Read the Docs build information
Build id: 2641311
Project: institute-for-disease-modeling-emod-generic
Version: 4
Commit: 9ffda61e1b5168075bd64bebca06373199e6b1ca
Date: 2024-11-25T23:43:33.763019Z
State: finished
Success: True


[rtd-command-info] start-time: 2024-11-25T23:43:34.968732Z, end-time: 2024-11-25T23:44:25.652558Z, duration: 50, exit-code: 0
git clone --depth 1 https://github.com/EMOD-Hub/EMOD-Generic.git .
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[rtd-command-info] start-time: 2024-11-25T23:44:25.757318Z, end-time: 2024-11-25T23:44:30.555891Z, duration: 4, exit-code: 0
git fetch origin --force --prune --prune-tags --depth 50 pull/4/head:external-4
From https://github.com/EMOD-Hub/EMOD-Generic
 * [new ref]         refs/pull/4/head -> external-4

[rtd-command-info] start-time: 2024-11-25T23:44:30.707775Z, end-time: 2024-11-25T23:44:32.715086Z, duration: 2, exit-code: 0
git checkout --force 9ffda61e1b5168075bd64bebca06373199e6b1ca
Note: switching to '9ffda61e1b5168075bd64bebca06373199e6b1ca'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at 9ffda61 fixed path to requirements.txt file for docs setup

[rtd-command-info] start-time: 2024-11-25T23:44:32.809686Z, end-time: 2024-11-25T23:44:32.885915Z, duration: 0, exit-code: 0
cat .readthedocs.yml
# .readthedocs.yml
# Read the Docs configuration file
# See https://docs.readthedocs.io/en/stable/config-file/v2.html for details

# Required
version: 2

# Set the version of Python and other tools you might need
build:
  os: ubuntu-20.04
  tools:
    python: "3.9"

# Build documentation in the docs/ directory with Sphinx
sphinx:
  fail_on_warning: true

# Build documentation with MkDocs
#mkdocs:
#  configuration: mkdocs.yml

# Optionally build your docs in additional formats such as PDF
formats:
  - htmlzip

# Optionally set the version of Python and requirements required to build your docs
python:
  
  install:
    - requirements: docs/requirements.txt
        
# Optionally rank topics in search results, between -10 (lower) and 10 (higher).
# 0 is normal rank, not no rank

search:
  ranking:
    install-overview.html: 3
    model-overview.html: 3
    faq.html: 2
    parameter-overview.html: 2
    dev*: -5

[rtd-command-info] start-time: 2024-11-25T23:44:38.371136Z, end-time: 2024-11-25T23:44:38.464204Z, duration: 0, exit-code: 0
asdf global python 3.9.20


[rtd-command-info] start-time: 2024-11-25T23:44:38.875233Z, end-time: 2024-11-25T23:44:40.084744Z, duration: 1, exit-code: 0
python -mvirtualenv $READTHEDOCS_VIRTUALENV_PATH
created virtual environment CPython3.9.20.final.0-64 in 884ms
  creator CPython3Posix(dest=/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emod-generic/envs/4, clear=False, no_vcs_ignore=False, global=False)
  seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/docs/.local/share/virtualenv)
    added seed packages: pip==23.1, setuptools==67.6.1, wheel==0.40.0
  activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator

[rtd-command-info] start-time: 2024-11-25T23:44:40.188488Z, end-time: 2024-11-25T23:44:53.606246Z, duration: 13, exit-code: 0
python -m pip install --upgrade --no-cache-dir pip setuptools
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Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emod-generic/envs/4/lib/python3.9/site-packages (23.1)
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Collecting setuptools
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Installing collected packages: setuptools, pip
  Attempting uninstall: setuptools
    Found existing installation: setuptools 67.6.1
    Uninstalling setuptools-67.6.1:
      Successfully uninstalled setuptools-67.6.1
  Attempting uninstall: pip
    Found existing installation: pip 23.1
    Uninstalling pip-23.1:
      Successfully uninstalled pip-23.1
Successfully installed pip-24.3.1 setuptools-75.6.0

[rtd-command-info] start-time: 2024-11-25T23:44:53.679281Z, end-time: 2024-11-25T23:45:06.173383Z, duration: 12, exit-code: 0
python -m pip install --upgrade --no-cache-dir sphinx
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Collecting packaging>=23.0 (from sphinx)
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Collecting importlib-metadata>=6.0 (from sphinx)
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Collecting tomli>=2 (from sphinx)
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Collecting zipp>=3.20 (from importlib-metadata>=6.0->sphinx)
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Collecting MarkupSafe>=2.0 (from Jinja2>=3.1->sphinx)
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Collecting charset-normalizer<4,>=2 (from requests>=2.30.0->sphinx)
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Collecting idna<4,>=2.5 (from requests>=2.30.0->sphinx)
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Collecting urllib3<3,>=1.21.1 (from requests>=2.30.0->sphinx)
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Collecting certifi>=2017.4.17 (from requests>=2.30.0->sphinx)
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Installing collected packages: snowballstemmer, zipp, urllib3, tomli, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, Pygments, packaging, MarkupSafe, imagesize, idna, docutils, charset-normalizer, certifi, babel, alabaster, requests, Jinja2, importlib-metadata, sphinx
Successfully installed Jinja2-3.1.4 MarkupSafe-3.0.2 Pygments-2.18.0 alabaster-0.7.16 babel-2.16.0 certifi-2024.8.30 charset-normalizer-3.4.0 docutils-0.21.2 idna-3.10 imagesize-1.4.1 importlib-metadata-8.5.0 packaging-24.2 requests-2.32.3 snowballstemmer-2.2.0 sphinx-7.4.7 sphinxcontrib-applehelp-2.0.0 sphinxcontrib-devhelp-2.0.0 sphinxcontrib-htmlhelp-2.1.0 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-2.0.0 sphinxcontrib-serializinghtml-2.0.0 tomli-2.1.0 urllib3-2.2.3 zipp-3.21.0

[rtd-command-info] start-time: 2024-11-25T23:45:06.256546Z, end-time: 2024-11-25T23:45:34.644802Z, duration: 28, exit-code: 0
python -m pip install --exists-action=w --no-cache-dir -r docs/requirements.txt
Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/api/pypi/pypi-production/simple
Collecting sphinxext.remoteliteralinclude~=0.4.0 (from -r docs/requirements.txt (line 1))
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Installing collected packages: webencodings, wcwidth, pure-eval, ptyprocess, fastjsonschema, wrapt, websocket-client, webcolors, uri-template, typing-extensions, types-python-dateutil, traitlets, tornado, tinycss2, soupsieve, sniffio, six, send2trash, rpds-py, rfc3986-validator, readthedocs-sphinx-search, pyzmq, pyyaml, python-json-logger, pyjwt, pycparser, psutil, prompt-toolkit, prometheus-client, platformdirs, pexpect, parso, pandocfilters, overrides, nest-asyncio, mistune, mdurl, jupyterlab-pygments, jsonpointer, json5, fqdn, executing, exceptiongroup, docutils, defusedxml, decorator, debugpy, bleach, attrs, accessible-pygments, terminado, sphinxext.remoteliteralinclude, rfc3339-validator, referencing, python-dateutil, pockets, plantweb, matplotlib-inline, markdown-it-py, jupyter-core, jedi, deprecated, comm, cffi, beautifulsoup4, async-lru, asttokens, anyio, stack-data, sphinxcontrib-programoutput, sphinxcontrib-napoleon, sphinxcontrib-jquery, sphinx-copybutton, pynacl, pydata-sphinx-theme, mdit-py-plugins, jupyter-server-terminals, jupyter-client, jsonschema-specifications, cryptography, arrow, argon2-cffi-bindings, myst-parser, jsonschema, isoduration, ipython, argon2-cffi, pygithub, nbformat, ipykernel, nbclient, jupyter-events, nbconvert, nbsphinx, jupyter-server, notebook-shim, jupyterlab-server, jupyter-lsp, jupyterlab
  Attempting uninstall: docutils
    Found existing installation: docutils 0.21.2
    Uninstalling docutils-0.21.2:
      Successfully uninstalled docutils-0.21.2
Successfully installed accessible-pygments-0.0.5 anyio-4.6.2.post1 argon2-cffi-23.1.0 argon2-cffi-bindings-21.2.0 arrow-1.3.0 asttokens-2.4.1 async-lru-2.0.4 attrs-24.2.0 beautifulsoup4-4.12.3 bleach-6.2.0 cffi-1.17.1 comm-0.2.2 cryptography-43.0.3 debugpy-1.8.9 decorator-5.1.1 defusedxml-0.7.1 deprecated-1.2.15 docutils-0.20.1 exceptiongroup-1.2.2 executing-2.1.0 fastjsonschema-2.20.0 fqdn-1.5.1 ipykernel-6.29.5 ipython-8.18.1 isoduration-20.11.0 jedi-0.19.2 json5-0.9.28 jsonpointer-3.0.0 jsonschema-4.23.0 jsonschema-specifications-2024.10.1 jupyter-client-8.6.3 jupyter-core-5.7.2 jupyter-events-0.10.0 jupyter-lsp-2.2.5 jupyter-server-2.14.2 jupyter-server-terminals-0.5.3 jupyterlab-4.0.13 jupyterlab-pygments-0.3.0 jupyterlab-server-2.27.3 markdown-it-py-3.0.0 matplotlib-inline-0.1.7 mdit-py-plugins-0.4.2 mdurl-0.1.2 mistune-3.0.2 myst-parser-2.0.0 nbclient-0.10.0 nbconvert-7.16.4 nbformat-5.10.4 nbsphinx-0.9.5 nest-asyncio-1.6.0 notebook-shim-0.2.4 overrides-7.7.0 pandocfilters-1.5.1 parso-0.8.4 pexpect-4.9.0 plantweb-1.2.1 platformdirs-4.3.6 pockets-0.9.1 prometheus-client-0.21.0 prompt-toolkit-3.0.48 psutil-6.1.0 ptyprocess-0.7.0 pure-eval-0.2.3 pycparser-2.22 pydata-sphinx-theme-0.16.0 pygithub-1.59.1 pyjwt-2.10.0 pynacl-1.5.0 python-dateutil-2.9.0.post0 python-json-logger-2.0.7 pyyaml-6.0.2 pyzmq-26.2.0 readthedocs-sphinx-search-0.3.2 referencing-0.35.1 rfc3339-validator-0.1.4 rfc3986-validator-0.1.1 rpds-py-0.21.0 send2trash-1.8.3 six-1.16.0 sniffio-1.3.1 soupsieve-2.6 sphinx-copybutton-0.5.2 sphinxcontrib-jquery-4.1 sphinxcontrib-napoleon-0.7 sphinxcontrib-programoutput-0.17 sphinxext.remoteliteralinclude-0.4.0 stack-data-0.6.3 terminado-0.18.1 tinycss2-1.4.0 tornado-6.4.2 traitlets-5.14.3 types-python-dateutil-2.9.0.20241003 typing-extensions-4.12.2 uri-template-1.3.0 wcwidth-0.2.13 webcolors-24.11.1 webencodings-0.5.1 websocket-client-1.8.0 wrapt-1.17.0

[rtd-command-info] start-time: 2024-11-25T23:45:34.878042Z, end-time: 2024-11-25T23:45:34.935919Z, duration: 0, exit-code: 0
cat docs/conf.py
# -*- coding: utf-8 -*-
#
# Sphinx Demo docs build configuration file, created by
# sphinx-quickstart on Fri Aug 26 16:52:16 2016.
#
# This file is execfile()d with the current directory set to its
# containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All configuration values have a default; values that are commented out
# serve to show the default.

# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# docs root, use os.path.abspath to make it absolute, like shown here.
#
import os
import subprocess
import sys
#import sphinx_rtd_theme
import configparser
from datetime import datetime
from urllib.request import urlretrieve


# -- General configuration ------------------------------------------------

tags.add('generic')

# If your docs needs a minimal Sphinx version, state it here.
#
# needs_sphinx = '1.0'

# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
    'sphinx.ext.mathjax',
    'sphinx.ext.githubpages',
    'sphinx.ext.todo',
    'plantweb.directive',
    'sphinxcontrib.programoutput',
    'sphinx_copybutton',
    'sphinx.ext.intersphinx',
    'sphinxext.remoteliteralinclude',
    'myst_parser',
    'sphinx_search.extension',
    'sphinx.ext.viewcode', # link to view source code
    'myst_parser', # source files written in MD or RST
]

myst_enable_extensions = [
    "amsmath",
    "attrs_inline",
    "colon_fence",
    "deflist",
    "dollarmath",
    "fieldlist",
    "html_admonition",
    "html_image",
    "linkify",
    "replacements",
    "smartquotes",
    "strikethrough",
    "substitution",
    "tasklist",
]

plantuml = 'plantweb'

#autodoc_default_options = {
#    'member-order': 'bysource',
#    'members': None,
#    'exclude-members': '__all__'
#}

#autodoc_mock_imports = []

#napoleon_google_docstring = True
# napoleon_numpy_docstring = True

# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']

# The suffix(es) of source filenames.
# You can specify multiple suffix as a list of string:
#
source_suffix = ['.rst', '.md']

# The encoding of source files.
#
# source_encoding = 'utf-8-sig'

# The master toctree document.
master_doc = 'index'

# General information about the project.
project = u'emodpy-malaria'
copyright = f'1999 - {datetime.today().year}, Bill & Melinda Gates Foundation. All rights reserved.'
author = u'Institute for Disease Modeling'

# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The short X.Y version.
#current_path = os.path.dirname(__file__)
#version_path = os.path.join(current_path, '..', '.bumpversion.cfg')
#config = configparser.ConfigParser()
#config.read(version_path)

#version = config['bumpversion']['current_version']
# The full version, including alpha/beta/rc tags.
# release = u'1.0'

# The language for content autogenerated by Sphinx. Refer to docs
# for a list of supported languages.
#
# This is also used if you do content translation via gettext catalogs.
# Usually you set "language" from the command line for these cases.
language = 'en'

# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
#
# today = ''
#
# Else, today_fmt is used as the format for a strftime call.
#
# today_fmt = '%B %d, %Y'

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
# This patterns also effect to html_static_path and html_extra_path
exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store']

# The reST default role (used for this markup: `text`) to use for all
# documents.
#
# default_role = None

# If true, '()' will be appended to :func: etc. cross-reference text.
#
# add_function_parentheses = True

# If true, the current module name will be prepended to all description
# unit titles (such as .. function::).
#
# add_module_names = True

# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
#
# show_authors = False

# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'

# A list of ignored prefixes for module index sorting.
# modindex_common_prefix = []

# If true, keep warnings as "system message" paragraphs in the built documents.
# keep_warnings = False

# If true, `todo` and `todoList` produce output, else they produce nothing.
todo_include_todos = False

# RST epilog is added to the end of every topic. Useful for replace
# directives to use across the docset.

rst_epilog = "\n.. include:: /variables.txt"

# -- Options for HTML output ----------------------------------------------

# The theme to use for HTML and HTML Help pages.  See the docs for
# a list of builtin themes.
#
html_theme = 'pydata_sphinx_theme'

# Theme options are theme-specific and customize the look and feel of a theme
# further.  For a list of options available for each theme, see the
# docs.
# #
html_theme_options = {
    "collapse_navigation": False,
    "navigation_depth": 3,
    "show_prev_next": True,
    "icon_links": [
        {"name": "IDM docs", "url": "https://docs.idmod.org", "icon": "fas fa-home"},
        {
            "name": "GitHub",
            "url": "https://github.com/institutefordiseasemodeling/emodpy-malaria",
            "icon": "fab fa-github-square",
        },
    ],
    "navbar_end": ["theme-switcher", "navbar-icon-links"],
    "secondary_sidebar_items": ["navbar-side"],
    "header_links_before_dropdown": 5,
    "footer_start": ["copyright", "footer_start"],
    "footer_end": ["theme-version", "footer_end"],
}
html_sidebars = {
    "**": ["sidebar-nav-bs", "page-toc"],
}
html_logo = "images/idm-logo-transparent.png"
html_favicon = "images/favicon.ico"
html_static_path = ['_static']
html_baseurl = "https://docs.idmod.org/projects/emodpy-malaria/en/latest"
html_context = {
    'rtd_url': 'https://docs.idmod.org/projects/emodpy-malaria/en/latest',
    "versions_dropdown": {
        "latest": "devel (latest)",
        "stable": "current (stable)",
    },
    "default_mode": "light",
}

# Add customizations
def setup(app):
    app.add_css_file("theme_overrides.css")

# Add any paths that contain custom themes here, relative to this directory.
#html_theme_path = [sphinx_rtd_theme.get_html_theme_path()]

# The name for this set of Sphinx documents.
# "<project> v<release> docs" by default.
#
# html_title = u'Sphinx Demo v1.0'

# A shorter title for the navigation bar.  Default is the same as html_title.
#
# html_short_title = None

# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
#
#html_logo = "images/IDM_white.png"

# The name of an image file (relative to this directory) to use as a favicon of
# the docs.  This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
#
html_favicon = "images/favicon.ico"

# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".

html_static_path = ['_static']

html_css_files = ['theme_overrides.css']

html_js_files = ['show_block_by_os.js'] 

# Add any extra paths that contain custom files (such as robots.txt or
# .htaccess) here, relative to this directory. These files are copied
# directly to the root of the docs.
#
# html_extra_path = []

# If not None, a 'Last updated on:' timestamp is inserted at every page
# bottom, using the given strftime format.
# The empty string is equivalent to '%b %d, %Y'.
#
# html_last_updated_fmt = None

# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
#
# html_use_smartypants = True

# Custom sidebar templates, maps document names to template names.
#
# html_sidebars = {}

# Additional templates that should be rendered to pages, maps page names to
# template names.
#
# html_additional_pages = {}

# If false, no module index is generated.
#
# html_domain_indices = True

# If false, no index is generated.
#
# html_use_index = True

# If true, the index is split into individual pages for each letter.
#
# html_split_index = False

# If true, links to the reST sources are added to the pages.
#
html_show_sourcelink = False

# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
#
html_show_sphinx = False

# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
#
# html_show_copyright = True

# -- RTD Sphinx search for searching across the entire domain -------------

if os.environ.get('READTHEDOCS') == 'True':

    search_project_parent = "institute-for-disease-modeling-idm"
    search_project = os.environ["READTHEDOCS_PROJECT"]
    search_version = os.environ["READTHEDOCS_VERSION"]

    rtd_sphinx_search_default_filter = f"subprojects:{search_project}/{search_version}"

    rtd_sphinx_search_filters = {
        "Search this project": f"project:{search_project}/{search_version}",
        "Search all IDM docs": f"subprojects:{search_project_parent}/{search_version}",
    }

# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it.  The value of this option must be the
# base URL from which the finished HTML is served.
#
html_use_opensearch = 'www.idmod.org/docs/'

# This is the file name suffix for HTML files (e.g. ".xhtml").
# html_file_suffix = None

# Language to be used for generating the HTML full-text search index.
# Sphinx supports the following languages:
#   'da', 'de', 'en', 'es', 'fi', 'fr', 'hu', 'it', 'ja'
#   'nl', 'no', 'pt', 'ro', 'ru', 'sv', 'tr', 'zh'
#
# html_search_language = 'en'

# A dictionary with options for the search language support, empty by default.
# 'ja' uses this config value.
# 'zh' user can custom change `jieba` dictionary path.
#
# html_search_options = {'type': 'default'}

# The name of a javascript file (relative to the configuration directory) that
# implements a search results scorer. If empty, the default will be used.
#
# html_search_scorer = 'scorer.js'

# Output file base name for HTML help builder.
htmlhelp_basename = 'emodpy-malaria'

# -- Options for LaTeX output ---------------------------------------------

latex_elements = {
    # The paper size ('letterpaper' or 'a4paper').
    #
    # 'papersize': 'letterpaper',

    # The font size ('10pt', '11pt' or '12pt').
    #
    # 'pointsize': '10pt',

    # Additional stuff for the LaTeX preamble.
    #
    # 'preamble': '',

    # Latex figure (float) alignment
    #
    # 'figure_align': 'htbp',
}

# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title,
#  author, documentclass [howto, manual, or own class]).
latex_documents = [
    (master_doc, 'emodpy-malaria-docs.tex', u'emodpy-malaria',
     u'Institute for Disease Modeling', 'manual'),
]

# The name of an image file (relative to this directory) to place at the top of
# the title page.
#
# latex_logo = None

# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
#
# latex_use_parts = False

# If true, show page references after internal links.
#
# latex_show_pagerefs = False

# If true, show URL addresses after external links.
#
# latex_show_urls = False

# Documents to append as an appendix to all manuals.
#
# latex_appendices = []

# It false, will not define \strong, \code,     itleref, \crossref ... but only
# \sphinxstrong, ..., \sphinxtitleref, ... To help avoid clash with user added
# packages.
#
# latex_keep_old_macro_names = True

# If false, no module index is generated.
#
# latex_domain_indices = True


# -- Options for manual page output ---------------------------------------

# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [
    (master_doc, 'emodpy-malaria-docs', u'emodpy-malaria',
     [author], 1)
]

# If true, show URL addresses after external links.
#
man_show_urls = True

# -- Options for Texinfo output -------------------------------------------

# Grouping the document tree into Texinfo files. List of tuples
# (source start file, target name, title, author,
#  dir menu entry, description, category)
texinfo_documents = [
    (master_doc, 'emodpy-malaria-docs', u'emodpy-malaria',
     author, 'Institute for Disease Modeling', 'How to use emodpy for malaria simulations.',
     'Miscellaneous'),
]

# Documents to append as an appendix to all manuals.
#
# texinfo_appendices = []

# If false, no module index is generated.
#
# texinfo_domain_indices = True

# How to display URL addresses: 'footnote', 'no', or 'inline'.
#
# texinfo_show_urls = 'footnote'

# If true, do not generate a @detailmenu in the "Top" node's menu.
#
# texinfo_no_detailmenu = False


# Example configuration for intersphinx: refer to the Python standard library.

intersphinx_mapping = {'python': ('https://docs.python.org/3', None),
                       'emod_api': ('https://docs.idmod.org/projects/emod-api/en/latest/', None),
                       'emodpy': ('https://docs.idmod.org/projects/emodpy/en/latest/', None),
                       'idmtools': ('https://docs.idmod.org/projects/idmtools/en/latest/', None),
                       'pycomps': ('https://docs.idmod.org/projects/pycomps/en/latest/', None),
                       'emod': ('https://docs.idmod.org/projects/emod/en/latest/', None)
                       }

[rtd-command-info] start-time: 2024-11-25T23:45:35.020771Z, end-time: 2024-11-25T23:46:01.534844Z, duration: 26, exit-code: 0
python -m sphinx -T -W --keep-going -b html -d _build/doctrees -D language=en . $READTHEDOCS_OUTPUT/html
Running Sphinx v7.4.7
loading translations [en]... done
making output directory... done
Converting `source_suffix = ['.rst', '.md']` to `source_suffix = {'.rst': 'restructuredtext', '.md': 'restructuredtext'}`.
loading intersphinx inventory 'python' from https://docs.python.org/3/objects.inv...
loading intersphinx inventory 'emod_api' from https://docs.idmod.org/projects/emod-api/en/latest/objects.inv...
loading intersphinx inventory 'emodpy' from https://docs.idmod.org/projects/emodpy/en/latest/objects.inv...
loading intersphinx inventory 'idmtools' from https://docs.idmod.org/projects/idmtools/en/latest/objects.inv...
loading intersphinx inventory 'pycomps' from https://docs.idmod.org/projects/pycomps/en/latest/objects.inv...
loading intersphinx inventory 'emod' from https://docs.idmod.org/projects/emod/en/latest/objects.inv...
myst v2.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions={'replacements', 'linkify', 'attrs_inline', 'tasklist', 'deflist', 'amsmath', 'fieldlist', 'colon_fence', 'dollarmath', 'strikethrough', 'html_admonition', 'html_image', 'smartquotes', 'substitution'}, disable_syntax=[], all_links_external=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=0, heading_slug_func=None, html_meta={}, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True)
building [mo]: targets for 0 po files that are out of date
writing output... 
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build succeeded.

The HTML pages are in ../_readthedocs/html.