Read the Docs build information Build id: 1749843 Project: institute-for-disease-modeling-emodpy-typhoid Version: latest Commit: 09a7fcd3de4bb418151456373c58e10db4a7cb04 Date: 2023-09-28T21:06:22.717246Z State: finished Success: False [rtd-command-info] start-time: 2023-09-28T21:06:31.889654Z, end-time: 2023-09-28T21:06:32.451171Z, duration: 0, exit-code: 0 git clone --depth 1 https://github.com/InstituteforDiseaseModeling/emodpy-typhoid.git . Cloning into '.'... [rtd-command-info] start-time: 2023-09-28T21:06:33.022259Z, end-time: 2023-09-28T21:06:33.656557Z, duration: 0, exit-code: 0 git fetch origin --force --prune --prune-tags --depth 50 refs/heads/dev_branch_to_merge_back:refs/remotes/origin/dev_branch_to_merge_back From https://github.com/InstituteforDiseaseModeling/emodpy-typhoid * [new branch] dev_branch_to_merge_back -> origin/dev_branch_to_merge_back [rtd-command-info] start-time: 2023-09-28T21:06:34.221541Z, end-time: 2023-09-28T21:06:34.289891Z, duration: 0, exit-code: 0 git checkout --force origin/dev_branch_to_merge_back Note: switching to 'origin/dev_branch_to_merge_back'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 09a7fcd Merge pull request #11 from JSchripsema-IDM/dev_branch_to_merge_back [rtd-command-info] start-time: 2023-09-28T21:06:34.949851Z, end-time: 2023-09-28T21:06:35.009079Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2023-09-28T21:06:35.487792Z, end-time: 2023-09-28T21:06:35.549028Z, duration: 0, exit-code: 0 cat .readthedocs.yml # .readthedocs.yml # Read the Docs configuration file # See https://docs.readthedocs.io/en/stable/config-file/v2.html for details # Required version: 2 # Set the version of Python and other tools you might need build: os: ubuntu-20.04 tools: python: "3.9" # Build documentation in the docs/ directory with Sphinx sphinx: configuration: docs/conf.py fail_on_warning: true # Build documentation with MkDocs #mkdocs: # configuration: mkdocs.yml # Optionally build your docs in additional formats such as PDF formats: - htmlzip # Optionally set the version of Python and requirements required to build your docs python: install: - requirements: requirements.txt - requirements: docs/requirements.txt - method: setuptools path: . # Optionally rank topics in search results, between -10 (lower) and 10 (higher). # 0 is normal rank, not no rank # search: # ranking: [rtd-command-info] start-time: 2023-09-28T21:06:47.030052Z, end-time: 2023-09-28T21:06:48.948932Z, duration: 1, exit-code: 0 asdf global python 3.9.17 [rtd-command-info] start-time: 2023-09-28T21:06:50.589005Z, end-time: 2023-09-28T21:06:52.626623Z, duration: 2, exit-code: 0 python -mvirtualenv $READTHEDOCS_VIRTUALENV_PATH created virtual environment CPython3.9.17.final.0-64 in 535ms creator CPython3Posix(dest=/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-typhoid/envs/latest, clear=False, no_vcs_ignore=False, global=False) seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/docs/.local/share/virtualenv) added seed packages: pip==21.2.3, setuptools==57.4.0, wheel==0.37.0 activators BashActivator,CShellActivator,FishActivator,PowerShellActivator,PythonActivator [rtd-command-info] start-time: 2023-09-28T21:06:53.060052Z, end-time: 2023-09-28T21:07:07.423295Z, duration: 14, exit-code: 0 python -m pip install --upgrade --no-cache-dir pip setuptools Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-typhoid/envs/latest/lib/python3.9/site-packages (21.2.3) Collecting pip Downloading pip-23.2.1-py3-none-any.whl (2.1 MB) Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-typhoid/envs/latest/lib/python3.9/site-packages (57.4.0) Collecting setuptools Downloading setuptools-68.2.2-py3-none-any.whl (807 kB) Installing collected packages: setuptools, pip Attempting uninstall: setuptools Found existing installation: setuptools 57.4.0 Uninstalling setuptools-57.4.0: Successfully uninstalled setuptools-57.4.0 Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-23.2.1 setuptools-68.2.2 [rtd-command-info] start-time: 2023-09-28T21:07:07.996915Z, end-time: 2023-09-28T21:07:15.958771Z, duration: 7, exit-code: 0 python -m pip install --upgrade --no-cache-dir sphinx readthedocs-sphinx-ext Collecting sphinx Obtaining dependency information for sphinx from https://files.pythonhosted.org/packages/b2/b6/8ed35256aa530a9d3da15d20bdc0ba888d5364441bb50a5a83ee7827affe/sphinx-7.2.6-py3-none-any.whl.metadata Downloading sphinx-7.2.6-py3-none-any.whl.metadata (5.9 kB) Collecting readthedocs-sphinx-ext Obtaining dependency information for readthedocs-sphinx-ext from https://files.pythonhosted.org/packages/e3/bb/4adf12e9f4f6884135ccd662fdc0dd1008e73ea9be3c1a981ce0208467f7/readthedocs_sphinx_ext-2.2.3-py2.py3-none-any.whl.metadata Downloading readthedocs_sphinx_ext-2.2.3-py2.py3-none-any.whl.metadata (1.5 kB) Collecting sphinxcontrib-applehelp (from sphinx) Obtaining dependency information for sphinxcontrib-applehelp from https://files.pythonhosted.org/packages/c0/0c/261c0949083c0ac635853528bb0070c89e927841d4e533ba0b5563365c06/sphinxcontrib_applehelp-1.0.7-py3-none-any.whl.metadata Downloading sphinxcontrib_applehelp-1.0.7-py3-none-any.whl.metadata (2.2 kB) Collecting sphinxcontrib-devhelp (from sphinx) Obtaining dependency information for sphinxcontrib-devhelp from https://files.pythonhosted.org/packages/c0/03/010ac733ec7b7f71c1dc88e7115743ee466560d6d85373b56fb9916e4586/sphinxcontrib_devhelp-1.0.5-py3-none-any.whl.metadata Downloading sphinxcontrib_devhelp-1.0.5-py3-none-any.whl.metadata (2.2 kB) Collecting sphinxcontrib-jsmath (from sphinx) Downloading sphinxcontrib_jsmath-1.0.1-py2.py3-none-any.whl (5.1 kB) Collecting sphinxcontrib-htmlhelp>=2.0.0 (from sphinx) Obtaining dependency information for sphinxcontrib-htmlhelp>=2.0.0 from https://files.pythonhosted.org/packages/28/7a/958f8e3e6abe8219d0d1f1224886de847ab227b218f4a07b61bc337f64be/sphinxcontrib_htmlhelp-2.0.4-py3-none-any.whl.metadata Downloading sphinxcontrib_htmlhelp-2.0.4-py3-none-any.whl.metadata (2.2 kB) Collecting sphinxcontrib-serializinghtml>=1.1.9 (from sphinx) Obtaining dependency information for sphinxcontrib-serializinghtml>=1.1.9 from https://files.pythonhosted.org/packages/95/d6/2e0bda62b2a808070ac922d21a950aa2cb5e4fcfb87e5ff5f86bc43a2201/sphinxcontrib_serializinghtml-1.1.9-py3-none-any.whl.metadata Downloading sphinxcontrib_serializinghtml-1.1.9-py3-none-any.whl.metadata (2.3 kB) Collecting sphinxcontrib-qthelp (from sphinx) Obtaining dependency information for sphinxcontrib-qthelp from https://files.pythonhosted.org/packages/1f/e5/1850f3f118e95581c1e30b57028ac979badee1eb29e70ee72b0241f5a185/sphinxcontrib_qthelp-1.0.6-py3-none-any.whl.metadata Downloading sphinxcontrib_qthelp-1.0.6-py3-none-any.whl.metadata (2.2 kB) Collecting Jinja2>=3.0 (from sphinx) Downloading Jinja2-3.1.2-py3-none-any.whl (133 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 133.1/133.1 kB 9.4 MB/s eta 0:00:00 Collecting Pygments>=2.14 (from sphinx) Obtaining dependency information for Pygments>=2.14 from https://files.pythonhosted.org/packages/43/88/29adf0b44ba6ac85045e63734ae0997d3c58d8b1a91c914d240828d0d73d/Pygments-2.16.1-py3-none-any.whl.metadata Downloading Pygments-2.16.1-py3-none-any.whl.metadata (2.5 kB) Collecting docutils<0.21,>=0.18.1 (from sphinx) Obtaining dependency information for docutils<0.21,>=0.18.1 from https://files.pythonhosted.org/packages/26/87/f238c0670b94533ac0353a4e2a1a771a0cc73277b88bff23d3ae35a256c1/docutils-0.20.1-py3-none-any.whl.metadata Downloading docutils-0.20.1-py3-none-any.whl.metadata (2.8 kB) Collecting snowballstemmer>=2.0 (from sphinx) Downloading snowballstemmer-2.2.0-py2.py3-none-any.whl (93 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 93.0/93.0 kB 133.9 MB/s eta 0:00:00 Collecting babel>=2.9 (from sphinx) Downloading Babel-2.12.1-py3-none-any.whl (10.1 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.1/10.1 MB 102.9 MB/s eta 0:00:00 Collecting alabaster<0.8,>=0.7 (from sphinx) Downloading alabaster-0.7.13-py3-none-any.whl (13 kB) Collecting imagesize>=1.3 (from sphinx) Downloading imagesize-1.4.1-py2.py3-none-any.whl (8.8 kB) Collecting requests>=2.25.0 (from sphinx) Obtaining dependency information for requests>=2.25.0 from https://files.pythonhosted.org/packages/70/8e/0e2d847013cb52cd35b38c009bb167a1a26b2ce6cd6965bf26b47bc0bf44/requests-2.31.0-py3-none-any.whl.metadata Downloading requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting packaging>=21.0 (from sphinx) Downloading packaging-23.1-py3-none-any.whl (48 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 48.9/48.9 kB 128.1 MB/s eta 0:00:00 Collecting importlib-metadata>=4.8 (from sphinx) Obtaining dependency information for importlib-metadata>=4.8 from https://files.pythonhosted.org/packages/cc/37/db7ba97e676af155f5fcb1a35466f446eadc9104e25b83366e8088c9c926/importlib_metadata-6.8.0-py3-none-any.whl.metadata Downloading importlib_metadata-6.8.0-py3-none-any.whl.metadata (5.1 kB) Collecting zipp>=0.5 (from importlib-metadata>=4.8->sphinx) Obtaining dependency information for zipp>=0.5 from https://files.pythonhosted.org/packages/d9/66/48866fc6b158c81cc2bfecc04c480f105c6040e8b077bc54c634b4a67926/zipp-3.17.0-py3-none-any.whl.metadata Downloading zipp-3.17.0-py3-none-any.whl.metadata (3.7 kB) Collecting MarkupSafe>=2.0 (from Jinja2>=3.0->sphinx) Obtaining dependency information for MarkupSafe>=2.0 from https://files.pythonhosted.org/packages/de/63/cb7e71984e9159ec5f45b5e81e896c8bdd0e45fe3fc6ce02ab497f0d790e/MarkupSafe-2.1.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata Downloading MarkupSafe-2.1.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.25.0->sphinx) Obtaining dependency information for charset-normalizer<4,>=2 from https://files.pythonhosted.org/packages/f9/0d/514be8597d7a96243e5467a37d337b9399cec117a513fcf9328405d911c0/charset_normalizer-3.2.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata Downloading charset_normalizer-3.2.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (31 kB) Collecting idna<4,>=2.5 (from requests>=2.25.0->sphinx) Downloading idna-3.4-py3-none-any.whl (61 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 61.5/61.5 kB 119.6 MB/s eta 0:00:00 Collecting urllib3<3,>=1.21.1 (from requests>=2.25.0->sphinx) Obtaining dependency information for urllib3<3,>=1.21.1 from https://files.pythonhosted.org/packages/37/dc/399e63f5d1d96bb643404ee830657f4dfcf8503f5ba8fa3c6d465d0c57fe/urllib3-2.0.5-py3-none-any.whl.metadata Downloading urllib3-2.0.5-py3-none-any.whl.metadata (6.6 kB) Collecting certifi>=2017.4.17 (from requests>=2.25.0->sphinx) Obtaining dependency information for certifi>=2017.4.17 from https://files.pythonhosted.org/packages/4c/dd/2234eab22353ffc7d94e8d13177aaa050113286e93e7b40eae01fbf7c3d9/certifi-2023.7.22-py3-none-any.whl.metadata Downloading certifi-2023.7.22-py3-none-any.whl.metadata (2.2 kB) Downloading sphinx-7.2.6-py3-none-any.whl (3.2 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.2/3.2 MB 146.9 MB/s eta 0:00:00 Downloading readthedocs_sphinx_ext-2.2.3-py2.py3-none-any.whl (11 kB) Downloading docutils-0.20.1-py3-none-any.whl (572 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 572.7/572.7 kB 151.7 MB/s eta 0:00:00 Downloading importlib_metadata-6.8.0-py3-none-any.whl (22 kB) Downloading Pygments-2.16.1-py3-none-any.whl (1.2 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.2/1.2 MB 153.1 MB/s eta 0:00:00 Downloading requests-2.31.0-py3-none-any.whl (62 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 62.6/62.6 kB 130.5 MB/s eta 0:00:00 Downloading sphinxcontrib_htmlhelp-2.0.4-py3-none-any.whl (99 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 99.2/99.2 kB 134.8 MB/s eta 0:00:00 Downloading sphinxcontrib_serializinghtml-1.1.9-py3-none-any.whl (92 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 92.7/92.7 kB 124.9 MB/s eta 0:00:00 Downloading sphinxcontrib_applehelp-1.0.7-py3-none-any.whl (120 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 120.0/120.0 kB 143.0 MB/s eta 0:00:00 Downloading sphinxcontrib_devhelp-1.0.5-py3-none-any.whl (83 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 83.5/83.5 kB 129.9 MB/s eta 0:00:00 Downloading sphinxcontrib_qthelp-1.0.6-py3-none-any.whl (89 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 89.4/89.4 kB 146.9 MB/s eta 0:00:00 Downloading certifi-2023.7.22-py3-none-any.whl (158 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 158.3/158.3 kB 141.8 MB/s eta 0:00:00 Downloading charset_normalizer-3.2.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (202 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 202.1/202.1 kB 147.9 MB/s eta 0:00:00 Downloading MarkupSafe-2.1.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (25 kB) Downloading urllib3-2.0.5-py3-none-any.whl (123 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 123.8/123.8 kB 135.1 MB/s eta 0:00:00 Downloading zipp-3.17.0-py3-none-any.whl (7.4 kB) Installing collected packages: snowballstemmer, zipp, urllib3, sphinxcontrib-jsmath, Pygments, packaging, MarkupSafe, imagesize, idna, docutils, charset-normalizer, certifi, babel, alabaster, requests, Jinja2, importlib-metadata, readthedocs-sphinx-ext, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, sphinx Successfully installed Jinja2-3.1.2 MarkupSafe-2.1.3 Pygments-2.16.1 alabaster-0.7.13 babel-2.12.1 certifi-2023.7.22 charset-normalizer-3.2.0 docutils-0.20.1 idna-3.4 imagesize-1.4.1 importlib-metadata-6.8.0 packaging-23.1 readthedocs-sphinx-ext-2.2.3 requests-2.31.0 snowballstemmer-2.2.0 sphinx-7.2.6 sphinxcontrib-applehelp-1.0.7 sphinxcontrib-devhelp-1.0.5 sphinxcontrib-htmlhelp-2.0.4 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-1.0.6 sphinxcontrib-serializinghtml-1.1.9 urllib3-2.0.5 zipp-3.17.0 [rtd-command-info] start-time: 2023-09-28T21:07:16.435032Z, end-time: 2023-09-28T21:07:17.242918Z, duration: 0, exit-code: 1 python -m pip install --exists-action=w --no-cache-dir -r requirements.txt ERROR: Could not find a version that satisfies the requirement emodpy~=1.16 (from versions: none) ERROR: No matching distribution found for emodpy~=1.16