Read the Docs build information
Build id: 2331128
Project: icb-anndata
Version: 1247
Commit: b58897e7dc8386623f73c8ae4646bc731a2207d0
Date: 2024-07-05T13:31:20.160683Z
State: cancelled
Success: False


[rtd-command-info] start-time: 2024-07-05T13:31:21.358595Z, end-time: 2024-07-05T13:31:21.890678Z, duration: 0, exit-code: 0
git clone --depth 1 https://github.com/scverse/anndata.git .
Cloning into '.'...

[rtd-command-info] start-time: 2024-07-05T13:31:21.952780Z, end-time: 2024-07-05T13:31:22.542806Z, duration: 0, exit-code: 0
git fetch origin --force --prune --prune-tags --depth 50 pull/1247/head:external-1247
From https://github.com/scverse/anndata
 * [new ref]         refs/pull/1247/head -> external-1247

[rtd-command-info] start-time: 2024-07-05T13:31:22.667252Z, end-time: 2024-07-05T13:31:22.748010Z, duration: 0, exit-code: 0
git checkout --force b58897e7dc8386623f73c8ae4646bc731a2207d0
Note: switching to 'b58897e7dc8386623f73c8ae4646bc731a2207d0'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at b58897e (fix): `dims`->`sizes`

[rtd-command-info] start-time: 2024-07-05T13:31:22.809236Z, end-time: 2024-07-05T13:31:22.873311Z, duration: 0, exit-code: 0
cat .readthedocs.yml
version: 2
build:
  os: ubuntu-20.04
  tools:
    python: "3.12"
sphinx:
  configuration: docs/conf.py
  fail_on_warning: true # do not change or you will be fired
python:
  install:
    - method: pip
      path: .
      extra_requirements:
        - doc
submodules:
  include:
    - "docs/tutorials/notebooks"
  recursive: true

[rtd-command-info] start-time: 2024-07-05T13:31:23.010389Z, end-time: 2024-07-05T13:31:23.097249Z, duration: 0, exit-code: 0
git submodule sync


[rtd-command-info] start-time: 2024-07-05T13:31:23.158564Z, end-time: 2024-07-05T13:31:23.761691Z, duration: 0, exit-code: 0
git submodule update --init --force --recursive -- docs/tutorials/notebooks
Submodule 'docs/tutorials/notebooks' (https://github.com/scverse/anndata-tutorials) registered for path 'docs/tutorials/notebooks'
Cloning into '/home/docs/checkouts/readthedocs.org/user_builds/icb-anndata/checkouts/1247/docs/tutorials/notebooks'...
Submodule path 'docs/tutorials/notebooks': checked out '9e186c5c694793bb04ea1397721d154d6e0b7069'

[rtd-command-info] start-time: 2024-07-05T13:31:30.173682Z, end-time: 2024-07-05T13:31:30.252931Z, duration: 0, exit-code: 0
asdf global python 3.12.3


[rtd-command-info] start-time: 2024-07-05T13:31:30.648286Z, end-time: 2024-07-05T13:31:31.817925Z, duration: 1, exit-code: 0
python -mvirtualenv $READTHEDOCS_VIRTUALENV_PATH
created virtual environment CPython3.12.3.final.0-64 in 836ms
  creator CPython3Posix(dest=/home/docs/checkouts/readthedocs.org/user_builds/icb-anndata/envs/1247, clear=False, no_vcs_ignore=False, global=False)
  seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/docs/.local/share/virtualenv)
    added seed packages: pip==23.1, setuptools==67.6.1, wheel==0.40.0
  activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator

[rtd-command-info] start-time: 2024-07-05T13:31:31.887016Z, end-time: 2024-07-05T13:31:45.330360Z, duration: 13, exit-code: 0
python -m pip install --upgrade --no-cache-dir pip setuptools
Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/icb-anndata/envs/1247/lib/python3.12/site-packages (23.1)
Collecting pip
  Downloading pip-24.1.1-py3-none-any.whl (1.8 MB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.8/1.8 MB 43.4 MB/s eta 0:00:00
Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/icb-anndata/envs/1247/lib/python3.12/site-packages (67.6.1)
Collecting setuptools
  Downloading setuptools-70.2.0-py3-none-any.whl (930 kB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 930.8/930.8 kB 156.5 MB/s eta 0:00:00
Installing collected packages: setuptools, pip
  Attempting uninstall: setuptools
    Found existing installation: setuptools 67.6.1
    Uninstalling setuptools-67.6.1:
      Successfully uninstalled setuptools-67.6.1
  Attempting uninstall: pip
    Found existing installation: pip 23.1
    Uninstalling pip-23.1:
      Successfully uninstalled pip-23.1
Successfully installed pip-24.1.1 setuptools-70.2.0