Read the Docs build information
Build id: 217562
Project: cyverse-learning-center-faq
Version: latest
Commit: 32a14dc9a3de025eda581bc04e9a4cc6024c3467
Date: 2019-06-19T16:08:38.742171Z
State: finished
Success: True


[rtd-command-info] start-time: 2019-06-19T16:08:39.149680Z, end-time: 2019-06-19T16:08:39.515101Z, duration: 0, exit-code: 0
git clone --no-single-branch --depth 50 https://github.com/CyVerse-learning-materials/learning-center-faq.git .
Cloning into '.'...

[rtd-command-info] start-time: 2019-06-19T16:08:39.685927Z, end-time: 2019-06-19T16:08:39.716483Z, duration: 0, exit-code: 0
git checkout --force origin/master
Note: checking out 'origin/master'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by performing another checkout.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -b with the checkout command again. Example:

  git checkout -b <new-branch-name>

HEAD is now at 32a14dc push the major faq pages

[rtd-command-info] start-time: 2019-06-19T16:08:39.799565Z, end-time: 2019-06-19T16:08:39.807276Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2019-06-19T16:08:40.692137Z, end-time: 2019-06-19T16:08:43.762717Z, duration: 3, exit-code: 0
python3.7 -mvirtualenv --no-site-packages --no-download 
Using base prefix '/home/docs/.pyenv/versions/3.7.1'
New python executable in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/envs/latest/bin/python3.7
Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/envs/latest/bin/python
Installing setuptools, pip, wheel...
done.

[rtd-command-info] start-time: 2019-06-19T16:08:43.829257Z, end-time: 2019-06-19T16:08:46.448898Z, duration: 2, exit-code: 0
python -m pip install --upgrade --cache-dir /home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/.cache/pip pip
Collecting pip
  Downloading https://files.pythonhosted.org/packages/5c/e0/be401c003291b56efc55aeba6a80ab790d3d4cece2778288d65323009420/pip-19.1.1-py2.py3-none-any.whl (1.4MB)
Installing collected packages: pip
  Found existing installation: pip 18.1
    Uninstalling pip-18.1:
      Successfully uninstalled pip-18.1
Successfully installed pip-19.1.1

[rtd-command-info] start-time: 2019-06-19T16:08:46.517423Z, end-time: 2019-06-19T16:08:57.082306Z, duration: 10, exit-code: 0
python -m pip install --upgrade --cache-dir /home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/.cache/pip Pygments==2.3.1 setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<0.6
Collecting Pygments==2.3.1
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Collecting setuptools==41.0.1
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Collecting docutils==0.14
  Downloading https://files.pythonhosted.org/packages/36/fa/08e9e6e0e3cbd1d362c3bbee8d01d0aedb2155c4ac112b19ef3cae8eed8d/docutils-0.14-py3-none-any.whl (543kB)
Collecting mock==1.0.1
  Downloading https://files.pythonhosted.org/packages/a2/52/7edcd94f0afb721a2d559a5b9aae8af4f8f2c79bc63fdbe8a8a6c9b23bbe/mock-1.0.1.tar.gz (818kB)
Collecting pillow==5.4.1
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Collecting alabaster!=0.7.5,<0.8,>=0.7
  Downloading https://files.pythonhosted.org/packages/10/ad/00b090d23a222943eb0eda509720a404f531a439e803f6538f35136cae9e/alabaster-0.7.12-py2.py3-none-any.whl
Collecting commonmark==0.8.1
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Collecting recommonmark==0.5.0
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Collecting sphinx<2
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Collecting sphinx-rtd-theme<0.5
  Downloading https://files.pythonhosted.org/packages/60/b4/4df37087a1d36755e3a3bfd2a30263f358d2dea21938240fa02313d45f51/sphinx_rtd_theme-0.4.3-py2.py3-none-any.whl (6.4MB)
Collecting readthedocs-sphinx-ext<0.6
  Downloading https://files.pythonhosted.org/packages/d1/f3/68de6af559ae681921a7b676a86c360454de67f3c8bd5327ae9352897ef4/readthedocs_sphinx_ext-0.5.17-py2.py3-none-any.whl
Collecting future (from commonmark==0.8.1)
  Downloading https://files.pythonhosted.org/packages/90/52/e20466b85000a181e1e144fd8305caf2cf475e2f9674e797b222f8105f5f/future-0.17.1.tar.gz (829kB)
Collecting six>=1.5 (from sphinx<2)
  Downloading https://files.pythonhosted.org/packages/73/fb/00a976f728d0d1fecfe898238ce23f502a721c0ac0ecfedb80e0d88c64e9/six-1.12.0-py2.py3-none-any.whl
Collecting sphinxcontrib-websupport (from sphinx<2)
  Downloading https://files.pythonhosted.org/packages/2a/59/d64bda9b7480a84a3569be4dde267c0f6675b255ba63b4c8e84469940457/sphinxcontrib_websupport-1.1.2-py2.py3-none-any.whl
Collecting Jinja2>=2.3 (from sphinx<2)
  Downloading https://files.pythonhosted.org/packages/1d/e7/fd8b501e7a6dfe492a433deb7b9d833d39ca74916fa8bc63dd1a4947a671/Jinja2-2.10.1-py2.py3-none-any.whl (124kB)
Collecting snowballstemmer>=1.1 (from sphinx<2)
  Downloading https://files.pythonhosted.org/packages/d4/6c/8a935e2c7b54a37714656d753e4187ee0631988184ed50c0cf6476858566/snowballstemmer-1.2.1-py2.py3-none-any.whl (64kB)
Collecting imagesize (from sphinx<2)
  Downloading https://files.pythonhosted.org/packages/fc/b6/aef66b4c52a6ad6ac18cf6ebc5731ed06d8c9ae4d3b2d9951f261150be67/imagesize-1.1.0-py2.py3-none-any.whl
Collecting requests>=2.0.0 (from sphinx<2)
  Downloading https://files.pythonhosted.org/packages/51/bd/23c926cd341ea6b7dd0b2a00aba99ae0f828be89d72b2190f27c11d4b7fb/requests-2.22.0-py2.py3-none-any.whl (57kB)
Collecting babel!=2.0,>=1.3 (from sphinx<2)
  Downloading https://files.pythonhosted.org/packages/2c/60/f2af68eb046c5de5b1fe6dd4743bf42c074f7141fe7b2737d3061533b093/Babel-2.7.0-py2.py3-none-any.whl (8.4MB)
Collecting packaging (from sphinx<2)
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Collecting MarkupSafe>=0.23 (from Jinja2>=2.3->sphinx<2)
  Downloading https://files.pythonhosted.org/packages/98/7b/ff284bd8c80654e471b769062a9b43cc5d03e7a615048d96f4619df8d420/MarkupSafe-1.1.1-cp37-cp37m-manylinux1_x86_64.whl
Collecting certifi>=2017.4.17 (from requests>=2.0.0->sphinx<2)
  Downloading https://files.pythonhosted.org/packages/69/1b/b853c7a9d4f6a6d00749e94eb6f3a041e342a885b87340b79c1ef73e3a78/certifi-2019.6.16-py2.py3-none-any.whl (157kB)
Collecting idna<2.9,>=2.5 (from requests>=2.0.0->sphinx<2)
  Downloading https://files.pythonhosted.org/packages/14/2c/cd551d81dbe15200be1cf41cd03869a46fe7226e7450af7a6545bfc474c9/idna-2.8-py2.py3-none-any.whl (58kB)
Collecting chardet<3.1.0,>=3.0.2 (from requests>=2.0.0->sphinx<2)
  Downloading https://files.pythonhosted.org/packages/bc/a9/01ffebfb562e4274b6487b4bb1ddec7ca55ec7510b22e4c51f14098443b8/chardet-3.0.4-py2.py3-none-any.whl (133kB)
Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 (from requests>=2.0.0->sphinx<2)
  Downloading https://files.pythonhosted.org/packages/e6/60/247f23a7121ae632d62811ba7f273d0e58972d75e58a94d329d51550a47d/urllib3-1.25.3-py2.py3-none-any.whl (150kB)
Collecting pytz>=2015.7 (from babel!=2.0,>=1.3->sphinx<2)
  Downloading https://files.pythonhosted.org/packages/3d/73/fe30c2daaaa0713420d0382b16fbb761409f532c56bdcc514bf7b6262bb6/pytz-2019.1-py2.py3-none-any.whl (510kB)
Collecting pyparsing>=2.0.2 (from packaging->sphinx<2)
  Downloading https://files.pythonhosted.org/packages/dd/d9/3ec19e966301a6e25769976999bd7bbe552016f0d32b577dc9d63d2e0c49/pyparsing-2.4.0-py2.py3-none-any.whl (62kB)
Building wheels for collected packages: mock, future
  Building wheel for mock (setup.py): started
  Building wheel for mock (setup.py): finished with status 'done'
  Stored in directory: /home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/.cache/pip/wheels/7e/72/92/744b532c779242b57aab4bcba80c312b30c069bbd60025e7e6
  Building wheel for future (setup.py): started
  Building wheel for future (setup.py): finished with status 'done'
  Stored in directory: /home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/.cache/pip/wheels/0c/61/d2/d6b7317325828fbb39ee6ad559dbe4664d0896da4721bf379e
Successfully built mock future
Installing collected packages: Pygments, setuptools, docutils, mock, pillow, alabaster, future, commonmark, six, sphinxcontrib-websupport, MarkupSafe, Jinja2, snowballstemmer, imagesize, certifi, idna, chardet, urllib3, requests, pytz, babel, pyparsing, packaging, sphinx, recommonmark, sphinx-rtd-theme, readthedocs-sphinx-ext
  Found existing installation: setuptools 40.6.3
    Uninstalling setuptools-40.6.3:
      Successfully uninstalled setuptools-40.6.3
Successfully installed Jinja2-2.10.1 MarkupSafe-1.1.1 Pygments-2.3.1 alabaster-0.7.12 babel-2.7.0 certifi-2019.6.16 chardet-3.0.4 commonmark-0.8.1 docutils-0.14 future-0.17.1 idna-2.8 imagesize-1.1.0 mock-1.0.1 packaging-19.0 pillow-5.4.1 pyparsing-2.4.0 pytz-2019.1 readthedocs-sphinx-ext-0.5.17 recommonmark-0.5.0 requests-2.22.0 setuptools-41.0.1 six-1.12.0 snowballstemmer-1.2.1 sphinx-1.8.5 sphinx-rtd-theme-0.4.3 sphinxcontrib-websupport-1.1.2 urllib3-1.25.3

[rtd-command-info] start-time: 2019-06-19T16:08:57.564525Z, end-time: 2019-06-19T16:08:57.872739Z, duration: 0, exit-code: 0
cat conf.py
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
#
# General information about the project.

import sys
import os
sys.path.insert(0, os.path.dirname(__file__))

from misc.cyverse_sphinx_conf import *  # noqa

project = 'CyVerse Learning Center FAQ'
copyright = '2019, CyVerse'
author = 'Jason Williams'
version = '1.0'
release = '1.0'

epub_title = project
epub_author = author
epub_publisher = author
epub_copyright = copyright




###########################################################################
#          auto-created readthedocs.org specific configuration            #
###########################################################################


#
# The following code was added during an automated build on readthedocs.org
# It is auto created and injected for every build. The result is based on the
# conf.py.tmpl file found in the readthedocs.org codebase:
# https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl
#


import importlib
import sys
import os.path
from six import string_types

from sphinx import version_info

# Get suffix for proper linking to GitHub
# This is deprecated in Sphinx 1.3+,
# as each page can have its own suffix
if globals().get('source_suffix', False):
    if isinstance(source_suffix, string_types):
        SUFFIX = source_suffix
    elif isinstance(source_suffix, (list, tuple)):
        # Sphinx >= 1.3 supports list/tuple to define multiple suffixes
        SUFFIX = source_suffix[0]
    elif isinstance(source_suffix, dict):
        # Sphinx >= 1.8 supports a mapping dictionary for mulitple suffixes
        SUFFIX = list(source_suffix.keys())[0]  # make a ``list()`` for py2/py3 compatibility
    else:
        # default to .rst
        SUFFIX = '.rst'
else:
    SUFFIX = '.rst'

# Add RTD Static Path. Add to the end because it overwrites previous files.
if not 'html_static_path' in globals():
    html_static_path = []
if os.path.exists('_static'):
    html_static_path.append('_static')

# Add RTD Theme only if they aren't overriding it already
using_rtd_theme = (
    (
        'html_theme' in globals() and
        html_theme in ['default'] and
        # Allow people to bail with a hack of having an html_style
        'html_style' not in globals()
    ) or 'html_theme' not in globals()
)
if using_rtd_theme:
    theme = importlib.import_module('sphinx_rtd_theme')
    html_theme = 'sphinx_rtd_theme'
    html_style = None
    html_theme_options = {}
    if 'html_theme_path' in globals():
        html_theme_path.append(theme.get_html_theme_path())
    else:
        html_theme_path = [theme.get_html_theme_path()]

if globals().get('websupport2_base_url', False):
    websupport2_base_url = 'https://readthedocs.com/websupport'
    websupport2_static_url = 'https://media.readthedocs.com/'


#Add project information to the template context.
context = {
    'using_theme': using_rtd_theme,
    'html_theme': html_theme,
    'current_version': "latest",
    'version_slug': "latest",
    'MEDIA_URL': "https://media.readthedocs.com/media/",
    'STATIC_URL': "https://media.readthedocs.com/",
    'PRODUCTION_DOMAIN': "readthedocs.com",
    'versions': [
    ("latest", "/en/latest/"),
    ],
    'downloads': [ 
    ("html", "//readthedocs.com/projects/cyverse-learning-center-faq/downloads/htmlzip/latest/"),
    ],
    'subprojects': [ 
    ],
    'slug': 'cyverse-learning-center-faq',
    'name': u'learning-center-faq',
    'rtd_language': u'en',
    'programming_language': u'words',
    'canonical_url': 'https://cyverse-learning-center-faq.readthedocs-hosted.com/en/latest/',
    'analytics_code': 'None',
    'single_version': False,
    'conf_py_path': '/',
    'api_host': 'https://readthedocs.com',
    'github_user': 'CyVerse-learning-materials',
    'github_repo': 'learning-center-faq',
    'github_version': 'master',
    'display_github': True,
    'bitbucket_user': 'None',
    'bitbucket_repo': 'None',
    'bitbucket_version': 'master',
    'display_bitbucket': False,
    'gitlab_user': 'None',
    'gitlab_repo': 'None',
    'gitlab_version': 'master',
    'display_gitlab': False,
    'READTHEDOCS': True,
    'using_theme': (html_theme == "default"),
    'new_theme': (html_theme == "sphinx_rtd_theme"),
    'source_suffix': SUFFIX,
    'ad_free': False,
    'user_analytics_code': '',
    'global_analytics_code': 'UA-17997319-2',
    'commit': '32a14dc9',
}




if 'html_context' in globals():
    
    html_context.update(context)
    
else:
    html_context = context

# Add custom RTD extension
if 'extensions' in globals():
    # Insert at the beginning because it can interfere
    # with other extensions.
    # See https://github.com/rtfd/readthedocs.org/pull/4054
    extensions.insert(0, "readthedocs_ext.readthedocs")
else:
    extensions = ["readthedocs_ext.readthedocs"]

project_language = 'en'

# User's Sphinx configurations
language_user = globals().get('language', None)
latex_engine_user = globals().get('latex_engine', None)
latex_elements_user = globals().get('latex_elements', None)

# Remove this once xindy gets installed in Docker image and XINDYOPS
# env variable is supported
# https://github.com/rtfd/readthedocs-docker-images/pull/98
latex_use_xindy = False

chinese = any([
    language_user in ('zh_CN', 'zh_TW'),
    project_language in ('zh_CN', 'zh_TW'),
])

japanese = any([
    language_user == 'ja',
    project_language == 'ja',
])

if chinese:
    latex_engine = latex_engine_user or 'xelatex'

    latex_elements_rtd = {
        'preamble': '\\usepackage[UTF8]{ctex}\n',
    }
    latex_elements = latex_elements_user or latex_elements_rtd
elif japanese:
    latex_engine = latex_engine_user or 'platex'

[rtd-command-info] start-time: 2019-06-19T16:08:57.933771Z, end-time: 2019-06-19T16:08:59.393235Z, duration: 1, exit-code: 0
python sphinx-build -T -E -b readthedocs -d _build/doctrees-readthedocs -D language=en . _build/html
Running Sphinx v1.8.5
loading translations [en]... done
making output directory...
building [mo]: targets for 0 po files that are out of date
building [readthedocs]: targets for 4 source files that are out of date
updating environment: 4 added, 0 changed, 0 removed
reading sources... [ 25%] Contributors_maintainers
reading sources... [ 50%] License
reading sources... [ 75%] README
reading sources... [100%] index

/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/envs/latest/lib/python3.7/site-packages/recommonmark/parser.py:65: UserWarning: Container node skipped: type=document
  warn("Container node skipped: type={0}".format(mdnode.t))
cyverse_rst_defined_substitutions.txt:103: WARNING: Unknown directive type "Comment".

.. Comment :: FAQ links
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/index.rst:14: WARNING: toctree contains reference to nonexisting document 'Discovery-environment-faq'
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/index.rst:14: WARNING: toctree contains reference to nonexisting document 'Cyverse-VICE-faq'
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/index.rst:14: WARNING: toctree contains reference to nonexisting document 'atmosphere-faq'
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/index.rst:14: WARNING: toctree contains reference to nonexisting document 'data-store-and-services-faq'
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/index.rst:14: WARNING: toctree contains reference to nonexisting document 'other-cyverse-services-faq'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... /home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/Contributors_maintainers.md: WARNING: document isn't included in any toctree
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/License.md: WARNING: document isn't included in any toctree
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/README.md: WARNING: document isn't included in any toctree
done
writing output... [ 25%] Contributors_maintainers
writing output... [ 50%] License
writing output... [ 75%] README
writing output... [100%] index

generating indices... genindex
writing additional pages... search
copying images... [ 33%] ./img/cyverse_rgb.png
copying images... [ 66%] ./img/homeicon.png
copying images... [100%] ./img/intercom.png

copying static files... WARNING: html_static_path entry '/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/_static' does not exist
done
copying readthedocs static files... done
copying searchtools... done
copying extra files... done
dumping search index in English (code: en) ... done
dumping object inventory... done
build succeeded, 10 warnings.

The HTML pages are in _build/html.

[rtd-command-info] start-time: 2019-06-19T16:08:59.479687Z, end-time: 2019-06-19T16:09:00.976559Z, duration: 1, exit-code: 0
python sphinx-build -T -b readthedocssinglehtmllocalmedia -d _build/doctrees-readthedocssinglehtmllocalmedia -D language=en . _build/localmedia
Running Sphinx v1.8.5
loading translations [en]... done
making output directory...
building [mo]: targets for 0 po files that are out of date
building [readthedocssinglehtmllocalmedia]: all documents
updating environment: 4 added, 0 changed, 0 removed
reading sources... [ 25%] Contributors_maintainers
reading sources... [ 50%] License
reading sources... [ 75%] README
reading sources... [100%] index

/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/envs/latest/lib/python3.7/site-packages/recommonmark/parser.py:65: UserWarning: Container node skipped: type=document
  warn("Container node skipped: type={0}".format(mdnode.t))
cyverse_rst_defined_substitutions.txt:103: WARNING: Unknown directive type "Comment".

.. Comment :: FAQ links
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/index.rst:14: WARNING: toctree contains reference to nonexisting document 'Discovery-environment-faq'
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/index.rst:14: WARNING: toctree contains reference to nonexisting document 'Cyverse-VICE-faq'
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/index.rst:14: WARNING: toctree contains reference to nonexisting document 'atmosphere-faq'
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/index.rst:14: WARNING: toctree contains reference to nonexisting document 'data-store-and-services-faq'
looking for now-outdated files... /home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/index.rst:14: WARNING: toctree contains reference to nonexisting document 'other-cyverse-services-faq'
none found
pickling environment... done
checking consistency... /home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/Contributors_maintainers.md: WARNING: document isn't included in any toctree
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/License.md: WARNING: document isn't included in any toctree
/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/README.md: WARNING: document isn't included in any toctree
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copying static files... WARNING: html_static_path entry '/home/docs/checkouts/readthedocs.org/user_builds/cyverse-learning-center-faq/checkouts/latest/_static' does not exist
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dumping object inventory... done
build succeeded, 10 warnings.

The HTML page is in _build/localmedia.