Read the Docs build information
Build id: 2252817
Project: icb-scanpy
Version: 3079
Commit: 0a23d83e1aca5814f9ed884731198aee7524f139
Date: 2024-05-31T14:46:46.890909Z
State: cancelled
Success: False


[rtd-command-info] start-time: 2024-05-31T14:47:18.573106Z, end-time: 2024-05-31T14:47:19.603836Z, duration: 1, exit-code: 0
git clone --depth 1 https://github.com/scverse/scanpy.git .
Cloning into '.'...

[rtd-command-info] start-time: 2024-05-31T14:47:19.668537Z, end-time: 2024-05-31T14:47:20.436982Z, duration: 0, exit-code: 0
git fetch origin --force --prune --prune-tags --depth 50 pull/3079/head:external-3079
From https://github.com/scverse/scanpy
 * [new ref]         refs/pull/3079/head -> external-3079

[rtd-command-info] start-time: 2024-05-31T14:47:20.566555Z, end-time: 2024-05-31T14:47:20.780604Z, duration: 0, exit-code: 0
git checkout --force 0a23d83e1aca5814f9ed884731198aee7524f139
Note: switching to '0a23d83e1aca5814f9ed884731198aee7524f139'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at 0a23d83 fmt

[rtd-command-info] start-time: 2024-05-31T14:47:20.858041Z, end-time: 2024-05-31T14:47:20.918270Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2024-05-31T14:47:21.007548Z, end-time: 2024-05-31T14:47:21.060166Z, duration: 0, exit-code: 0
cat .readthedocs.yml
version: 2
submodules:
  include: all
build:
  os: ubuntu-20.04
  tools:
    python: '3.12'
sphinx:
  fail_on_warning: true # do not change or you will be fired
  configuration: docs/conf.py
python:
  install:
  - method: pip
    path: .
    extra_requirements:
    - doc
    - leiden

[rtd-command-info] start-time: 2024-05-31T14:47:21.185845Z, end-time: 2024-05-31T14:47:21.265992Z, duration: 0, exit-code: 0
git submodule sync


[rtd-command-info] start-time: 2024-05-31T14:47:21.333422Z, end-time: 2024-05-31T14:47:34.967468Z, duration: 13, exit-code: 0
git submodule update --init --force --
Submodule 'notebooks' (https://github.com/scverse/scanpy-tutorials/) registered for path 'notebooks'
Cloning into '/home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/checkouts/3079/notebooks'...
Submodule path 'notebooks': checked out '02c4946e0be47e033355ef84b2a4909b302d2513'

[rtd-command-info] start-time: 2024-05-31T14:47:41.407738Z, end-time: 2024-05-31T14:47:41.487549Z, duration: 0, exit-code: 0
asdf global python 3.12.0


[rtd-command-info] start-time: 2024-05-31T14:47:41.895003Z, end-time: 2024-05-31T14:47:43.086089Z, duration: 1, exit-code: 0
python -mvirtualenv $READTHEDOCS_VIRTUALENV_PATH
created virtual environment CPython3.12.0.final.0-64 in 863ms
  creator CPython3Posix(dest=/home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/envs/3079, clear=False, no_vcs_ignore=False, global=False)
  seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/docs/.local/share/virtualenv)
    added seed packages: pip==23.1, setuptools==67.6.1, wheel==0.40.0
  activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator