Read the Docs build information Build id: 254778 Project: cyverse-data-store-quickstart Version: latest Commit: 6ccb4875a70606371d9a854dc09860d4a5b86cf9 Date: 2019-10-30T18:24:52.882357Z State: finished Success: False [rtd-command-info] start-time: 2019-10-30T18:25:39.935983Z, end-time: 2019-10-30T18:25:39.954501Z, duration: 0, exit-code: 0 git remote set-url origin https://github.com/CyVerse-learning-materials/Data-store-quickstart.git [rtd-command-info] start-time: 2019-10-30T18:25:40.087273Z, end-time: 2019-10-30T18:25:40.631444Z, duration: 0, exit-code: 0 git fetch origin --force --tags --prune --prune-tags --depth 50 From https://github.com/CyVerse-learning-materials/Data-store-quickstart a8af757..6ccb487 master -> origin/master [rtd-command-info] start-time: 2019-10-30T18:25:41.021921Z, end-time: 2019-10-30T18:25:41.043429Z, duration: 0, exit-code: 0 git checkout --force origin/master Previous HEAD position was a8af757 Update index.rst HEAD is now at 6ccb487 Update conf.py [rtd-command-info] start-time: 2019-10-30T18:25:41.128278Z, end-time: 2019-10-30T18:25:41.155528Z, duration: 0, exit-code: 0 git clean -d -f -f Removing _build/ Removing misc/__pycache__/ [rtd-command-info] start-time: 2019-10-30T18:25:42.739140Z, end-time: 2019-10-30T18:25:48.260672Z, duration: 5, exit-code: 0 python3.7 -mvirtualenv --no-site-packages --no-download Using base prefix '/home/docs/.pyenv/versions/3.7.3' New python executable in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/bin/python3.7 Not overwriting existing python script /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/bin/python (you must use /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/bin/python3.7) Installing setuptools, pip, wheel... done. [rtd-command-info] start-time: 2019-10-30T18:25:48.361941Z, end-time: 2019-10-30T18:25:49.532497Z, duration: 1, exit-code: 0 python -m pip install --upgrade --cache-dir /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/.cache/pip pip Requirement already up-to-date: pip in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (19.3.1) [rtd-command-info] start-time: 2019-10-30T18:25:49.638046Z, end-time: 2019-10-30T18:25:52.105442Z, duration: 2, exit-code: 0 python -m pip install --upgrade --cache-dir /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/.cache/pip Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<1.1 Requirement already up-to-date: Pygments==2.3.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (2.3.1) Requirement already up-to-date: setuptools==41.0.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (41.0.1) Requirement already up-to-date: docutils==0.14 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (0.14) Requirement already up-to-date: mock==1.0.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (1.0.1) Requirement already up-to-date: pillow==5.4.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (5.4.1) Requirement already up-to-date: alabaster!=0.7.5,<0.8,>=0.7 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (0.7.12) Requirement already up-to-date: commonmark==0.8.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (0.8.1) Requirement already up-to-date: recommonmark==0.5.0 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (0.5.0) Requirement already up-to-date: sphinx<2 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (1.8.5) Requirement already up-to-date: sphinx-rtd-theme<0.5 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (0.4.3) Requirement already up-to-date: readthedocs-sphinx-ext<1.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (1.0.0) Requirement already satisfied, skipping upgrade: future in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from commonmark==0.8.1) (0.18.1) Requirement already satisfied, skipping upgrade: packaging in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from sphinx<2) (19.2) Requirement already satisfied, skipping upgrade: sphinxcontrib-websupport in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from sphinx<2) (1.1.2) Requirement already satisfied, skipping upgrade: Jinja2>=2.3 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from sphinx<2) (2.10.3) Requirement already satisfied, skipping upgrade: requests>=2.0.0 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from sphinx<2) (2.22.0) Requirement already satisfied, skipping upgrade: six>=1.5 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from sphinx<2) (1.12.0) Requirement already satisfied, skipping upgrade: babel!=2.0,>=1.3 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from sphinx<2) (2.7.0) Requirement already satisfied, skipping upgrade: snowballstemmer>=1.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from sphinx<2) (2.0.0) Requirement already satisfied, skipping upgrade: imagesize in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from sphinx<2) (1.1.0) Requirement already satisfied, skipping upgrade: pyparsing>=2.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from packaging->sphinx<2) (2.4.2) Requirement already satisfied, skipping upgrade: MarkupSafe>=0.23 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from Jinja2>=2.3->sphinx<2) (1.1.1) Requirement already satisfied, skipping upgrade: chardet<3.1.0,>=3.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from requests>=2.0.0->sphinx<2) (3.0.4) Requirement already satisfied, skipping upgrade: urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from requests>=2.0.0->sphinx<2) (1.25.6) Requirement already satisfied, skipping upgrade: certifi>=2017.4.17 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from requests>=2.0.0->sphinx<2) (2019.9.11) Requirement already satisfied, skipping upgrade: idna<2.9,>=2.5 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from requests>=2.0.0->sphinx<2) (2.8) Requirement already satisfied, skipping upgrade: pytz>=2015.7 in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages (from babel!=2.0,>=1.3->sphinx<2) (2019.3) [rtd-command-info] start-time: 2019-10-30T18:25:53.044381Z, end-time: 2019-10-30T18:25:53.593307Z, duration: 0, exit-code: 0 cat conf.py #!/usr/bin/env python3 # -*- coding: utf-8 -*- # # General information about the project. import sys import os sys.path.insert(0, os.path.dirname(__file__)) from misc.cyverse_sphinx_conf import * # noqa project = 'Data Store Quick Start' copyright = '2019, CyVerse' author = 'Eric Lyons' version = '1.0' release = '1.0' epub_title = CyVerse_Data_Store epub_author = Eric Lyons epub_publisher = CyVerse epub_copyright = copyright 2019 ########################################################################### # auto-created readthedocs.org specific configuration # ########################################################################### # # The following code was added during an automated build on readthedocs.org # It is auto created and injected for every build. The result is based on the # conf.py.tmpl file found in the readthedocs.org codebase: # https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl # import importlib import sys import os.path from six import string_types from sphinx import version_info # Get suffix for proper linking to GitHub # This is deprecated in Sphinx 1.3+, # as each page can have its own suffix if globals().get('source_suffix', False): if isinstance(source_suffix, string_types): SUFFIX = source_suffix elif isinstance(source_suffix, (list, tuple)): # Sphinx >= 1.3 supports list/tuple to define multiple suffixes SUFFIX = source_suffix[0] elif isinstance(source_suffix, dict): # Sphinx >= 1.8 supports a mapping dictionary for multiple suffixes SUFFIX = list(source_suffix.keys())[0] # make a ``list()`` for py2/py3 compatibility else: # default to .rst SUFFIX = '.rst' else: SUFFIX = '.rst' # Add RTD Static Path. Add to the end because it overwrites previous files. if not 'html_static_path' in globals(): html_static_path = [] if os.path.exists('_static'): html_static_path.append('_static') # Add RTD Theme only if they aren't overriding it already using_rtd_theme = ( ( 'html_theme' in globals() and html_theme in ['default'] and # Allow people to bail with a hack of having an html_style 'html_style' not in globals() ) or 'html_theme' not in globals() ) if using_rtd_theme: theme = importlib.import_module('sphinx_rtd_theme') html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(theme.get_html_theme_path()) else: html_theme_path = [theme.get_html_theme_path()] if globals().get('websupport2_base_url', False): websupport2_base_url = 'https://readthedocs.com/websupport' websupport2_static_url = 'https://media.readthedocs.com/' #Add project information to the template context. context = { 'using_theme': using_rtd_theme, 'html_theme': html_theme, 'current_version': "latest", 'version_slug': "latest", 'MEDIA_URL': "https://media.readthedocs.com/media/", 'STATIC_URL': "https://media.readthedocs.com/", 'PRODUCTION_DOMAIN': "readthedocs.com", 'versions': [ ("latest", "/en/latest/"), ], 'downloads': [ ("pdf", "//readthedocs.com/projects/cyverse-data-store-quickstart/downloads/pdf/latest/"), ("html", "//readthedocs.com/projects/cyverse-data-store-quickstart/downloads/htmlzip/latest/"), ("epub", "//readthedocs.com/projects/cyverse-data-store-quickstart/downloads/epub/latest/"), ], 'subprojects': [ ], 'slug': 'cyverse-data-store-quickstart', 'name': u'Data-store-quickstart', 'rtd_language': u'en', 'programming_language': u'words', 'canonical_url': 'https://cyverse-data-store-quickstart.readthedocs-hosted.com/en/latest/', 'analytics_code': 'None', 'single_version': False, 'conf_py_path': '/', 'api_host': 'https://readthedocs.com', 'github_user': 'CyVerse-learning-materials', 'github_repo': 'Data-store-quickstart', 'github_version': 'master', 'display_github': True, 'bitbucket_user': 'None', 'bitbucket_repo': 'None', 'bitbucket_version': 'master', 'display_bitbucket': False, 'gitlab_user': 'None', 'gitlab_repo': 'None', 'gitlab_version': 'master', 'display_gitlab': False, 'READTHEDOCS': True, 'using_theme': (html_theme == "default"), 'new_theme': (html_theme == "sphinx_rtd_theme"), 'source_suffix': SUFFIX, 'ad_free': False, 'user_analytics_code': '', 'global_analytics_code': 'UA-17997319-2', 'commit': '6ccb4875', } if 'html_context' in globals(): html_context.update(context) else: html_context = context # Add custom RTD extension if 'extensions' in globals(): # Insert at the beginning because it can interfere # with other extensions. # See https://github.com/rtfd/readthedocs.org/pull/4054 extensions.insert(0, "readthedocs_ext.readthedocs") else: extensions = ["readthedocs_ext.readthedocs"] # Add External version warning banner to the external version documentation if 'branch' == 'external': extensions.insert(1, "readthedocs_ext.external_version_warning") project_language = 'en' # User's Sphinx configurations language_user = globals().get('language', None) latex_engine_user = globals().get('latex_engine', None) latex_elements_user = globals().get('latex_elements', None) # Remove this once xindy gets installed in Docker image and XINDYOPS # env variable is supported # https://github.com/rtfd/readthedocs-docker-images/pull/98 latex_use_xindy = False chinese = any([ language_user in ('zh_CN', 'zh_TW'), project_language in ('zh_CN', 'zh_TW'), ]) japanese = any([ language_user == 'ja', project_language == 'ja', ]) if chinese: latex_engine = latex_engine_user or 'xelatex' latex_elements_rtd = { 'preamble': '\\usepackage[UTF8]{ctex}\n', } latex_elements = latex_elements_user or latex_elements_rtd elif japanese: latex_engine = latex_engine_user or 'platex' [rtd-command-info] start-time: 2019-10-30T18:25:53.674719Z, end-time: 2019-10-30T18:25:55.561897Z, duration: 1, exit-code: 2 python sphinx-build -T -E -b readthedocs -d _build/doctrees-readthedocs -D language=en . _build/html Running Sphinx v1.8.5 Traceback (most recent call last): File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages/sphinx/util/pycompat.py", line 141, in execfile_ code = compile(source, filepath_enc, 'exec') File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/checkouts/latest/conf.py", line 19 epub_author = Eric Lyons ^ SyntaxError: invalid syntax During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages/sphinx/util/pycompat.py", line 73, in convert_with_2to3 tree = refactoring_tool.refactor_string(source, 'conf.py') File "/home/docs/.pyenv/versions/3.7.3/lib/python3.7/lib2to3/refactor.py", line 361, in refactor_string name, err.__class__.__name__, err) File "/home/docs/.pyenv/versions/3.7.3/lib/python3.7/lib2to3/refactor.py", line 358, in refactor_string tree = self.driver.parse_string(data) File "/home/docs/.pyenv/versions/3.7.3/lib/python3.7/lib2to3/pgen2/driver.py", line 104, in parse_string return self.parse_tokens(tokens, debug) File "/home/docs/.pyenv/versions/3.7.3/lib/python3.7/lib2to3/pgen2/driver.py", line 72, in parse_tokens if p.addtoken(type, value, (prefix, start)): File "/home/docs/.pyenv/versions/3.7.3/lib/python3.7/lib2to3/pgen2/parse.py", line 159, in addtoken raise ParseError("bad input", type, value, context) lib2to3.pgen2.parse.ParseError: bad input: type=1, value='Lyons', context=(' ', (19, 19)) During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages/sphinx/config.py", line 368, in eval_config_file execfile_(filename, namespace) File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages/sphinx/util/pycompat.py", line 146, in execfile_ source = convert_with_2to3(filepath) File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages/sphinx/util/pycompat.py", line 78, in convert_with_2to3 raise SyntaxError(err.msg, (filepath, lineno, offset, err.value)) File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/checkouts/latest/conf.py", line 19 Lyons ^ SyntaxError: bad input During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages/sphinx/cmd/build.py", line 303, in build_main args.tags, args.verbosity, args.jobs, args.keep_going) File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages/sphinx/application.py", line 201, in __init__ self.config = Config.read(self.confdir, confoverrides or {}, self.tags) File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages/sphinx/config.py", line 203, in read namespace = eval_config_file(filename, tags) File "/home/docs/checkouts/readthedocs.org/user_builds/cyverse-data-store-quickstart/envs/latest/lib/python3.7/site-packages/sphinx/config.py", line 373, in eval_config_file raise ConfigError(msg % err) sphinx.errors.ConfigError: There is a syntax error in your configuration file: bad input (conf.py, line 19) Did you change the syntax from 2.x to 3.x? Configuration error: There is a syntax error in your configuration file: bad input (conf.py, line 19) Did you change the syntax from 2.x to 3.x?