Read the Docs build information Build id: 183936 Project: d-wave-systems-penaltymodel Version: latest Commit: 2d010a6621df38e0f4c97228f3600a70ff6fe851 Date: 2019-02-15T17:58:31.252255Z State: finished Success: True [rtd-command-info] start-time: 2019-02-15T17:58:31.764314Z, end-time: 2019-02-15T17:58:32.109816Z, duration: 0, exit-code: 0 git clone --no-single-branch --depth 50 https://github.com/dwavesystems/penaltymodel.git . Cloning into '.'... [rtd-command-info] start-time: 2019-02-15T17:58:32.482676Z, end-time: 2019-02-15T17:58:32.494358Z, duration: 0, exit-code: 0 git checkout --force origin/master Note: checking out 'origin/master'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at 2d010a6 Merge pull request #82 from m3ller/feature/68-MIP-to-consider-multiple-energy-states [rtd-command-info] start-time: 2019-02-15T17:58:32.555985Z, end-time: 2019-02-15T17:58:32.562928Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2019-02-15T17:58:33.192543Z, end-time: 2019-02-15T17:58:36.332658Z, duration: 3, exit-code: 0 python3.7 -mvirtualenv --no-site-packages --no-download Using base prefix '/home/docs/.pyenv/versions/3.7.1' New python executable in /home/docs/checkouts/readthedocs.org/user_builds/d-wave-systems-penaltymodel/envs/latest/bin/python3.7 Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/d-wave-systems-penaltymodel/envs/latest/bin/python Installing setuptools, pip, wheel... done. 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requirements.txt (line 11)) (1.1.0) Requirement already satisfied: docutils>=0.11 in /home/docs/checkouts/readthedocs.org/user_builds/d-wave-systems-penaltymodel/envs/latest/lib/python3.7/site-packages (from sphinx->-r requirements.txt (line 11)) (0.13.1) Requirement already satisfied: MarkupSafe>=0.23 in /home/docs/checkouts/readthedocs.org/user_builds/d-wave-systems-penaltymodel/envs/latest/lib/python3.7/site-packages (from Jinja2>=2.3->sphinx->-r requirements.txt (line 11)) (1.1.0) Requirement already satisfied: pytz>=0a in /home/docs/checkouts/readthedocs.org/user_builds/d-wave-systems-penaltymodel/envs/latest/lib/python3.7/site-packages (from babel!=2.0,>=1.3->sphinx->-r requirements.txt (line 11)) (2018.9) Requirement already satisfied: idna<2.9,>=2.5 in /home/docs/checkouts/readthedocs.org/user_builds/d-wave-systems-penaltymodel/envs/latest/lib/python3.7/site-packages (from requests>=2.0.0->sphinx->-r requirements.txt (line 11)) (2.8) Requirement already satisfied: 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wheel for networkx (setup.py): started Building wheel for networkx (setup.py): finished with status 'done' Stored in directory: /home/docs/checkouts/readthedocs.org/user_builds/d-wave-systems-penaltymodel/.cache/pip/wheels/87/09/8b/4bbd744c97888c475862097465876a0f8fd0a5f35fd24fca4a Building wheel for pysmt (setup.py): started Building wheel for pysmt (setup.py): finished with status 'done' Stored in directory: /home/docs/checkouts/readthedocs.org/user_builds/d-wave-systems-penaltymodel/.cache/pip/wheels/eb/ac/9a/d6013815de71254ef06724cd046f5685a156fb84bd8f343c44 Successfully built networkx pysmt Installing collected packages: six, jsonschema, numpy, dimod, decorator, networkx, enum34, homebase, dwave-networkx, pysmt, protobuf, ortools, penaltymodel, penaltymodel-cache, dwavebinarycsp, scipy, coverage, codecov Found existing installation: six 1.12.0 Uninstalling six-1.12.0: Successfully uninstalled six-1.12.0 Successfully installed codecov-2.0.15 coverage-4.5.2 decorator-4.3.2 dimod-0.8.1 dwave-networkx-0.6.0 dwavebinarycsp-0.0.10 enum34-1.1.6 homebase-1.0.0 jsonschema-2.6.0 networkx-2.0 numpy-1.15.3 ortools-6.10.6025 penaltymodel-0.15.4 penaltymodel-cache-0.3.3 protobuf-3.6.1 pysmt-0.7.0 scipy-1.1.0 six-1.11.0 [rtd-command-info] start-time: 2019-02-15T17:59:20.331138Z, end-time: 2019-02-15T17:59:20.402989Z, duration: 0, exit-code: 0 cat docs/conf.py # -*- coding: utf-8 -*- # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. # # All configuration values have a default; values that are commented out # serve to show the default. # If extensions (or modules to document with autodoc) are in another directory, # add these directories to sys.path here. If the directory is relative to the # documentation root, use os.path.abspath to make it absolute, like shown here. # import os import sys # sys.path.insert(0, os.path.abspath('.')) home_path = os.path.dirname(os.path.dirname(os.path.abspath(__file__))) core_path = os.path.join(home_path, 'penaltymodel_core') cache_path = os.path.join(home_path, 'penaltymodel_cache') maxgap_path = os.path.join(home_path, 'penaltymodel_maxgap') sys.path.insert(0, home_path) sys.path.insert(0, core_path) sys.path.insert(0, cache_path) sys.path.insert(0, maxgap_path) # -- General configuration ------------------------------------------------ # If your documentation needs a minimal Sphinx version, state it here. # # needs_sphinx = '1.0' # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [ 'sphinx.ext.autosummary', 'sphinx.ext.autodoc', 'sphinx.ext.coverage', 'sphinx.ext.doctest', 'sphinx.ext.intersphinx', 'sphinx.ext.mathjax', 'sphinx.ext.napoleon', 'sphinx.ext.todo', 'sphinx.ext.viewcode', ] autosummary_generate = True # Add any paths that contain templates here, relative to this directory. # templates_path = ['_templates'] # The suffix(es) of source filenames. # You can specify multiple suffix as a list of string: # # source_suffix = ['.rst', '.md'] source_suffix = '.rst' # The master toctree document. master_doc = 'index' # General information about the project. project = u'Penalty Model' copyright = u'2018, D-Wave Systems Inc' author = u'D-Wave Systems Inc' # The version info for the project you're documenting, acts as replacement for # |version| and |release|, also used in various other places throughout the # built documents. # # import penaltymo # # The short X.Y version. # version = PROJECTNAME.package_info.__version__ # # The full version, including alpha/beta/rc tags. # release = PROJECTNAME.package_info.__version__ # The language for content autogenerated by Sphinx. Refer to documentation # for a list of supported languages. # # This is also used if you do content translation via gettext catalogs. # Usually you set "language" from the command line for these cases. language = None add_module_names = False # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. # This patterns also effect to html_static_path and html_extra_path exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store'] # The name of the Pygments (syntax highlighting) style to use. pygments_style = 'sphinx' # If true, `todo` and `todoList` produce output, else they produce nothing. todo_include_todos = True modindex_common_prefix = ['penaltymodel.'] doctest_global_setup = \ """ import penaltymodel.core as pm import penaltymodel.cache as pmc import penaltymodel.maxgap as maxgap """ # -- Options for HTML output ---------------------------------------------- # The theme to use for HTML and HTML Help pages. See the documentation for # a list of builtin themes. # import sphinx_rtd_theme html_theme = 'sphinx_rtd_theme' html_theme_path = [sphinx_rtd_theme.get_html_theme_path()] # Theme options are theme-specific and customize the look and feel of a theme # further. For a list of options available for each theme, see the # documentation. # # html_theme_options = {} # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css". html_static_path = ['_static'] # -- Options for HTMLHelp output ------------------------------------------ # Output file base name for HTML help builder. htmlhelp_basename = 'penaltymodeldoc' # -- Options for LaTeX output --------------------------------------------- latex_elements = { # The paper size ('letterpaper' or 'a4paper'). # # 'papersize': 'letterpaper', # The font size ('10pt', '11pt' or '12pt'). # # 'pointsize': '10pt', # Additional stuff for the LaTeX preamble. # # 'preamble': '', # Latex figure (float) alignment # # 'figure_align': 'htbp', } # Grouping the document tree into LaTeX files. List of tuples # (source start file, target name, title, # author, documentclass [howto, manual, or own class]). latex_documents = [ (master_doc, 'penaltymodel.tex', u'penaltymodel Documentation', u'D-Wave Systems Inc', 'manual'), ] # -- Options for manual page output --------------------------------------- # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ (master_doc, 'projectname', u'penaltymodel Documentation', [author], 1) ] # -- Options for Texinfo output ------------------------------------------- # Grouping the document tree into Texinfo files. List of tuples # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ (master_doc, 'penaltymodel', u'penaltymodel Documentation', author, 'penaltymodel', 'One line description of project.', 'Miscellaneous'), ] # -- Options for Epub output ---------------------------------------------- # Bibliographic Dublin Core info. epub_title = project epub_author = author epub_publisher = author epub_copyright = copyright # The unique identifier of the text. This can be a ISBN number # or the project homepage. # # epub_identifier = '' # A unique identification for the text. # # epub_uid = '' # A list of files that should not be packed into the epub file. epub_exclude_files = ['search.html'] # Configuration for intersphinx. intersphinx_mapping = {'python': ('https://docs.python.org/3', None), 'dimod': ('https://docs.ocean.dwavesys.com/projects/dimod/en/latest/', None), 'binarycsp': ('https://docs.ocean.dwavesys.com/projects/binarycsp/en/latest/', None), 'cloud-client': ('https://docs.ocean.dwavesys.com/projects/cloud-client/en/latest/', None), 'neal': ('https://docs.ocean.dwavesys.com/projects/neal/en/latest/', None), 'networkx': ('https://docs.ocean.dwavesys.com/projects/dwave-networkx/en/latest/', None), 'system': ('https://docs.ocean.dwavesys.com/projects/system/en/latest/', None), 'penaltymodel': ('https://docs.ocean.dwavesys.com/projects/penaltymodel/en/latest/', None), 'minorminer': ('https://docs.ocean.dwavesys.com/projects/minorminer/en/latest/', None), 'qbsolv': ('https://docs.ocean.dwavesys.com/projects/qbsolv/en/latest/', None), 'oceandocs': ('https://docs.ocean.dwavesys.com/en/latest/', None), 'sysdocs_gettingstarted': ('https://docs.dwavesys.com/docs/latest/', None)} ########################################################################### # auto-created readthedocs.org specific configuration # ########################################################################### # # The following code was added during an automated build on readthedocs.org # It is auto created and injected for every build. The result is based on the # conf.py.tmpl file found in the readthedocs.org codebase: # https://github.com/rtfd/readthedocs.org/blob/master/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl # import importlib import sys import os.path from six import string_types from sphinx import version_info # Get suffix for proper linking to GitHub # This is deprecated in Sphinx 1.3+, # as each page can have its own suffix if globals().get('source_suffix', False): if isinstance(source_suffix, string_types): SUFFIX = source_suffix elif isinstance(source_suffix, (list, tuple)): # Sphinx >= 1.3 supports list/tuple to define multiple suffixes SUFFIX = source_suffix[0] elif isinstance(source_suffix, dict): # Sphinx >= 1.8 supports a mapping dictionary for mulitple suffixes SUFFIX = list(source_suffix.keys())[0] # make a ``list()`` for py2/py3 compatibility else: # default to .rst SUFFIX = '.rst' else: SUFFIX = '.rst' # Add RTD Static Path. Add to the end because it overwrites previous files. if not 'html_static_path' in globals(): html_static_path = [] if os.path.exists('_static'): html_static_path.append('_static') # Add RTD Theme only if they aren't overriding it already using_rtd_theme = ( ( 'html_theme' in globals() and html_theme in ['default'] and # Allow people to bail with a hack of having an html_style 'html_style' not in globals() ) or 'html_theme' not in globals() ) if using_rtd_theme: theme = importlib.import_module('sphinx_rtd_theme') html_theme = 'sphinx_rtd_theme' html_style = None html_theme_options = {} if 'html_theme_path' in globals(): html_theme_path.append(theme.get_html_theme_path()) else: html_theme_path = [theme.get_html_theme_path()] if globals().get('websupport2_base_url', False): websupport2_base_url = 'https://readthedocs.com/websupport' websupport2_static_url = 'https://media.readthedocs.com/' #Add project information to the template context. context = { 'using_theme': using_rtd_theme, 'html_theme': html_theme, 'current_version': "latest", 'version_slug': "latest", 'MEDIA_URL': "https://media.readthedocs.com/media/", 'STATIC_URL': "https://media.readthedocs.com/", 'PRODUCTION_DOMAIN': "readthedocs.com", 'versions': [ ("latest", "/en/latest/"), ("stable", "/en/stable/"), ], 'downloads': [ ("pdf", "//readthedocs.com/projects/d-wave-systems-penaltymodel/downloads/pdf/latest/"), ("htmlzip", "//readthedocs.com/projects/d-wave-systems-penaltymodel/downloads/htmlzip/latest/"), ("epub", "//readthedocs.com/projects/d-wave-systems-penaltymodel/downloads/epub/latest/"), ], 'subprojects': [ ], 'slug': 'd-wave-systems-penaltymodel', 'name': u'penaltymodel', 'rtd_language': u'en', 'programming_language': u'words', 'canonical_url': 'https://docs.ocean.dwavesys.com/projects/penaltymodel/en/latest/', 'analytics_code': 'None', 'single_version': False, 'conf_py_path': '/docs/', 'api_host': 'https://readthedocs.com', 'github_user': 'dwavesystems', 'github_repo': 'penaltymodel', 'github_version': 'master', 'display_github': True, 'bitbucket_user': 'None', 'bitbucket_repo': 'None', 'bitbucket_version': 'master', 'display_bitbucket': False, 'gitlab_user': 'None', 'gitlab_repo': 'None', 'gitlab_version': 'master', 'display_gitlab': False, 'READTHEDOCS': True, 'using_theme': (html_theme == "default"), 'new_theme': (html_theme == "sphinx_rtd_theme"), 'source_suffix': SUFFIX, 'ad_free': False, 'user_analytics_code': '', 'global_analytics_code': 'UA-17997319-2', 'commit': '2d010a66', } if 'html_context' in globals(): html_context.update(context) else: html_context = context # Add custom RTD extension if 'extensions' in globals(): # Insert at the beginning because it can interfere # with other extensions. # See https://github.com/rtfd/readthedocs.org/pull/4054 extensions.insert(0, "readthedocs_ext.readthedocs") else: extensions = ["readthedocs_ext.readthedocs"] [rtd-command-info] start-time: 2019-02-15T17:59:20.470172Z, end-time: 2019-02-15T17:59:25.132336Z, duration: 4, exit-code: 0 python sphinx-build -T -E -b readthedocs -d _build/doctrees-readthedocs -D language=en . _build/html Running Sphinx v1.7.9 loading translations [en]... done making output directory... 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Generating output file penaltymodel.ind....done (95 lines written, 0 warnings). Output written in penaltymodel.ind. Transcript written in penaltymodel.ilg. [rtd-command-info] start-time: 2019-02-15T17:59:32.495161Z, end-time: 2019-02-15T17:59:33.075095Z, duration: 0, exit-code: 0 pdflatex -interaction=nonstopmode /home/docs/checkouts/readthedocs.org/user_builds/d-wave-systems-penaltymodel/checkouts/latest/docs/_build/latex/penaltymodel.tex This is pdfTeX, Version 3.14159265-2.6-1.40.18 (TeX Live 2017/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (/home/docs/checkouts/readthedocs.org/user_builds/d-wave-systems-penaltymodel/c heckouts/latest/docs/_build/latex/penaltymodel.tex LaTeX2e <2017-04-15> Babel <3.18> and hyphenation patterns for 84 language(s) loaded. 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(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) Overfull \hbox (1.67587pt too wide) in paragraph at lines 176--180 \T1/ptm/m/n/10 We get the fol-low-ing en-er-gies for each row in our truth ta-b le. [][][][][] [1] [2 <./73e56339931580fb66140286f509f05feec4552d.png> <./39535f6b00820580890b 61e6d198b5a8da0c5ed0.png>] Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) Underfull \hbox (badness 10000) in paragraph at lines 259--266 []\T1/pcr/b/n/10 feasible_configurations \T1/ptm/m/n/10 ([][]\T1/pcr/m/sl/10 di ct[][][[][]tuple[][][[][]int[][]], number]/ [3] Underfull \hbox (badness 10000) in paragraph at lines 285--293 []\T1/pcr/b/n/10 ising_linear_ranges \T1/ptm/m/n/10 ([][]\T1/pcr/m/sl/10 dict[] [][node, [number, number]], optional, Underfull \hbox (badness 10000) in paragraph at lines 295--305 []\T1/pcr/b/n/10 ising_quadratic_ranges \T1/ptm/m/n/10 ([][]\T1/pcr/m/sl/10 dic t[][][node, [][]dict[][][node, [number, [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 505--505 []\T1/ptm/m/it/10 graph\T1/ptm/m/n/10 , \T1/ptm/m/it/10 de-ci-sion_variables\T1 /ptm/m/n/10 , \T1/ptm/m/it/10 fea-si-ble_configurations\T1/ptm/m/n/10 , \T1/ptm /m/it/10 var- Underfull \hbox (badness 10000) in paragraph at lines 505--505 \T1/ptm/m/it/10 type\T1/ptm/m/n/10 , \T1/ptm/m/it/10 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get_penalty_model() (in mod-ule penal-ty- Underfull \hbox (badness 10000) in paragraph at lines 36--37 []\T1/ptm/m/n/10 get_penalty_model() (in mod-ule penal-ty- Underfull \hbox (badness 10000) in paragraph at lines 44--46 []\T1/ptm/m/n/10 insert_feasible_configurations() (in mod-ule penal-ty- Underfull \hbox (badness 10000) in paragraph at lines 46--47 []\T1/ptm/m/n/10 insert_graph() (in mod-ule penal-ty- Underfull \hbox (badness 10000) in paragraph at lines 47--48 []\T1/ptm/m/n/10 insert_ising_model() (in mod-ule penal-ty- Underfull \hbox (badness 10000) in paragraph at lines 48--49 []\T1/ptm/m/n/10 insert_penalty_model() (in mod-ule penal-ty- Underfull \hbox (badness 10000) in paragraph at lines 55--57 []\T1/ptm/m/n/10 iter_feasible_configurations() (in mod-ule penal-ty- Underfull \hbox (badness 10000) in paragraph at lines 57--58 []\T1/ptm/m/n/10 iter_graph() (in mod-ule penal-ty- Underfull \hbox (badness 10000) in paragraph at lines 58--59 []\T1/ptm/m/n/10 iter_ising_model() (in mod-ule penal-ty- Underfull \hbox (badness 10000) in paragraph at lines 59--61 []\T1/ptm/m/n/10 iter_penalty_model_from_specification() (in mod-ule Underfull \hbox (badness 10000) in paragraph at lines 70--71 []\T1/ptm/m/n/10 PenaltyModel (class in penal-ty- [33] Underfull \hbox (badness 10000) in paragraph at lines 80--81 []\T1/ptm/m/n/10 penaltymodel_factory() (in mod-ule penal-ty- Underfull \hbox (badness 10000) in paragraph at lines 89--90 []\T1/ptm/m/n/10 Specification (class in penal-ty- [34]) (./penaltymodel.aux) Package rerunfilecheck Warning: File `penaltymodel.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc} Output written on penaltymodel.pdf (38 pages, 260847 bytes). Transcript written on penaltymodel.log. 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