Read the Docs build information Build id: 2026840 Project: icb-scanpy Version: 2864 Commit: 4214f5adef71fcda2fc2d174666e8eca289524e1 Date: 2024-02-19T16:33:20.040125Z State: finished Success: False [rtd-command-info] start-time: 2024-02-19T16:33:22.599555Z, end-time: 2024-02-19T16:33:24.244270Z, duration: 1, exit-code: 0 git clone --depth 1 https://github.com/scverse/scanpy.git . Cloning into '.'... [rtd-command-info] start-time: 2024-02-19T16:33:24.343519Z, end-time: 2024-02-19T16:33:25.005339Z, duration: 0, exit-code: 0 git fetch origin --force --prune --prune-tags --depth 50 pull/2864/head:external-2864 From https://github.com/scverse/scanpy * [new ref] refs/pull/2864/head -> external-2864 [rtd-command-info] start-time: 2024-02-19T16:33:25.136305Z, end-time: 2024-02-19T16:33:25.351894Z, duration: 0, exit-code: 0 git checkout --force 4214f5adef71fcda2fc2d174666e8eca289524e1 Note: switching to '4214f5adef71fcda2fc2d174666e8eca289524e1'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 4214f5a Fix pandas warning [rtd-command-info] start-time: 2024-02-19T16:33:25.431860Z, end-time: 2024-02-19T16:33:25.499557Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2024-02-19T16:33:25.574865Z, end-time: 2024-02-19T16:33:25.634491Z, duration: 0, exit-code: 0 cat .readthedocs.yml version: 2 build: os: ubuntu-20.04 tools: python: '3.12' sphinx: fail_on_warning: true # do not change or you will be fired configuration: docs/conf.py python: install: - method: pip path: . extra_requirements: - doc - leiden [rtd-command-info] start-time: 2024-02-19T16:33:31.950700Z, end-time: 2024-02-19T16:33:32.035677Z, duration: 0, exit-code: 0 asdf global python 3.12.0 [rtd-command-info] start-time: 2024-02-19T16:33:32.462355Z, end-time: 2024-02-19T16:33:33.648608Z, duration: 1, exit-code: 0 python -mvirtualenv $READTHEDOCS_VIRTUALENV_PATH created virtual environment CPython3.12.0.final.0-64 in 853ms creator CPython3Posix(dest=/home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/envs/2864, clear=False, no_vcs_ignore=False, global=False) seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/docs/.local/share/virtualenv) added seed packages: pip==23.1, setuptools==67.6.1, wheel==0.40.0 activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator [rtd-command-info] start-time: 2024-02-19T16:33:33.730419Z, end-time: 2024-02-19T16:33:47.805975Z, duration: 14, exit-code: 0 python -m pip install --upgrade --no-cache-dir pip setuptools Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/icb-scanpy/envs/2864/lib/python3.12/site-packages (23.1) Collecting pip Downloading pip-24.0-py3-none-any.whl (2.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.1/2.1 MB 36.3 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