Read the Docs build information Build id: 1824379 Project: tiledb-inc-tiledb-py Version: latest Commit: e58600cb1fcdce7bfb6e39bce6c6175e9b3b676c Date: 2023-11-03T18:47:07.932187Z State: finished Success: False [rtd-command-info] start-time: 2023-11-03T18:47:09.100076Z, end-time: 2023-11-03T18:47:09.684246Z, duration: 0, exit-code: 0 git clone --depth 1 https://github.com/TileDB-Inc/TileDB-Py.git . Cloning into '.'... [rtd-command-info] start-time: 2023-11-03T18:47:09.769500Z, end-time: 2023-11-03T18:47:11.076863Z, duration: 1, exit-code: 0 git fetch origin --force --prune --prune-tags --depth 50 refs/heads/dev:refs/remotes/origin/dev From https://github.com/TileDB-Inc/TileDB-Py * [new tag] 0.22.2 -> 0.22.2 * [new tag] 0.22.3 -> 0.22.3 * [new tag] 0.23.0 -> 0.23.0 * [new tag] 0.23.1 -> 0.23.1 * [new tag] 0.23.2 -> 0.23.2 * [new tag] 0.23.3 -> 0.23.3 [rtd-command-info] start-time: 2023-11-03T18:47:11.204204Z, end-time: 2023-11-03T18:47:11.285388Z, duration: 0, exit-code: 0 git checkout --force origin/dev Note: switching to 'origin/dev'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at e58600c Release 0.23.4 Against 2.17.4 (#1861) [rtd-command-info] start-time: 2023-11-03T18:47:11.367892Z, end-time: 2023-11-03T18:47:11.423970Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2023-11-03T18:47:11.509092Z, end-time: 2023-11-03T18:47:11.571454Z, duration: 0, exit-code: 0 cat .readthedocs.yml # Don't build any extra formats formats: [] # Use RTD config version 2 # https://docs.readthedocs.io/en/stable/config-file/v2.html version: 2 # Set build OS to avoid build failures with old compiler build: os: "ubuntu-22.04" tools: python: "3.8" sphinx: configuration: doc/source/conf.py python: install: # this order is important: we need to get cmake - requirements: doc/requirements_doc.txt - method: setuptools path: . [rtd-command-info] start-time: 2023-11-03T18:47:17.213599Z, end-time: 2023-11-03T18:47:17.297589Z, duration: 0, exit-code: 0 asdf global python 3.8.18 [rtd-command-info] start-time: 2023-11-03T18:47:17.782858Z, end-time: 2023-11-03T18:47:18.940904Z, duration: 1, exit-code: 0 python -mvirtualenv $READTHEDOCS_VIRTUALENV_PATH created virtual environment CPython3.8.18.final.0-64 in 856ms creator CPython3Posix(dest=/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest, clear=False, no_vcs_ignore=False, global=False) seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/docs/.local/share/virtualenv) added seed packages: pip==23.1, setuptools==67.6.1, wheel==0.40.0 activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator [rtd-command-info] start-time: 2023-11-03T18:47:19.016660Z, end-time: 2023-11-03T18:47:30.221585Z, duration: 11, exit-code: 0 python -m pip 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typing_extensions-4.8.0-py3-none-any.whl.metadata (3.0 kB) Collecting tomli>=1 (from setuptools_scm>=1.5.4->-r doc/../requirements_dev.txt (line 10)) Downloading tomli-2.0.1-py3-none-any.whl (12 kB) Collecting iniconfig (from pytest->-r doc/../requirements_dev.txt (line 14)) Downloading iniconfig-2.0.0-py3-none-any.whl (5.9 kB) Collecting pluggy<2.0,>=0.12 (from pytest->-r doc/../requirements_dev.txt (line 14)) Downloading pluggy-1.3.0-py3-none-any.whl.metadata (4.3 kB) Collecting exceptiongroup>=1.0.0rc8 (from pytest->-r doc/../requirements_dev.txt (line 14)) Downloading exceptiongroup-1.1.3-py3-none-any.whl.metadata (6.1 kB) Downloading numpy-1.24.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (17.3 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 17.3/17.3 MB 75.4 MB/s eta 0:00:00 Downloading cmake-3.27.7-py2.py3-none-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (26.0 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 26.0/26.0 MB 154.8 MB/s eta 0:00:00 Downloading Cython-0.29.36-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (1.9 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.9/1.9 MB 217.2 MB/s eta 0:00:00 Downloading setuptools_scm-8.0.4-py3-none-any.whl (42 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 42.1/42.1 kB 178.3 MB/s eta 0:00:00 Downloading pytest-7.4.3-py3-none-any.whl (325 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 325.1/325.1 kB 253.2 MB/s eta 0:00:00 Downloading exceptiongroup-1.1.3-py3-none-any.whl (14 kB) Downloading pluggy-1.3.0-py3-none-any.whl (18 kB) Downloading typing_extensions-4.8.0-py3-none-any.whl (31 kB) Installing collected packages: cmake, typing-extensions, tomli, setuptools, pybind11, pluggy, numpy, jinja2, iniconfig, exceptiongroup, cython, setuptools_scm, pytest Attempting uninstall: setuptools Found existing installation: setuptools 68.2.2 Uninstalling setuptools-68.2.2: Successfully uninstalled setuptools-68.2.2 Attempting uninstall: jinja2 Found existing installation: Jinja2 3.1.2 Uninstalling Jinja2-3.1.2: Successfully uninstalled Jinja2-3.1.2 Successfully installed cmake-3.27.7 cython-0.29.36 exceptiongroup-1.1.3 iniconfig-2.0.0 jinja2-3.0.0 numpy-1.24.4 pluggy-1.3.0 pybind11-2.10.4 pytest-7.4.3 setuptools-58.3.0 setuptools_scm-8.0.4 tomli-2.0.1 typing-extensions-4.8.0 [rtd-command-info] start-time: 2023-11-03T18:47:46.698666Z, end-time: 2023-11-03T18:48:58.205876Z, duration: 71, exit-code: 1 python ./setup.py install --force /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.8/site-packages/setuptools/__init__.py:148: SetuptoolsDeprecationWarning: setup_requires is deprecated. Supply build dependencies using PEP 517 pyproject.toml build-requires. warnings.warn( /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.8/site-packages/setuptools_scm/_integration/setuptools.py:30: RuntimeWarning: ERROR: setuptools==58.3.0 is used in combination with setuptools_scm>=8.x Your build configuration is incomplete and previously worked by accident! setuptools_scm requires setuptools>=61 Suggested workaround if applicable: - migrating from the deprecated setup_requires mechanism to pep517/518 and using a pyproject.toml to declare build dependencies which are reliably pre-installed before running the build tools warnings.warn( WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' TILEDB_PATH from env: '' libtiledb_exists checking 'library_dirs': [] libtiledb_exists found: 'None' running install running bdist_egg GNU Make 4.3 Built for x86_64-pc-linux-gnu Copyright (C) 1988-2020 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. -- The C compiler identification is GNU 11.3.0 -- The CXX compiler identification is GNU 11.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Starting TileDB superbuild. -- Found Bzip2: /usr/lib/x86_64-linux-gnu/libbz2.so -- Could NOT find LZ4 (missing: LZ4_LIBRARIES LZ4_INCLUDE_DIR) -- Adding LZ4 as an external project -- Could NOT find spdlog (missing: spdlog_DIR) -- Adding spdlog as an external project -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Found Zstd: /usr/lib/x86_64-linux-gnu/libzstd.so -- Adding Magic as an external project -- Adding Webp as an external project -- Could NOT find CapnProto (missing: CapnProto_DIR) -- Cap'n Proto was not found -- Adding Capnp as an external project -- Found OpenSSL: /usr/lib/x86_64-linux-gnu/libcrypto.so (found suitable version "3.0.2", minimum required is "1.1.0") -- Found OpenSSL: /usr/lib/x86_64-linux-gnu/libssl.so -- Found OpenSSL crypto: /usr/lib/x86_64-linux-gnu/libcrypto.so -- OpenSSL Root: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/install;/usr/local/opt/openssl -- Could NOT find CURL (missing: CURL_LIBRARY CURL_INCLUDE_DIR) -- Could NOT find Curl (missing: CURL_LIBRARIES CURL_INCLUDE_DIR) -- Adding Curl as an external project CMake Warning at cmake/Modules/FindCurl_EP.cmake:122 (message): TileDB FindOpenSSL_EP did not set TILEDB_OPENSSL_DIR. Falling back to autotools detection. Call Stack (most recent call first): cmake/TileDB-Superbuild.cmake:128 (include) CMakeLists.txt:149 (include) CMake Warning at cmake/Modules/FindCurl_EP.cmake:134 (message): TileDB FindZlib_EP did not set TILEDB_ZLIB_DIR. Falling back to autotools detection. Call Stack (most recent call first): cmake/TileDB-Superbuild.cmake:128 (include) CMakeLists.txt:149 (include) CMake Warning at cmake/Modules/FindCurl_EP.cmake:150 (message): TileDB FindZstd_EP did not set TILEDB_ZSTD_DIR. Falling back to autotools detection. Call Stack (most recent call first): cmake/TileDB-Superbuild.cmake:128 (include) CMakeLists.txt:149 (include) -- Could NOT find AWSSDK (missing: AWSSDK_DIR) -- Could NOT find AWSSDK -- Adding AWSSDK as an external project -- Not found clang-tidy -- Not found clang-format -- was unable to find clang-format -- Found Doxygen: /usr/bin/doxygen (found version "1.9.1") found components: doxygen missing components: dot -- Install prefix is /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/dist -- Configuring done (0.9s) -- Generating done (0.0s) -- Build files have been written to: /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build [ 3%] Creating directories for 'ep_spdlog' [ 3%] Creating directories for 'ep_lz4' [ 6%] Performing download step (download, verify and extract) for 'ep_spdlog' [ 6%] Performing download step (download, verify and extract) for 'ep_lz4' -- ep_lz4 download command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_lz4-stamp/ep_lz4-download-*.log [ 7%] No update step for 'ep_lz4' -- ep_spdlog download command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_spdlog-stamp/ep_spdlog-download-*.log [ 9%] No update step for 'ep_spdlog' [ 10%] No patch step for 'ep_lz4' [ 12%] Performing patch step for 'ep_spdlog' [ 14%] Performing configure step for 'ep_lz4' patching file include/spdlog/logger-inl.h [ 15%] Performing configure step for 'ep_spdlog' -- ep_spdlog configure command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_spdlog-stamp/ep_spdlog-configure-*.log [ 17%] Performing build step for 'ep_spdlog' -- ep_lz4 configure command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_lz4-stamp/ep_lz4-configure-*.log [ 18%] Performing build step for 'ep_lz4' -- ep_lz4 build command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_lz4-stamp/ep_lz4-build-*.log [ 20%] Performing install step for 'ep_lz4' -- ep_lz4 install command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_lz4-stamp/ep_lz4-install-*.log [ 21%] Completed 'ep_lz4' [ 21%] Built target ep_lz4 [ 23%] Creating directories for 'ep_magic' [ 25%] Performing download step (git clone) for 'ep_magic' -- ep_magic download command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_magic-stamp/ep_magic-download-*.log [ 26%] No update step for 'ep_magic' [ 28%] No patch step for 'ep_magic' [ 29%] Performing configure step for 'ep_magic' -- ep_magic configure command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_magic-stamp/ep_magic-configure-*.log [ 31%] Performing build step for 'ep_magic' -- ep_spdlog build command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_spdlog-stamp/ep_spdlog-build-*.log [ 32%] Performing install step for 'ep_spdlog' -- ep_spdlog install command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_spdlog-stamp/ep_spdlog-install-*.log [ 34%] Completed 'ep_spdlog' [ 34%] Built target ep_spdlog [ 35%] Creating directories for 'ep_webp' [ 37%] Performing download step (git clone) for 'ep_webp' -- ep_webp download command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_webp-stamp/ep_webp-download-*.log [ 39%] No update step for 'ep_webp' [ 40%] No patch step for 'ep_webp' [ 42%] Performing configure step for 'ep_webp' -- ep_webp configure command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_webp-stamp/ep_webp-configure-*.log [ 43%] Performing build step for 'ep_webp' -- ep_magic build command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_magic-stamp/ep_magic-build-*.log [ 45%] Performing install step for 'ep_magic' -- ep_magic install command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_magic-stamp/ep_magic-install-*.log [ 46%] Completed 'ep_magic' [ 46%] Built target ep_magic [ 48%] Creating directories for 'ep_capnp' [ 50%] Performing download step (download, verify and extract) for 'ep_capnp' CMake Error at ep_capnp-stamp/ep_capnp-download-Release.cmake:37 (message): Command failed: 1 '/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.8/site-packages/cmake/data/bin/cmake' '-Dmake=' '-Dconfig=' '-P' '/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_capnp-stamp/ep_capnp-download-Release-impl.cmake' See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_capnp-stamp/ep_capnp-download-*.log -- stdout output is: -- Downloading... dst='/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_capnp.0.8.0.tar.gz' timeout='none' inactivity timeout='none' -- Using src='https://github.com/capnproto/capnproto/archive/v0.8.0.tar.gz' -- [download 0% complete] -- stderr output is: CMake Error at ep_capnp-stamp/download-ep_capnp.cmake:170 (message): Each download failed! error: downloading 'https://github.com/capnproto/capnproto/archive/v0.8.0.tar.gz' failed status_code: 22 status_string: "HTTP response code said error" log: --- LOG BEGIN --- timeout on name lookup is not supported Trying 192.30.255.113:443... Connected to github.com (192.30.255.113) port 443 (#0) ALPN: offers h2,http/1.1 [5 bytes data] TLSv1.3 (OUT), TLS handshake, Client hello (1): [512 bytes data] [5 bytes data] TLSv1.3 (IN), TLS handshake, Server hello (2): [122 bytes data] [5 bytes data] [5 bytes data] [1 bytes data] TLSv1.3 (IN), TLS handshake, Encrypted Extensions (8): [19 bytes data] [5 bytes data] [1 bytes data] TLSv1.3 (IN), TLS handshake, Certificate (11): [2459 bytes data] [5 bytes data] [1 bytes data] TLSv1.3 (IN), TLS handshake, CERT verify (15): [78 bytes data] [5 bytes data] [1 bytes data] TLSv1.3 (IN), TLS handshake, Finished (20): [36 bytes data] [5 bytes data] TLSv1.3 (OUT), TLS change cipher, Change cipher spec (1): [1 bytes data] [5 bytes data] [1 bytes data] TLSv1.3 (OUT), TLS handshake, Finished (20): [36 bytes data] SSL connection using TLSv1.3 / TLS_AES_128_GCM_SHA256 ALPN: server accepted h2 Server certificate: subject: C=US; ST=California; L=San Francisco; O=GitHub, Inc.; CN=github.com start date: Feb 14 00:00:00 2023 GMT expire date: Mar 14 23:59:59 2024 GMT subjectAltName: host "github.com" matched cert's "github.com" issuer: C=US; O=DigiCert Inc; CN=DigiCert TLS Hybrid ECC SHA384 2020 CA1 SSL certificate verify result: unable to get local issuer certificate (20), continuing anyway. [5 bytes data] [1 bytes data] using HTTP/2 h2 [:method: GET] h2 [:scheme: https] h2 [:authority: github.com] h2 [:path: /capnproto/capnproto/archive/v0.8.0.tar.gz] h2 [user-agent: curl/8.1.2] h2 [accept: */*] Using Stream ID: 1 (easy handle 0x1cac800) [5 bytes data] [1 bytes data] GET /capnproto/capnproto/archive/v0.8.0.tar.gz HTTP/2 Host: github.com User-Agent: curl/8.1.2 Accept: */* [5 bytes data] [1 bytes data] TLSv1.3 (IN), TLS handshake, Newsession Ticket (4): [57 bytes data] [5 bytes data] [1 bytes data] TLSv1.3 (IN), TLS handshake, Newsession Ticket (4): [57 bytes data] old SSL session ID is stale, removing [5 bytes data] [1 bytes data] [5 bytes data] [1 bytes data] [5 bytes data] [1 bytes data] HTTP/2 404 server: GitHub.com date: Fri, 03 Nov 2023 18:48:31 GMT content-type: text/plain; charset=utf-8 vary: X-PJAX, X-PJAX-Container, Turbo-Visit, Turbo-Frame, Accept-Encoding, Accept, X-Requested-With cache-control: no-cache strict-transport-security: max-age=31536000; includeSubdomains; preload x-frame-options: deny x-content-type-options: nosniff x-xss-protection: 0 referrer-policy: origin-when-cross-origin, strict-origin-when-cross-origin content-security-policy: default-src 'none'; base-uri 'self'; connect-src 'self'; form-action 'self'; img-src 'self' data:; script-src 'self'; style-src 'unsafe-inline' content-length: 9 x-github-request-id: B6BA:1E8F:1C3D8E:1D8F6B:65454090 The requested URL returned error: 404 Connection #0 to host github.com left intact --- LOG END --- CMake Error at ep_capnp-stamp/ep_capnp-download-Release-impl.cmake:9 (message): Command failed (1): '/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.8/site-packages/cmake/data/bin/cmake' '-P' '/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_capnp-stamp/download-ep_capnp.cmake' CMake Error at ep_capnp-stamp/ep_capnp-download-Release.cmake:47 (message): Stopping after outputting logs. make[2]: *** [CMakeFiles/ep_capnp.dir/build.make:99: externals/src/ep_capnp-stamp/ep_capnp-download] Error 1 make[1]: *** [CMakeFiles/Makefile2:205: CMakeFiles/ep_capnp.dir/all] Error 2 make[1]: *** Waiting for unfinished jobs.... -- ep_webp build command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_webp-stamp/ep_webp-build-*.log [ 51%] Performing install step for 'ep_webp' -- ep_webp install command succeeded. See also /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build/externals/src/ep_webp-stamp/ep_webp-install-*.log [ 53%] Completed 'ep_webp' [ 53%] Built target ep_webp make: *** [Makefile:91: all] Error 2 ext_modules: [, , ] tiledb_ext: main_ext: tiledb_cc_ext: tiledb_ext.library_dirs: [] libtiledb_exists checking 'library_dirs': [] libtiledb_exists found: 'None' Downloading TileDB package from 2.17.4... Building libtiledb in directory /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/build... CMake configure command: ['cmake', '-DCMAKE_INSTALL_PREFIX=/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4/dist', '-DTILEDB_TESTS=OFF', '-DTILEDB_S3=ON', '-DTILEDB_WERROR=OFF', '-DTILEDB_HDFS=ON', '-DTILEDB_INSTALL_LIBDIR=lib', '-DTILEDB_CPP_API=ON', '-DTILEDB_LOG_OUTPUT_ON_FAILURE=ON', '-DTILEDB_FORCE_ALL_DEPS:BOOL=OFF', '-DTILEDB_SERIALIZATION:BOOL=ON', '-DCMAKE_BUILD_TYPE=Release', '/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest/build/TileDB-2.17.4'] /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.8/site-packages/setuptools_scm/git.py:163: UserWarning: "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/checkouts/latest" is shallow and may cause errors warnings.warn(f'"{wd.path}" is shallow and may cause errors') /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.8/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( /home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.8/site-packages/setuptools/command/easy_install.py:156: EasyInstallDeprecationWarning: easy_install command is deprecated. Use build and pip and other standards-based tools. warnings.warn( Traceback (most recent call last): File "./setup.py", line 770, in setup( File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.8/site-packages/setuptools/__init__.py", line 159, in setup return distutils.core.setup(**attrs) File "/home/docs/.asdf/installs/python/3.8.18/lib/python3.8/distutils/core.py", line 148, in setup dist.run_commands() File "/home/docs/.asdf/installs/python/3.8.18/lib/python3.8/distutils/dist.py", line 966, in run_commands self.run_command(cmd) File "/home/docs/.asdf/installs/python/3.8.18/lib/python3.8/distutils/dist.py", line 985, in run_command cmd_obj.run() File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.8/site-packages/setuptools/command/install.py", line 74, in run self.do_egg_install() File "/home/docs/checkouts/readthedocs.org/user_builds/tiledb-inc-tiledb-py/envs/latest/lib/python3.8/site-packages/setuptools/command/install.py", line 116, in do_egg_install self.run_command('bdist_egg') File "/home/docs/.asdf/installs/python/3.8.18/lib/python3.8/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/home/docs/.asdf/installs/python/3.8.18/lib/python3.8/distutils/dist.py", line 985, in run_command cmd_obj.run() File "./setup.py", line 504, in run find_or_install_libtiledb(self) File "./setup.py", line 298, in find_or_install_libtiledb prefix_dir = build_libtiledb(src_dir) File "./setup.py", line 260, in build_libtiledb subprocess.check_call(build_cmd, cwd=libtiledb_build_dir) File "/home/docs/.asdf/installs/python/3.8.18/lib/python3.8/subprocess.py", line 364, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['make', '-j2']' returned non-zero exit status 2.