinx-rtd-theme<0.5
  Using cached https://files.pythonhosted.org/packages/60/b4/4df37087a1d36755e3a3bfd2a30263f358d2dea21938240fa02313d45f51/sphinx_rtd_theme-0.4.3-py2.py3-none-any.whl
Collecting readthedocs-sphinx-ext<1.1
  Using cached https://files.pythonhosted.org/packages/8a/b5/73b740dc7182b4f458de18ab54adaf5698ace3a723569c5e2a748130a314/readthedocs_sphinx_ext-1.0.1-py2.py3-none-any.whl
Processing /home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/.cache/pip/wheels/8b/99/a0/81daf51dcd359a9377b110a8a886b3895921802d2fc1b2397e/future-0.18.2-cp36-none-any.whl
Collecting six>=1.5
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Collecting babel!=2.0,>=1.3
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Collecting sphinxcontrib-websupport
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Collecting packaging
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Collecting imagesize
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Collecting snowballstemmer>=1.1
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Collecting requests>=2.0.0
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Collecting Jinja2>=2.3
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Collecting pytz>=2015.7
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Collecting pyparsing>=2.0.2
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Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1
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Collecting certifi>=2017.4.17
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Collecting MarkupSafe>=0.23
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Installing collected packages: Pygments, docutils, mock, pillow, alabaster, future, commonmark, six, pytz, babel, sphinxcontrib-websupport, pyparsing, packaging, imagesize, snowballstemmer, urllib3, chardet, idna, certifi, requests, MarkupSafe, Jinja2, sphinx, recommonmark, sphinx-rtd-theme, readthedocs-sphinx-ext
Successfully installed Jinja2-2.10.3 MarkupSafe-1.1.1 Pygments-2.3.1 alabaster-0.7.12 babel-2.7.0 certifi-2019.11.28 chardet-3.0.4 commonmark-0.8.1 docutils-0.14 future-0.18.2 idna-2.8 imagesize-1.1.0 mock-1.0.1 packaging-19.2 pillow-5.4.1 pyparsing-2.4.5 pytz-2019.3 readthedocs-sphinx-ext-1.0.1 recommonmark-0.5.0 requests-2.22.0 six-1.13.0 snowballstemmer-2.0.0 sphinx-1.8.5 sphinx-rtd-theme-0.4.3 sphinxcontrib-websupport-1.1.2 urllib3-1.25.7

[rtd-command-info] start-time: 2019-12-04T10:22:27.999694Z, end-time: 2019-12-04T10:22:28.871976Z, duration: 0, exit-code: 1
python -m pip install --exists-action=w --cache-dir /home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/.cache/pip -r docs/requirements.txt
ERROR: Could not open requirements file: [Errno 2] No such file or directory: 'docs/requirements.txt'