Read the Docs build information
Build id: 1509595
Project: icb-anndata
Version: 947
Commit: 41189283cba1331cbced7ac482e8bfe9aa03a2ca
Date: 2023-06-01T14:08:41.452210Z
State: cancelled
Success: False


[rtd-command-info] start-time: 2023-06-01T14:08:43.364199Z, end-time: 2023-06-01T14:08:44.307914Z, duration: 0, exit-code: 0
git clone --no-single-branch --depth 50 https://github.com/scverse/anndata.git .
Cloning into '.'...

[rtd-command-info] start-time: 2023-06-01T14:08:44.560865Z, end-time: 2023-06-01T14:08:45.114502Z, duration: 0, exit-code: 0
git fetch origin --force --tags --prune --prune-tags --depth 50 pull/947/head:external-947
From https://github.com/scverse/anndata
 * [new ref]         refs/pull/947/head -> external-947

[rtd-command-info] start-time: 2023-06-01T14:08:45.340326Z, end-time: 2023-06-01T14:08:45.425698Z, duration: 0, exit-code: 0
git checkout --force 41189283cba1331cbced7ac482e8bfe9aa03a2ca
Note: switching to '41189283cba1331cbced7ac482e8bfe9aa03a2ca'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at 4118928 (fix): efficient reading in of matrices by splitting up reading over different axes

[rtd-command-info] start-time: 2023-06-01T14:08:45.629247Z, end-time: 2023-06-01T14:08:45.691595Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2023-06-01T14:08:45.900149Z, end-time: 2023-06-01T14:08:45.979473Z, duration: 0, exit-code: 0
git submodule sync


[rtd-command-info] start-time: 2023-06-01T14:08:46.197952Z, end-time: 2023-06-01T14:08:46.777742Z, duration: 0, exit-code: 0
git submodule update --init --force --recursive docs/tutorials/notebooks
Submodule 'docs/tutorials/notebooks' (https://github.com/scverse/anndata-tutorials) registered for path 'docs/tutorials/notebooks'
Cloning into '/home/docs/checkouts/readthedocs.org/user_builds/icb-anndata/checkouts/947/docs/tutorials/notebooks'...
Submodule path 'docs/tutorials/notebooks': checked out '9e186c5c694793bb04ea1397721d154d6e0b7069'

[rtd-command-info] start-time: 2023-06-01T14:08:52.104540Z, end-time: 2023-06-01T14:08:52.196248Z, duration: 0, exit-code: 0
asdf global python 3.10.8


[rtd-command-info] start-time: 2023-06-01T14:08:52.703033Z, end-time: 2023-06-01T14:08:53.742817Z, duration: 1, exit-code: 0
python -mvirtualenv $READTHEDOCS_VIRTUALENV_PATH
created virtual environment CPython3.10.8.final.0-64 in 712ms
  creator CPython3Posix(dest=/home/docs/checkouts/readthedocs.org/user_builds/icb-anndata/envs/947, clear=False, no_vcs_ignore=False, global=False)
  seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/docs/.local/share/virtualenv)
    added seed packages: pip==21.2.3, setuptools==57.4.0, wheel==0.37.0
  activators BashActivator,CShellActivator,FishActivator,PowerShellActivator,PythonActivator

[rtd-command-info] start-time: 2023-06-01T14:08:53.929958Z, end-time: 2023-06-01T14:09:04.007006Z, duration: 10, exit-code: 0
python -m pip install --upgrade --no-cache-dir pip setuptools
Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/icb-anndata/envs/947/lib/python3.10/site-packages (21.2.3)
Collecting pip
  Downloading pip-23.1.2-py3-none-any.whl (2.1 MB)
Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/icb-anndata/envs/947/lib/python3.10/site-packages (57.4.0)
Collecting setuptools
  Downloading setuptools-67.8.0-py3-none-any.whl (1.1 MB)
Installing collected packages: setuptools, pip
  Attempting uninstall: setuptools
    Found existing installation: setuptools 57.4.0
    Uninstalling setuptools-57.4.0:
      Successfully uninstalled setuptools-57.4.0
  Attempting uninstall: pip
    Found existing installation: pip 21.2.3
    Uninstalling pip-21.2.3:
      Successfully uninstalled pip-21.2.3
Successfully installed pip-23.1.2 setuptools-67.8.0