Read the Docs build information Build id: 2214882 Project: icb-scanpy Version: 3048 Commit: 4eb348789dd46058e4a5d6ee68cf208f91795c59 Date: 2024-05-14T09:56:15.075609Z State: cancelled Success: False [rtd-command-info] start-time: 2024-05-14T09:56:16.307516Z, end-time: 2024-05-14T09:56:17.334402Z, duration: 1, exit-code: 0 git clone --depth 1 https://github.com/scverse/scanpy.git . Cloning into '.'... [rtd-command-info] start-time: 2024-05-14T09:56:17.459948Z, end-time: 2024-05-14T09:56:18.165220Z, duration: 0, exit-code: 0 git fetch origin --force --prune --prune-tags --depth 50 pull/3048/head:external-3048 From https://github.com/scverse/scanpy * [new ref] refs/pull/3048/head -> external-3048 [rtd-command-info] start-time: 2024-05-14T09:56:18.301037Z, end-time: 2024-05-14T09:56:18.510410Z, duration: 0, exit-code: 0 git checkout --force 4eb348789dd46058e4a5d6ee68cf208f91795c59 Note: switching to '4eb348789dd46058e4a5d6ee68cf208f91795c59'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 4eb3487 (fix): `worker_id` default [rtd-command-info] start-time: 2024-05-14T09:56:18.581060Z, end-time: 2024-05-14T09:56:18.643822Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2024-05-14T09:56:18.708061Z, end-time: 2024-05-14T09:56:18.770342Z, duration: 0, exit-code: 0 cat .readthedocs.yml version: 2 submodules: include: all build: os: ubuntu-20.04 tools: python: '3.12' sphinx: fail_on_warning: true # do not change or you will be fired configuration: docs/conf.py python: install: - method: pip path: . extra_requirements: - doc - leiden [rtd-command-info] start-time: 2024-05-14T09:56:18.899553Z, end-time: 2024-05-14T09:56:18.974890Z, duration: 0, exit-code: 0 git submodule sync [rtd-command-info] start-time: 2024-05-14T09:56:19.031145Z, end-time: 2024-05-14T09:56:32.928535Z, duration: 13, exit-code: 0 git submodule update --init --force -- Submodule 'notebooks' (https://github.com/scverse/scanpy-tutorials/) registered for path 'notebooks' Cloning into '/home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/checkouts/3048/notebooks'... Submodule path 'notebooks': checked out '02c4946e0be47e033355ef84b2a4909b302d2513' [rtd-command-info] start-time: 2024-05-14T09:56:40.395521Z, end-time: 2024-05-14T09:56:41.083274Z, duration: 0, exit-code: 0 asdf global python 3.12.0 [rtd-command-info] start-time: 2024-05-14T09:56:42.154386Z, end-time: 2024-05-14T09:56:44.273672Z, duration: 2, exit-code: 0 python -mvirtualenv $READTHEDOCS_VIRTUALENV_PATH created virtual environment CPython3.12.0.final.0-64 in 859ms creator CPython3Posix(dest=/home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/envs/3048, clear=False, no_vcs_ignore=False, global=False) seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/docs/.local/share/virtualenv) added seed packages: pip==23.1, setuptools==67.6.1, wheel==0.40.0 activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator [rtd-command-info] start-time: 2024-05-14T09:56:44.355999Z, end-time: 2024-05-14T09:56:57.112818Z, duration: 12, exit-code: 0 python -m pip install --upgrade --no-cache-dir pip setuptools Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/envs/3048/lib/python3.12/site-packages (23.1) Collecting pip Downloading pip-24.0-py3-none-any.whl (2.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.1/2.1 MB 36.5 MB/s eta 0:00:00 Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/envs/3048/lib/python3.12/site-packages (67.6.1) Collecting setuptools Downloading setuptools-69.5.1-py3-none-any.whl (894 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 894.6/894.6 kB 190.0 MB/s eta 0:00:00 Installing collected packages: setuptools, pip Attempting uninstall: setuptools Found existing installation: setuptools 67.6.1 Uninstalling setuptools-67.6.1: Successfully uninstalled setuptools-67.6.1 Attempting uninstall: pip Found existing installation: pip 23.1 Uninstalling pip-23.1: Successfully uninstalled pip-23.1 Successfully installed pip-24.0 setuptools-69.5.1